BAC Information

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BAC

Clone NameB6Ng01-015K06
Chromosome7 (Build37)
Map Location 61,477,989 - 61,573,780
singlet/doubletdoublet
Overlap genenone
Upstream geneGm1865, LOC100040718, LOC668789
Downstream geneMrps33p, LOC622146, Luzp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015K06.bB6Ng01-015K06.g
ACCDH849841DH849842
length1,0821,112
definitionDH849841|Mus musculus domesticus DNA, BAC clone: B6Ng01-015K06, 5' end.DH849842|Mus musculus domesticus DNA, BAC clone: B6Ng01-015K06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,572,696 - 61,573,780)(61,477,989 - 61,479,117)
sequence
gaattctggtgtggacctactgacaccagcagacaattaaaagcatccat
tccctgcctgctggatagaaaacatgtgtatacctttgaggagaaaaact
gccaatataaaatatttggtttctatagtacctatctgtaagcacaagga
cctcgtattctgtagttaatgactcatgtactcttatatgatgtattgca
ttgctagtttatagtctttctttagtttagagataactttaacaattacg
tgatgatgtgacaatcatatgagcaccagccttatgaatcatgtgttgat
cctgtctatagatcagtgtttttcactggtgtctcatttaatttcctact
atttaattttctctggatctagatgcagaattagtgcagtaggtgactga
atatatgtcacagactcatacaaacatatattgaatgtttgacgtgttgt
accataaaggcatacatagatgtactctatgatacttctacaataaacat
cttgcattcattccctaagtagtactcatgagtaagttgtaactaaatgg
taactgcctgtaaatataatacgactgtgtaagcattgtgggaaaattga
aaagtacaaaagagagacagaaactcttctaaatcatagtgaatcaaaag
cattttcagtagtagaagtatgcttataggatcatttaatgagatgagaa
gaattatattagcaaggaaattgtttttattaaaaataattatactttcc
tcagtaactacaataatttttaaaaatatagctatatgtatgttatacaa
aattgaaatggatatttttgtgagatacatgggaagagttgtagtagact
atggactttagattttaaagatgttgggtggttgagaagccaatgtcatc
agaagaattgacaatgctaatcctgtactattttccagcagttcaaagtt
attatttaagttgtgaatattcactttatcatatttttgatctctcatca
ccagttcttaaattccgcatttaatcaacaggatcattttatattctttc
tgtacaagtatgttaatgttaattggggatta
gaattctacagtgtgtctacattacataaatgtgaaactcgaagtgccag
aaaaataagtaacaatgttagctacaaaggaaaagttaaaatactggctc
gatattaaaacaattcaaatatttacttctctttctattcctttttaaaa
cagtttttttttaaaccaagaaatgattttcaagttattaggaagaacta
gatctgtgaaaatattacagcataatataaatttagaaagacttatagga
atctatgtgaaaatgaaaacaatgtatagatataaatagtgataatattt
tcagtactgtaaaggtctccccactcctctctatagagcattggctctcc
tggtgctgggacacatgtgtgaggaatccgaatgaccgcatggatcagaa
ttcctgccctctacagaaacagctaaagctcttaactgctgagacatctt
tccaaccctcaactctttatcatatattctatatagaattaataattaga
taactgtagcttttaaaaagtgttctaccagtactctgtgcctcggtata
ttacttagactcaactaagtttcaaataatttttggcagcattattacaa
agaatttctagtgaaaactatcaggttatcttttcaatgacttgaagatg
aaactttaattaaatatattatgattttttttctacttaagaagatgtga
aatgaaaactccaaatttatccctgaacatggttatattaaacatttgca
gaggataagaatcatttacagacatgctagagaacattaatttaacttca
cccagagaaaggaataatctacttactaccttcagagcagtatattttct
atacttcccttggcagccagctgccaggaccaataaactctatgagtatg
catgagctgaaggagaggcagaaactccagtactgtggagtctgactgtg
ctgtctcctgctcaagtctaagtctcacattgttgtagcattgagaatgc
ttcagtatcccaaatgcatctgtggaacatgggatgctatacttggtgtt
ctaaagctaggagtgtgacgattccagacccagccatatacctagtgatt
ttttgcattgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_61572696_61573780
seq2: B6Ng01-015K06.b_43_1124 (reverse)

seq1  TATTCCCCAATTAACATTAACATATCTTGTACAAGAAGAATAT-AAATGA  49
      || ||||||||||||||||||||| ||||||||  |||||||| ||||||
seq2  TAATCCCCAATTAACATTAACATA-CTTGTACAGAAAGAATATAAAATGA  49

seq1  TCTTGTAGATTAAATGCTGAAATTTAAGAACTGGGATGATGAGAGATCAA  99
      || ||| |||||||||| | ||||||||||||||  ||||||||||||||
seq2  TCCTGTTGATTAAATGC-GGAATTTAAGAACTGG--TGATGAGAGATCAA  96

