BAC Information

Click to search

BAC

Clone NameB6Ng01-015K03
Chromosome7 (Build37)
Map Location 33,175,341 - 33,176,373
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373
Downstream geneEG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015K03.bB6Ng01-015K03.g
ACCDH849835DH849836
length1,0861,236
definitionDH849835|Mus musculus domesticus DNA, BAC clone: B6Ng01-015K03, 5' end.DH849836|Mus musculus domesticus DNA, BAC clone: B6Ng01-015K03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacctgaggaatactgaatggctaagaagcacctgaaaaaatg
ttgagcatgctcaatcatcagggaaatgcaaatcaaaacaatcctgagat
tccacctcacaccagtcagcactcttaagataaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagagaaagactcctccaatgttgttt
ggattgcaagctcgtacaaacactctggaaatcagtcatgctgttcctca
gaaaattggacatagaactaccatagaaccccacaatacccctgctgggc
atatatccagaagatgttccaaatggtaagaaggacatgtgcttcaccat
gttcatagcagccttatttataatgtccagaagctggaaagaacacagat
atctctcaaaagaggcatatatgcctcagtacaagggaatgccagggcca
agatgtaggagtgggtgactaggggactgggcaggcgggtatgggtgact
ttttggatggcattggaaatataaatgatgaaaatatataataacatttt
gaaaaaaaatgaacatgaatgaaagactgtgttcttacaacttacagaag
aattccagaggatctgtagatgttacttctgggaattgatttccctccag
tcaaaagacccaagacaaggtaatgtatttgggaaagaggttaatttgct
tcatgatctgaaatgttgaaagtcaagatagggcaaactcaggttgccag
ggacttgtaaagtctgatcccagggtacacagcagaaagttacctgggga
ttgtagaagacagagcagagactccacgctgcttctcaagcacccatgat
atgctcactgaccaggcctgccacaatggggatcagtactcaatgtgggt
attggtgtgttcctcatacatgttaatgcatagtggcccttcttcggaca
tttttttttttttcaagactggtatttaggagacaattaccagaaaggtg
gaaaaaaagtgtgttaggccattatggcagaacatatgaaggccctgttt
ttgcttgggcacaccttacagagaaagggtgcatac
gaattccaggtcacaatgagaaaacgaaacctatggataataggagtaga
tgaaaatgaagattttcaaattaaagggccagcaaatatcatcaacaaga
ttatagaagaaaacttcccaaacctaaaaaaagagatgcccatgaacata
caagaagcctacagaactccaaatagactggaacagaagagaaattcctc
ctgacacataataatcagaacaacaaatgcagtaaataaagacagagtat
taaaaacagaaagggaaaagagtcaaacgaaataaaaaggcaaacctatt
agaattacaccagacttctcatcagagactataaaatctacatgatcctc
gacagatgttatacagactcgaagagaatccaaatgcaaacccaggctaa
tatacccatcaaaagtctcaattaccgtatatggagaaaccaaagtattc
catgccaaaaccaaattcacacaatatctttgcaccaatccagcccttca
aagggtaatacagagaaaactgcaatacaaggatggaaattatgccctat
agaaagcaagaaaataatccttcaatgatcctaaaagaagacagccctaa
gaacagaaccccaactcttacaacaaaaataacaagaagcaacaaacttt
tccttaatatctcttaataccaatgtactcaattccccagtaaaaagaca
tagactaaaagattggctataaaaacaggtcccaacattatgctgcatga
gggaaacccatctcagggacaaattcacatactacctgagactaaaaggc
tggaaaacaattttcctaggaaatggtctgaagaaacaagctagtgtaac
cattctaacaacgaataaaatcgacttcgaaacaaaattatcaaaaaaga
caaggaaggacactttatattaatcaaagttaaaaattcctagatgaagt
ctcattgtgaatgtctgtgctcaaacacagggcatcacattcactatgga
aactttagtaagctcaaagcacacattgcacctcactcatatattgggag
actcacacccatactctcagcattggtagaccctggaaacgaaactagac
gagacaatgcaactatcaattatgaaagacatggatttaacagattctga
cgtttctaacaatgggatatactctttcaacctatgtacctctcatggac
atttattgttccaaaacgcctcgcagatccataaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33175341_33176373
seq2: B6Ng01-015K03.b_102_1128

seq1  CTCAATCATCAGGGAAATGCAAATCAAAACAATCCTGAGATTCCACCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATCATCAGGGAAATGCAAATCAAAACAATCCTGAGATTCCACCTCA  50

seq1  CACCAGTCAGCACTCTTAAGATAAAAAATTCAGGTGACAGCAGATGCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTCAGCACTCTTAAGATAAAAAATTCAGGTGACAGCAGATGCTGG  100

