BAC Information

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BAC

Clone NameB6Ng01-016K21
Chromosome7 (Build37)
Map Location 137,101,968 - 137,247,457
singlet/doubletdoublet
Overlap geneLOC100043150
Upstream geneLOC210714, LOC100043144, Ppapdc1a, Brwd2
Downstream geneFgfr2, LOC546005, Ate1, LOC100043163, Nsmce4a, Tacc2, LOC619876, Btbd16, EG434249, Plekha1, Htra1, Dmbt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016K21.bB6Ng01-016K21.g
ACCDH850578DH850579
length1,180970
definitionDH850578|Mus musculus domesticus DNA, BAC clone: B6Ng01-016K21, 5' end.DH850579|Mus musculus domesticus DNA, BAC clone: B6Ng01-016K21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,101,968 - 137,103,140)(137,246,484 - 137,247,457)
sequence
gaattcatttctattcagaggggctttaatgttctcgtggagtccattgg
gtgccgaccacgaattcagagtctacacagagagcttatggtgactcatt
aaccagactctaactgaatagagcactgactgaccacagtgctgactctc
agagaattaaggacaaagagaatacactgagataaatcactcagggatta
caatacagagtattcaaactgttctcatcagggctggcaccatggctcag
gagatcaaggctcttgaaaatctgatctctggggccatcatagtagaaag
agaaaatcaacttccctaaattccctcacacacacacacacacacacacg
gacagggacacggaatcaggcacgtgcacagtcacacattcatgtacact
cacaataaatatagtctaaagttagttaattagttaattgttgacattta
agagaacataataaataaataaaacatgctaaaataccaataaggagaac
taatccaagagcctacctcaggagatctgggatttggttactattatatt
cccttactggccatcttggagcatttgaacttctaatgcacaaactgtat
cttcttcaaaaaatatctgtagaaattccaggttgcttgtgaaagtccca
gaaatatgtgactccctgaaccagtgactgcaaagatgataagataatca
taccaattaatactcacttctaaaataaatgactgctttctgccataaaa
cttgccttccaaagtactctaaacccatatagtcactcttttttttattt
tattttactcttcaatgacattcaatgatgaggcatatttaggggttcat
cctgaacttctgatgcatgcatatcatatcatatcagaaccaaactggtg
tatctagcatatccatcaacccagaaattaatcttttttttttttgtagt
gagaaacaggtatttaaatcctgctgtgaatgggtttaaaatatatctaa
tacaacgctgctaggtgctgttactggggaagccacagagcatcaaatgg
gactactttatttgtacctaagtctatggttcttgaacaaaatactccca
cacgctattcctctgccttcctcggcttctgttccatcagctatcaatgt
tccagtatgactgaagtcatttatggcctg
gaattcattgccaaaggcaggtaaagctatgtgtagatctagccgcagtc
tctgactttgacttatctcctctagctcccgggcatctgaaagagttttc
acaggtgcctttccctctggctcactgtgattttacttttaagggcaaag
acaaagcctacacatgcaagttctgtaaaactggggttcacctgcctagt
atttttttttctttttctctgtcctggttaaaaaaaccaaaatgataagt
atatggacccattttgatagacacctccccaccgacaaccactctgctgg
atacaaatctcaactttagccaatctaagccagttatagatacccacctc
ccctgtgtgtctgggaggtgatttatgagggagcctattacaaagcctgt
aacaatgtagaatgggggacacctttgggctggcttttcctttctgacaa
tgagtagagcatacgatgaagaaaatgccctctgcctacgctgctttcct
ttctgtttggatgggacattgccatgccgacttggtagctggtgctgtag
cagtcagtcttctgtgaccacgaggggagattgatggcttgatagatgga
tagaaggactgcagtctggggtggcgacttggaagtgcagagttagtgaa
tcaaacctggatggctgaccgatagctcaactgggggggctaatgattta
ccctgcttttcggtcagatactccgatgcttatggctcaatatattccta
agtaaataatcattaatttgtgaaaaacaaatcaagggaagagtgactaa
ttctctcactaataagtgctgtgttaattaactgcaacaagtatcgttta
tagcattgaaggattcttatctttattaggagcagtttggtgcaagtgac
tgaaaggaaacccaggaaatggtagtggttgtgatcgttgggaaataatt
ttcagttatacctgaatcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_137101968_137103140
seq2: B6Ng01-016K21.b_33_1212

seq1  GAATTCATTTCTATTCAGAGGGGCTTTAATGTTCTCGTGGAGTCCATTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCTATTCAGAGGGGCTTTAATGTTCTCGTGGAGTCCATTGG  50

seq1  GTGCCGACCACGAATTCAGAGTCTACACAGAGAGCTTATGGTGACTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCGACCACGAATTCAGAGTCTACACAGAGAGCTTATGGTGACTCATT  100

seq1  AACCAGACTCTAACTGAATAGAGCACTGACTGACCACAGTGCTGACTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGACTCTAACTGAATAGAGCACTGACTGACCACAGTGCTGACTCTC  150