seq1  AAATATGATAAAGTGAATA-TCACAACTTAAATAATAACTTTGAACTTGC  148
      ||||||||||||||||||| |||||||||||||||||||||||||| |||
seq2  AAATATGATAAAGTGAATATTCACAACTTAAATAATAACTTTGAAC-TGC  145

seq1  TTGGAAAATAGTACAGGATTAGCATTGTCAA-TCTTCTGATGACATTGGC  197
       |||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  -TGGAAAATAGTACAGGATTAGCATTGTCAATTCTTCTGATGACATTGGC  194

seq1  TTCTCAACCACCCAACATCTTTAAAATCTAAAGTCCATAGTCTACTACAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAACCACCCAACATCTTTAAAATCTAAAGTCCATAGTCTACTACAA  244

seq1  CTCTT-CCATGTATCTCACAAAAATATCCATTTCAATTTTTGTATAACAT  296
      ||||| |||||||||||||||||||||||||||||| |||||||||||||
seq2  CTCTTCCCATGTATCTCACAAAAATATCCATTTCAA-TTTTGTATAACAT  293

seq1  ACATATAGCTATATTTTTAAAAATTATTGTAGTTACTGAGGAAAGTATAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAGCTATATTTTTAAAAATTATTGTAGTTACTGAGGAAAGTATAA  343

seq1  TTATTTTTAATAAAAACAATTTCCTTGCTAATATAATTCTTCTCATCTCA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTAATAAAAACAATTTCCTTGCTAATATAATTCTTCTCATCTCA  393

seq1  TTAAATGATCCTATAAGCATACTTCTACTACTGAAAATGCTTTTGATTCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGATCCTATAAGCATACTTCTACTACTGAAAATGCTTTTGATTCA  443

seq1  CTATGATTTAGAAGAGTTTCTGTCTCTCTTTTGTACTTTTCAATTTTCCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGATTTAGAAGAGTTTCTGTCTCTCTTTTGTACTTTTCAATTTTCCC  493

seq1  ACAATGCTTACACAGTCGTATTATATTTACAGGCAGTTACCATTTAGTTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTTACACAGTCGTATTATATTTACAGGCAGTTACCATTTAGTTA  543

seq1  CAACTTACTCATGAGTACTACTTAGGGAATGAATGCAAGATGTTTATTGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTACTCATGAGTACTACTTAGGGAATGAATGCAAGATGTTTATTGT  593

seq1  AGAAGTATCATAGAGTACATCTATGTATGCCTTTATGGTACAACACGTCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTATCATAGAGTACATCTATGTATGCCTTTATGGTACAACACGTCA  643

seq1  AACATTCAATATATGTTTGTATGAGTCTGTGACATATATTCAGTCACCTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCAATATATGTTTGTATGAGTCTGTGACATATATTCAGTCACCTA  693

seq1  CTGCACTAATTCTGCATCTAGATCCAGAGAAAATTAAATAGTAGGAAATT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTAATTCTGCATCTAGATCCAGAGAAAATTAAATAGTAGGAAATT  743

seq1  AAATGAGACACCAGTGAAAAACACTGATCTATAGACAGGATCAACACATG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGACACCAGTGAAAAACACTGATCTATAGACAGGATCAACACATG  793

seq1  ATTCATAAGGCTGGTGCTCATATGATTGTCACATCATCACGTAATTGTTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAAGGCTGGTGCTCATATGATTGTCACATCATCACGTAATTGTTA  843

seq1  AAGTTATCTCTAAACTAAAGAAAGACTATAAACTAGCAATGCAATACATC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATCTCTAAACTAAAGAAAGACTATAAACTAGCAATGCAATACATC  893

seq1  ATATAAGAGTACATGAGTCATTAACTACAGAATACGAGGTCCTTGTGCTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGAGTACATGAGTCATTAACTACAGAATACGAGGTCCTTGTGCTT  943

seq1  ACAGATAGGTACTATAGAAACCAAATATTTTATATTGGCAGTTTTTCTCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATAGGTACTATAGAAACCAAATATTTTATATTGGCAGTTTTTCTCC  993

seq1  TCAAAGGTATACACATGTTTTCTATCCAGCAGGCAGGGAATGGATGCTTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGTATACACATGTTTTCTATCCAGCAGGCAGGGAATGGATGCTTT  1043

seq1  TAATTGTCTGCTGGTGTCAGTAGGTCCACACCAGAATTC  1085
      |||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTCTGCTGGTGTCAGTAGGTCCACACCAGAATTC  1082

seq1: chr7_61477989_61479117
seq2: B6Ng01-015K06.g_69_1180

seq1  GAATTCTACAGTGTGTCTACATTACATAAATGTGAAACTCGAAGTGCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAGTGTGTCTACATTACATAAATGTGAAACTCGAAGTGCCAG  50

seq1  AAAAATAAGTAACAATGTTAGCTACAAAGGAAAAGTTAAAATACTGGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAGTAACAATGTTAGCTACAAAGGAAAAGTTAAAATACTGGCTC  100

