BAC Information

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BAC

Clone NameB6Ng01-015P11
Chromosome7 (Build37)
Map Location 150,438,922 - 150,625,562
singlet/doubletdoublet
Overlap geneKcnq1
Upstream geneLOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264, EG624121, Th, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5
Downstream geneCdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498, Shank2, Cttn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015P11.bB6Ng01-015P11.g
ACCDH850080DH850081
length1,024777
definitionDH850080|Mus musculus domesticus DNA, BAC clone: B6Ng01-015P11, 5' end.DH850081|Mus musculus domesticus DNA, BAC clone: B6Ng01-015P11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,624,535 - 150,625,562)(150,438,922 - 150,439,698)
sequence
gaattctacactaacaggaaacaactttcatttttttgccttgaaaactt
ccatgatgtctcttggctgtgcattttctatgagctatctcctacccacc
tggtgttacggttggcaggagcttttagggttaacactgagggtcagcag
agtccttggggacaggatactcctccaggcaggagccaagggaggtaggt
atgacaaagaatgaggtccctgaccacaggccaggatgttcaaaggatag
cagggaggaggtgcaggaggagaggagtctaatggctaggtgtgtggagg
caggatgggatttagccagcccaggctgcaggaaggagggactgggggac
aggagcttcagcctggccccaggccaggagagaaggccttgcaagacaaa
ctgaattctgggtgcaattggaccagacctcccatatcaactgacttcag
actgggccagtgcaataattaggatccactttttcttgaacagatgacag
aaacatgcccactaaaggattaatgtcatgtcctgagaaagggagtggag
ctgtctgacccatggaagatcagggttgtatggtgttctgaggctggttt
gacatcgtgctagcaaatggtcatacaccacaagggcacttggcagtcac
tttcacttacccacctatccatccacccatctatttacccatctattcat
ccatctatccatccatccattcactcattttacccatttattttttcact
caatactaatctattcttttatgcattcgtccatatattcatctaccatc
tacctaaacatcaacccactcatccatctggcttcccattatccacccac
ctactcaggcaccaatccatctctgtaccacctatcgatccataagtgca
ttctgtcaggcaacttagcccagtcctgctgtcgttcacttggtaaggct
acagaggtgaagctgactaccattctcttctacccacatagtgttgccca
acagcctggaaaatagttggggcg
gaattcctaaatcttacacactggggagtaggaaatgaggacccctttaa
ggaagattcggtgaactatttccagaagccaggcctggttgcagagttcg
caaaaacaacaggtgtccactcaagcaaggtattttcctaagcggaactg
ggtaccagctgtgaatatacatttacactgcactctcgccttgttcctgg
cagctgttgtgggaatagcttttacactttctgtccttgtctcttacttc
tcccctctgagtgaagacacaggtggtgttgggtctggtctggctcaggg
tctgtgaacagggcatgggcagctggcacaggctgtggggctgcagctca
gcaatgtcacgcaggacctggctgcagctgtccagatgccctagggaggg
ttttttttccttcatggtgcaggatccacagggctttggcaaatccacca
agacggggaaattgattgaggggggacagggaaagggcctctgctagggg
aggacataggcagcttgtttattccatcggagtgagctggctcaggggac
ttgcctgtgccaggcaccggaggtgacatgggagaggaagaaagcaaggt
tcctgtgctgagggccaggcacacataagccccatagcaattgaaggggc
aatctctagagccttggggagcttacataggaaggtggtttaggttacat
ctgggagatcaggcaggattataatcagttaggaggaggaggagggcagg
ggtgagcagctgggtgaagttactgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_150624535_150625562
seq2: B6Ng01-015P11.b_44_1067 (reverse)

seq1  CGCCCAAACTATTTTCCAGGCTGGTTGGGCAAACACTATGTGGGTAGAAG  50
      ||||| |||||||||||||||| ||||||| |||||||||||||||||||
seq2  CGCCCCAACTATTTTCCAGGCT-GTTGGGC-AACACTATGTGGGTAGAAG  48