seq1  AGAGAATTAAGGACAAAGAGAATACACTGAGATAAATCACTCAGGGATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATTAAGGACAAAGAGAATACACTGAGATAAATCACTCAGGGATTA  200

seq1  CAATACAGAGTATTCAAACTGTTCTCATCAGGGCTGGCACCATGGCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACAGAGTATTCAAACTGTTCTCATCAGGGCTGGCACCATGGCTCAG  250

seq1  GAGATCAAGGCTCTTGAAAATCTGATCTCTGGGGCCATCATAGTAGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCAAGGCTCTTGAAAATCTGATCTCTGGGGCCATCATAGTAGAAAG  300

seq1  AGAAAATCAACTTCCCTAAATTCCCTCACACACACACACACACACACACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATCAACTTCCCTAAATTCCCTCACACACACACACACACACACACG  350

seq1  GACAGGGACACGGAATCAGGCACGTGCACAGTCACACATTCATGTACACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGACACGGAATCAGGCACGTGCACAGTCACACATTCATGTACACT  400

seq1  CACAATAAATATAGTCTAAAGTTAGTTAATTAGTTAATTGTTGACATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATAAATATAGTCTAAAGTTAGTTAATTAGTTAATTGTTGACATTTA  450

seq1  AGAGAACATAATAAATAAATAAAACATGCTAAAATACCAATAAGGAGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACATAATAAATAAATAAAACATGCTAAAATACCAATAAGGAGAAC  500

seq1  TAATCCAAGAGCCTACCTCAGGAGATCTGGGATTTGGTTACTATTATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCAAGAGCCTACCTCAGGAGATCTGGGATTTGGTTACTATTATATT  550

seq1  CCCTTACTGGCCATCTTGGAGCATTTGAACTTCTAATGCACAAACTGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTACTGGCCATCTTGGAGCATTTGAACTTCTAATGCACAAACTGTAT  600

seq1  CTTCTTCAAAAAATATCTGTAGAAATTCCAGGTTGCTTGTGAAAGTCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCAAAAAATATCTGTAGAAATTCCAGGTTGCTTGTGAAAGTCCCA  650

seq1  GAAATATGTGACTCCCTGAACCAGTGACTGCAAAGATGATAAGATAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATGTGACTCCCTGAACCAGTGACTGCAAAGATGATAAGATAATCA  700

seq1  TACCAATTAATACTCACTTCTAAAATAAATGACTGCTTTCTGCCATAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAATTAATACTCACTTCTAAAATAAATGACTGCTTTCTGCCATAAAA  750

seq1  CTTGCCTTCCAAAGTACTCTAAACCCATATAGTCACTCTTTTTTTTATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTTCCAAAGTACTCTAAACCCATATAGTCACTCTTTTTTTTATTT  800

seq1  TATTTTACTCTTCAATGACATTCAATGATGAGGCATATTTAGGGGTTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTACTCTTCAATGACATTCAATGATGAGGCATATTTAGGGGTTCAT  850

seq1  CCTGAACTTCTGATGCATGCATATCATATCATATCAGAACCAAACTGGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACTTCTGATGCATGCATATCATATCATATCAGAACCAAACTGGTG  900

seq1  TATCTAGCATATCCATCAACCCAGAAATTAATCTTTTTTTTTTTTGTAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAGCATATCCATCAACCCAGAAATTAATCTTTTTTTTTTTTGTAGT  950

seq1  GAG-AACAGGTATTTAAATCCTGCTGTGAAT-GGTTTAAAATATATCTAA  998
      ||| ||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAGAAACAGGTATTTAAATCCTGCTGTGAATGGGTTTAAAATATATCTAA  1000

seq1  TACAACGCTGCTAGGTGCTGTTACT-GTGAAG-CACAGAGCATCAAAT-G  1045
      ||||||||||||||||||||||||| | |||| ||||||||||||||| |
seq2  TACAACGCTGCTAGGTGCTGTTACTGGGGAAGCCACAGAGCATCAAATGG  1050

seq1  GACTACCTTTATTGTACCTAAGTCTAT-GTTCTTG-ACCAAATACT-CCA  1092
      |||||| ||  |||||||||||||||| ||||||| || ||||||| |||
seq2  GACTACTTTATTTGTACCTAAGTCTATGGTTCTTGAACAAAATACTCCCA  1100

seq1  CACGCTA-TCCTCTGCCTTCCTC-GCTTCTGTCCCCATCAGCCTTATC-A  1139
      ||||||| ||||||||||||||| ||||||||  ||||||||  |||| |
seq2  CACGCTATTCCTCTGCCTTCCTCGGCTTCTGT-TCCATCAGC--TATCAA  1147

seq1  TGTTTCATGTATGACTGAAGTCATTCTAT-GCCTG  1173
      |||| || ||||||||||||||||| ||| |||||
seq2  TGTTCCA-GTATGACTGAAGTCATT-TATGGCCTG  1180