seq1  GATATTAAAACAATTCAAATATTTACTTCTCTTTCTATTCCTTTTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAAAACAATTCAAATATTTACTTCTCTTTCTATTCCTTTTTAAAA  150

seq1  CAGTTTTTTTTTAAACCAAGAAATGATTTTCAAGTTATTAGGAAGAACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTTTTTTAAACCAAGAAATGATTTTCAAGTTATTAGGAAGAACTA  200

seq1  GATCTGTGAAAATATTACAGCATAATATAAATTTAGAAAGACTTATAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGTGAAAATATTACAGCATAATATAAATTTAGAAAGACTTATAGGA  250

seq1  ATCTATGTGAAAATGAAAACAATGTATAGATATAAATAGTGATAATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGTGAAAATGAAAACAATGTATAGATATAAATAGTGATAATATTT  300

seq1  TCAGTACTGTAAAGGTCTCCCCACTCCTCTCTATAGAGCATTGGCTCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACTGTAAAGGTCTCCCCACTCCTCTCTATAGAGCATTGGCTCTCC  350

seq1  TGGTGCTGGGACACATGTGTGAGGAATCCGAATGACCGCATGGATCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTGGGACACATGTGTGAGGAATCCGAATGACCGCATGGATCAGAA  400

seq1  TTCCTGCCCTCTACAGAAACAGCTAAAGCTCTTAACTGCTGAGACATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCCCTCTACAGAAACAGCTAAAGCTCTTAACTGCTGAGACATCTT  450

seq1  TCCAACCCTCAACTCTTTATCATATATTCTATATAGAATTAATAATTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCCTCAACTCTTTATCATATATTCTATATAGAATTAATAATTAGA  500

seq1  TAACTGTAGCTTTTAAAAAGTGTTCTACCAGTACTCTGTGCCTCGGTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTAGCTTTTAAAAAGTGTTCTACCAGTACTCTGTGCCTCGGTATA  550

seq1  TTACTTAGACTCAACTAAGTTTCAAATAATTTTTGGCAGCATTATTACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTAGACTCAACTAAGTTTCAAATAATTTTTGGCAGCATTATTACAA  600

seq1  AGAATTTCTAGTGAAAACTATCAGGTTATCTTTTCAATGACTTGAAGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCTAGTGAAAACTATCAGGTTATCTTTTCAATGACTTGAAGATG  650

seq1  AAACTTTAATTAAATATATTATGATTTTTTTTCTACTTAAGAAGATGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTAATTAAATATATTATGATTTTTTTTCTACTTAAGAAGATGTGA  700

seq1  AATGAAAACTCCAAATTTATCCCTGAACATGGTTATATTAAACATTTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAACTCCAAATTTATCCCTGAACATGGTTATATTAAACATTTGCA  750

seq1  GAGGATAAGAATCATTTACAGACATGCTAGAGAACATTAATTTAACTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATAAGAATCATTTACAGACATGCTAGAGAACATTAATTTAACTTCA  800

seq1  CCCAGAGAAAGGAATAATCTACTTACTACCTTCAGAGCAGTATATTTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGAAAGGAATAATCTACTTACTACCTTCAGAGCAGTATATTTTCT  850

seq1  ATACTTCCCTTGGCAGCCAGCTGCCAGGACCAATAAACTCTATGAGTATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCCCTTGGCAGCCAGCTGCCAGGACCAATAAACTCTATGAGTATG  900

seq1  CATGAGCTGAAGGAGAGGCAGAAACTCCAGTACTGTGGAGTCTGAACTTG  950
      |||||||||||||||||||||||||||||||||||||||||||||   ||
seq2  CATGAGCTGAAGGAGAGGCAGAAACTCCAGTACTGTGGAGTCTGA--CTG  948

seq1  TGCTGTCTCCTGCTCAAAGTCTAAGTTCTCACATTGTTGTAGCCATTGAG  1000
      ||||||||||||||| ||||||||| |||||||||||||||| |||||||
seq2  TGCTGTCTCCTGCTC-AAGTCTAAG-TCTCACATTGTTGTAG-CATTGAG  995

seq1  AAAATGCCTTCAGTATCCCAAATGCATCTTGTGAACATGGGATGCTATAC  1050
        |||| ||||||||||||||||||||||   ||||||||||||||||||
seq2  --AATG-CTTCAGTATCCCAAATGCATCTGTGGAACATGGGATGCTATAC  1042

seq1  TT-GTG-TCTAAAGCTAGGAGTTGTGAACAGATTCACAGACCCAGGCCAT  1098
      || ||| |||||||||||||| |||||   ||||| |||||||| |||||
seq2  TTGGTGTTCTAAAGCTAGGAG-TGTGA--CGATTC-CAGACCCA-GCCAT  1087

seq1  ATTAAACTAGGTGATTTTTTTTTGCATTGAA  1129
      ||  | ||| ||||   ||||||||||||||
seq2  AT--ACCTA-GTGA---TTTTTTGCATTGAA  1112