BAC Information

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BAC

Clone NameB6Ng01-016F02
Chromosome7 (Build37)
Map Location 18,360,729 - 18,361,344
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc1a5, Fkrp, Strn4, Prkd2, Dact3, Gng8, Ptgir, Calm3, EG434128, 0710005I19Rik, LOC100042835, LOC434130, Ppp5c, Hif3a, Psg16, LOC100042844, LOC640145, Ceacam3, Psg29, LOC414361, LOC671132, LOC100042868, Psg-ps1, LOC666767, Psg30
Downstream genePpia-ps7_184.1, Ceacam14, EG381852, Ceacam11, Ceacam13, LOC384560, Ceacam12, Igfl3, LOC671190, Mill1, Psg18, LOC546936, Psg28, LOC666831, EG574429, EG232930, Psg25, EG545925, Psg23, Psg21, EG434540, BC050099, LOC666863
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016F02.b
ACCDH850315
length616
definitionDH850315|Mus musculus domesticus DNA, BAC clone: B6Ng01-016F02, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttactgtgtattgaactcttttctcatgtttctgaattcattg
caccgaactgtaatttgtgtctctgctcaaactcaatagcacttgtgggg
tacagaggatgatttccctcacctcttcctctagagtcatcttttcattt
ctttatcatttttatgagatttatattattgtgtgtgtgtgtgcatgtat
acgtgcatgtgtgcgcatgcacaccccgtgcacacacttcagaaatatgt
gagttaaaggatcctctgaggacagtggcctgtatggattccctctggag
ttggagatagttaaaattataatttctcctaagatgaatactgggaactg
aactcaagtcctctgagagaacttgcacactgagccacctctccagcact
tctttctcatttttcagctctatgacctttgtggtttcagtcatacccta
accttaccttctaggagccagtctgatttatagtccattgcaactatatc
tttgtgaatacaggaatttgcctgcatttgagggaagatatactacctgg
aaatttgtcagatatatgtgaatgaatgaataaataagtgaatgaaggat
ggaagggaggaaggaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_18360729_18361344
seq2: B6Ng01-016F02.b_39_654 (reverse)

seq1  TTCCTTCCTCCCTTCCATCCTTCATTCACTTATTTATTCATTCATTCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTCCCTTCCATCCTTCATTCACTTATTTATTCATTCATTCACA  50

seq1  TATATCTGACAAATTTCCAGGTAGTATATCTTCCCTCAAATGCAGGCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTGACAAATTTCCAGGTAGTATATCTTCCCTCAAATGCAGGCAAA  100

seq1  TTCCTGTATTCACAAAGATATAGTTGCAATGGACTATAAATCAGACTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTATTCACAAAGATATAGTTGCAATGGACTATAAATCAGACTGGC  150

seq1  TCCTAGAAGGTAAGGTTAGGGTATGACTGAAACCACAAAGGTCATAGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGAAGGTAAGGTTAGGGTATGACTGAAACCACAAAGGTCATAGAGC  200

seq1  TGAAAAATGAGAAAGAAGTGCTGGAGAGGTGGCTCAGTGTGCAAGTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATGAGAAAGAAGTGCTGGAGAGGTGGCTCAGTGTGCAAGTTCTC  250

seq1  TCAGAGGACTTGAGTTCAGTTCCCAGTATTCATCTTAGGAGAAATTATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGACTTGAGTTCAGTTCCCAGTATTCATCTTAGGAGAAATTATAA  300

seq1  TTTTAACTATCTCCAACTCCAGAGGGAATCCATACAGGCCACTGTCCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACTATCTCCAACTCCAGAGGGAATCCATACAGGCCACTGTCCTCA  350

seq1  GAGGATCCTTTAACTCACATATTTCTGAAGTGTGTGCACGGGGTGTGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATCCTTTAACTCACATATTTCTGAAGTGTGTGCACGGGGTGTGCAT  400

seq1  GCGCACACATGCACGTATACATGCACACACACACACAATAATATAAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCACACATGCACGTATACATGCACACACACACACAATAATATAAATCT  450

seq1  CATAAAAATGATAAAGAAATGAAAAGATGACTCTAGAGGAAGAGGTGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAATGATAAAGAAATGAAAAGATGACTCTAGAGGAAGAGGTGAGG  500

seq1  GAAATCATCCTCTGTACCCCACAAGTGCTATTGAGTTTGAGCAGAGACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAAATCATCCTCTGTACCCCACAAGTGCTATTGAGTTTGAGCAGAGACAC  550

seq1  AAATTACAGTTAGGTGTAATGAATTCAGAAACATGAGAAAAGAGTTCAAT  600
      ||||||||||| |||| |||||||||||||||||||||||||||||||||
seq2  AAATTACAGTTCGGTGCAATGAATTCAGAAACATGAGAAAAGAGTTCAAT  600

seq1  ACATAGTAAAGAATTC  616
      ||| ||||||||||||
seq2  ACACAGTAAAGAATTC  616