seq1  AGATGGGGTGTCAGCCTCACCTCCTGTAGCCTTACCAAGGTGAACGACAG  100
      |||  ||  |||||| |||||| ||||||||||||||| |||||||||||
seq2  AGAATGGTAGTCAGCTTCACCT-CTGTAGCCTTACCAA-GTGAACGACAG  96

seq1  CAGGACTGGGCTAAGTTGCCTGAACAGAATGCACTTATGGATCGATAGGT  150
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAGGACTGGGCTAAGTTGCCTG-ACAGAATGCACTTATGGATCGATAGGT  145

seq1  GGGTACAGAGATGGA-TGGTGCCTGAGTAGGTGGGTGGATAATGGGAAGC  199
       |||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  -GGTACAGAGATGGATTGGTGCCTGAGTAGGTGGGTGGATAATGGGAAGC  194

seq1  CAGATGGATGAGTGGGTTGATGTTTAGGTAGATGGTAGATGAATATATGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGATGAGTGGGTTGATGTTTAGGTAGATGGTAGATGAATATATGG  244

seq1  ACGAATGCATAAAAGAATAGATTAGTATTGAGTGAAAAAATAAATGGGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATGCATAAAAGAATAGATTAGTATTGAGTGAAAAAATAAATGGGTA  294

seq1  AAATGAGTGAATGGATGGATGGATAGATGGATGAATAGATGGGTAAATAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGTGAATGGATGGATGGATAGATGGATGAATAGATGGGTAAATAG  344

seq1  ATGGGTGGATGGAT-GGTGGGTAAGTGAAAGTGACTGCCAAGTGCCCTTG  398
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATGGGTGGATGGATAGGTGGGTAAGTGAAAGTGACTGCCAAGTGCCCTTG  394

seq1  TGGTGTATGACCATTTGCTAGCACGATGTCAAACCAGCCTCAGAACACCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTATGACCATTTGCTAGCACGATGTCAAACCAGCCTCAGAACACCA  444

seq1  TACAACCCTGATCTTCCATGGGTCAGACAGCTCCACTCCCTTTCTCAGGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCCTGATCTTCCATGGGTCAGACAGCTCCACTCCCTTTCTCAGGA  494

seq1  CATGACATTAATCCTTTAGTGGGCATGTTTCTGTCATCTGTTCAAGAAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACATTAATCCTTTAGTGGGCATGTTTCTGTCATCTGTTCAAGAAAA  544

seq1  AGTGGATCCTAATTATTGCACTGGCCCAGTCTGAAGTCAGTTGATATGGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGATCCTAATTATTGCACTGGCCCAGTCTGAAGTCAGTTGATATGGG  594

seq1  AGGTCTGGTCCAATTGCACCCAGAATTCAGTTTGTCTTGCAAGGCCTTCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGGTCCAATTGCACCCAGAATTCAGTTTGTCTTGCAAGGCCTTCT  644

seq1  CTCCTGGCCTGGGGCCAGGCTGAAGCTCCTGTCCCCCAGTCCCTCCTTCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGCCTGGGGCCAGGCTGAAGCTCCTGTCCCCCAGTCCCTCCTTCC  694

seq1  TGCAGCCTGGGCTGGCTAAATCCCATCCTGCCTCCACACACCTAGCCATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCTGGGCTGGCTAAATCCCATCCTGCCTCCACACACCTAGCCATT  744

seq1  AGACTCCTCTCCTCCTGCACCTCCTCCCTGCTATCCTTTGAACATCCTGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCCTCTCCTCCTGCACCTCCTCCCTGCTATCCTTTGAACATCCTGG  794

seq1  CCTGTGGTCAGGGACCTCATTCTTTGTCATACCTACCTCCCTTGGCTCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGTCAGGGACCTCATTCTTTGTCATACCTACCTCCCTTGGCTCCT  844

seq1  GCCTGGAGGAGTATCCTGTCCCCAAGGACTCTGCTGACCCTCAGTGTTAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGAGGAGTATCCTGTCCCCAAGGACTCTGCTGACCCTCAGTGTTAA  894

seq1  CCCTAAAAGCTCCTGCCAACCGTAACACCAGGTGGGTAGGAGATAGCTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAAAGCTCCTGCCAACCGTAACACCAGGTGGGTAGGAGATAGCTCA  944