seq1  TGAGGATGTGGAGAAAGAGAAAGACTCCTCCAATGTTGTTTGGATTGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATGTGGAGAAAGAGAAAGACTCCTCCAATGTTGTTTGGATTGCAA  150

seq1  GCTCGTACAAACACTCTGGAAATCAGTCATGCTGTTCCTCAGAAAATTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTACAAACACTCTGGAAATCAGTCATGCTGTTCCTCAGAAAATTGG  200

seq1  ACATAGAACTACCATAGAACCCCACAATACCCCTGCTGGGCATATATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAACTACCATAGAACCCCACAATACCCCTGCTGGGCATATATCCA  250

seq1  GAAGATGTTCCAAATGGTAAGAAGGACATGTGCTTCACCATGTTCATAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGTTCCAAATGGTAAGAAGGACATGTGCTTCACCATGTTCATAGC  300

seq1  AGCCTTATTTATAATGTCCAGAAGCTGGAAAGAACACAGATATCTCTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTATTTATAATGTCCAGAAGCTGGAAAGAACACAGATATCTCTCAA  350

seq1  AAGAGGCATATATGCCTCAGTACAAGGGAATGCCAGGGCCAAGATGTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCATATATGCCTCAGTACAAGGGAATGCCAGGGCCAAGATGTAGG  400

seq1  AGTGGGTGACTAGGGGACTGGGCAGGCGGGTATGGGTGACTTTTTGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTGACTAGGGGACTGGGCAGGCGGGTATGGGTGACTTTTTGGATG  450

seq1  GCATTGGAAATATAAATGATGAAAATATATAATAACATTTTGAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGAAATATAAATGATGAAAATATATAATAACATTTTGAAAAAAAA  500

seq1  TGAACATGAATGAAAGACTGTGTTCTTACAACTTACAGAAGAATTCCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATGAATGAAAGACTGTGTTCTTACAACTTACAGAAGAATTCCAGA  550

seq1  GGATCTGTAGATGTTACTTCTGGGAATTGATTTCCCTCCAGTCAAAAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGTAGATGTTACTTCTGGGAATTGATTTCCCTCCAGTCAAAAGAC  600

seq1  CCAAGACAAGGTAATGTATTTGGGAAAGAGGTTAATTTGCTTCATGATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGACAAGGTAATGTATTTGGGAAAGAGGTTAATTTGCTTCATGATCT  650

seq1  GAAATGTTGAAAGTCAAGATAGGGCAAACTCAGGTTGCCAGGGACTTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTTGAAAGTCAAGATAGGGCAAACTCAGGTTGCCAGGGACTTGTA  700

seq1  AAGTCTGATCCCAGGGTACACAGCAGAAGGTTACCTGGGGATTGTAGAAG  750
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAGTCTGATCCCAGGGTACACAGCAGAAAGTTACCTGGGGATTGTAGAAG  750

seq1  ACAGAGCAGAGACTCCACGCTGCTTCTCAAGCACCCATGATATGCTCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCAGAGACTCCACGCTGCTTCTCAAGCACCCATGATATGCTCACT  800

seq1  GACCAGGCCTGCCACAATGGGGATCAGTACTCAATGTGGGTATTGGTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGCCTGCCACAATGGGGATCAGTACTCAATGTGGGTATTGGTGTG  850

seq1  TTCCTCATACATGTTAATGCATAGGTGGCCCTTCCTTCGGACATTTTTTT  900
      ||||||||||||||||||||||| ||||||||| ||||||||||||||||
seq2  TTCCTCATACATGTTAATGCATA-GTGGCCCTT-CTTCGGACATTTTTTT  898

seq1  TTTATGC-AGACTGGGTATTTAGGAGACAAATTACCCAGACAGGTGGAGA  949
      ||| | | ||||| |||||||||||||| ||||| ||||| ||||||| |
seq2  TTTTTTCAAGACT-GGTATTTAGGAGAC-AATTA-CCAGAAAGGTGGAAA  945

seq1  AAAAGTGTTTTAGGCAATGAGGGCAGAGCATATGAAGGCCCTGGTTTTTG  999
      |||||||| |||||| || | |||||| |||||||||||||| |||||||
seq2  AAAAGTGTGTTAGGCCATTATGGCAGAACATATGAAGGCCCT-GTTTTTG  994

seq1  CTTGTGTCACA-CTTACAGAGAAAGGGTGCCATAC  1033
      |||| | |||| ||||||||||||||||| |||||
seq2  CTTG-GGCACACCTTACAGAGAAAGGGTG-CATAC  1027