seq1: chr7_137246484_137247457
seq2: B6Ng01-016K21.g_69_1038 (reverse)

seq1  TGGATTCAGTTATAACTGAAATTTTAATTTCCCACCGATCAC-ACCACTA  49
      ||||||||| ||||||||||| ||  |||||||| ||||||| |||||||
seq2  TGGATTCAGGTATAACTGAAAATT--ATTTCCCAACGATCACAACCACTA  48

seq1  CCATTTCCTGGGTTTCCTTTTCAGTCACTTGCAACCAAACTGCTCCTTAT  99
      ||||||||||||||||| |||||||||||||| |||||||||||||| ||
seq2  CCATTTCCTGGGTTTCC-TTTCAGTCACTTGC-ACCAAACTGCTCCTAAT  96

seq1  TAAGATAAGAAATCCTTTCAGTGCTATAAACGATACTTTGTTGCAGTT-A  148
       |||||||| ||||| |||| ||||||||||||||| ||||||||||| |
seq2  AAAGATAAG-AATCC-TTCAATGCTATAAACGATAC-TTGTTGCAGTTAA  143

seq1  TTAACACAGCACTTATTAGTGAGAGAATTAGTCACTCTTCCCTTGATTTG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACAGCACTTATTAGTGAGAGAATTAGTCACTCTTCCCTTGATTTG  193

seq1  TTTTTCACAAATTAATGATTATTTACTTAGGAATATATTGAGCCATAAGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCACAAATTAATGATTATTTACTTAGGAATATATTGAGCCATAAGC  243

seq1  ATCGGAGTATCTGACCG-AAAGCAGGGTAAATCATTAGCCCCCCCAGTTG  297
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATCGGAGTATCTGACCGAAAAGCAGGGTAAATCATTAGCCCCCCCAGTTG  293

seq1  AGCTATCGGTCAGCCATCCAGGTTTGATTCACTAACTCTGCACTTCCAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATCGGTCAGCCATCCAGGTTTGATTCACTAACTCTGCACTTCCAAG  343

seq1  TCGCCACCCCAGACTGCAGTCCTTCTATCCATCTATCAAGCCATCAATCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCACCCCAGACTGCAGTCCTTCTATCCATCTATCAAGCCATCAATCT  393

seq1  CCCCTCGTGGTCACAGAAGACTGACTGCTACAGCACCAGCTACCAAGTCG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCGTGGTCACAGAAGACTGACTGCTACAGCACCAGCTACCAAGTCG  443

seq1  GCATGGCAATGTCCCATCCAAACAGAAAGGAAAGCAGCGTAGGCAGAGGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGCAATGTCCCATCCAAACAGAAAGGAAAGCAGCGTAGGCAGAGGG  493

seq1  CATTTTCTTCATCGTATGCTCTACTCATTGTCAGAAAGGAAAAGCCAGCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTTCATCGTATGCTCTACTCATTGTCAGAAAGGAAAAGCCAGCC  543

seq1  CAAAGGTGTCCCCCATTCTACATTGTTACAGGCTTTGTAATAGGCTCCCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTGTCCCCCATTCTACATTGTTACAGGCTTTGTAATAGGCTCCCT  593

seq1  CATAAATCACCTCCCAGACACACAGGGGAGGTGGGTATCTATAACTGGCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATCACCTCCCAGACACACAGGGGAGGTGGGTATCTATAACTGGCT  643

seq1  TAGATTGGCTAAAGTTGAGATTTGTATCCAGCAGAGTGGTTGTCGGTGGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTGGCTAAAGTTGAGATTTGTATCCAGCAGAGTGGTTGTCGGTGGG  693

seq1  GAGGTGTCTATCAAAATGGGTCCATATACTTATCATTTTGGTTTTTTTAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGTCTATCAAAATGGGTCCATATACTTATCATTTTGGTTTTTTTAA  743

seq1  CCAGGACAGAGAAAAAGAAAAAAAAATACTAGGCAGGTGAACCCCAGTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACAGAGAAAAAGAAAAAAAAATACTAGGCAGGTGAACCCCAGTTT  793

seq1  TACAGAACTTGCATGTGTAGGCTTTGTCTTTGCCCTTAAAAGTAAAATCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAACTTGCATGTGTAGGCTTTGTCTTTGCCCTTAAAAGTAAAATCA  843

seq1  CAGTGAGCCAGAGGGAAAGGCACCTGTGAAAACTCTTTCAGATGCCCGGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGCCAGAGGGAAAGGCACCTGTGAAAACTCTTTCAGATGCCCGGG  893

seq1  AGCTAGAGGAGATAAGTCAAAGTCAGAGACTGCGGCTAGATCTACACATA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAGGAGATAAGTCAAAGTCAGAGACTGCGGCTAGATCTACACATA  943

seq1  GCTTTACCTGCCTTTGGCAATGAATTC  974
      |||||||||||||||||||||||||||
seq2  GCTTTACCTGCCTTTGGCAATGAATTC  970