seq1  TAGAAAATGCACAGCCAAGAGACATCATGGAAGTTTTCAAGGCAAAAAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAATGCACAGCCAAGAGACATCATGGAAGTTTTCAAGGCAAAAAAA  994

seq1  TGAAAGTTGTTTCCTGTTAGTGTAGAATTC  1028
      ||||||||||||||||||||||||||||||
seq2  TGAAAGTTGTTTCCTGTTAGTGTAGAATTC  1024

seq1: chr7_150438922_150439698
seq2: B6Ng01-015P11.g_70_846

seq1  GAATTCCTAAATCTTACACACTGGGGAGTAGGAAATGAGGACCCCTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAATCTTACACACTGGGGAGTAGGAAATGAGGACCCCTTTAA  50

seq1  GGAAGATTCGGTGAACTATTTCCAGAAGCCAGGCCTGGTTGCAGAGTTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATTCGGTGAACTATTTCCAGAAGCCAGGCCTGGTTGCAGAGTTCG  100

seq1  CAAAAACAACAGGTGTCCACTCAAGCAAGGTATTTTCCTAAGCGGAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAACAGGTGTCCACTCAAGCAAGGTATTTTCCTAAGCGGAACTG  150

seq1  GGTACCAGCTGTGAATATACATTTACACTGCACTCTCGCCTTGTTCCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCAGCTGTGAATATACATTTACACTGCACTCTCGCCTTGTTCCTGG  200

seq1  CAGCTGTTGTGGGAATAGCTTTTACACTTTCTGTCCTTGTCTCTTACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTTGTGGGAATAGCTTTTACACTTTCTGTCCTTGTCTCTTACTTC  250

seq1  TCCCCTCTGAGTGAAGACACAGGTGGTGTTGGGTCTGGTCTGGCTCAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCTGAGTGAAGACACAGGTGGTGTTGGGTCTGGTCTGGCTCAGGG  300

seq1  TCTGTGAACAGGGCATGGGCAGCTGGCACAGGCTGTGGGGCTGCAGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAACAGGGCATGGGCAGCTGGCACAGGCTGTGGGGCTGCAGCTCA  350

seq1  GCAATGTCACGCAGGACCTGGCTGCAGCTGTCCAGATGCCCTAGGGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTCACGCAGGACCTGGCTGCAGCTGTCCAGATGCCCTAGGGAGGG  400

seq1  TTTTTTTTCCTTCATGGTGCAGGATCCACAGGGCTTTGGCAAATCCACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCCTTCATGGTGCAGGATCCACAGGGCTTTGGCAAATCCACCA  450

seq1  AGACGGGGAAATTGATTGAGGGGGGACAGGGAAAGGGCCTCTGCTAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGGGGAAATTGATTGAGGGGGGACAGGGAAAGGGCCTCTGCTAGGGG  500

seq1  AGGACATAGGCAGCTTGTTTATTCCATCGGAGTGAGCTGGCTCAGGGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATAGGCAGCTTGTTTATTCCATCGGAGTGAGCTGGCTCAGGGGAC  550

seq1  TTGCCTGTGCCAGGCACCGGAGGTGACATGGGAGAGGAAGAAAGCAAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGTGCCAGGCACCGGAGGTGACATGGGAGAGGAAGAAAGCAAGGT  600

seq1  TCCTGTGCTGAGGGCCAGGCACACATAAGCCCCATAGCAATTGAAGGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGCTGAGGGCCAGGCACACATAAGCCCCATAGCAATTGAAGGGGC  650

seq1  AATCTCTAGAGCCTTGGGGAGCTTACATAGGAAGGTGGTTTAGGTTACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTAGAGCCTTGGGGAGCTTACATAGGAAGGTGGTTTAGGTTACAT  700

seq1  CTGGGAGATCAGGCAGGATTATAATCAGTTAGGAGGAGGAGGAGGGCAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGATCAGGCAGGATTATAATCAGTTAGGAGGAGGAGGAGGGCAGG  750

seq1  GGTGAGCAGCTGGGTGAAGTTACTGAC  777
      |||||||||||||||||||||||||||
seq2  GGTGAGCAGCTGGGTGAAGTTACTGAC  777