BAC Information

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BAC

Clone NameB6Ng01-017M14
Chromosome10 (Build37)7 (Build37)
Map Location 104,432,871 - 104,433,40452,739,350 - 52,739,495
singlet/doubletsingletsinglet
Overlap geneLOC100042383
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneTmtc2, EG627573, BC067068, Ccdc59
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017M14.bB6Ng01-017M14.g
ACCDH851369DH851370
length963174
definitionDH851369|Mus musculus domesticus DNA, BAC clone: B6Ng01-017M14, 5' end.DH851370|Mus musculus domesticus DNA, BAC clone: B6Ng01-017M14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,432,871 - 104,433,404)(52,739,350 - 52,739,495)
sequence
gaattcactggtcttaccacattccccatcatcctgaagcagctgggctg
atagaaagatggaatggccttttgaagacgcagttacagcgccaattagg
tggtaacagcttggaaggctggggcagagttcttcagaaggcagtatatg
ctttgaatcagcgctcgatatatggtacagtttcacccatagccaggatt
catgggtccaggaatcaaggggtggaaaacggaatagttccacttactat
cactcctagtgaccctctaggaaaatttttgcttcctgtccccataactc
taggttctgctggcttagaagttttggctccagagaggggagtgctccta
ccaggagctacaacaaacatttcattgaactggaagctcagacttccccc
tggtcattttgggcttctaatgcccttaaaccaacaggctaaaaaaggaa
taacagtgttaggaggggtgatagatccagattaccatggggaaattgga
ttacctcttcacaatggtggtaagcaagattatgtctggagtgcaggaga
tcccttagggcgtctcttagtactaccatgtcctgtgattaaagtcaatg
ggaaactacaacagcctaatccaagcaggatgacaaaggacgcagaccca
tcaggaatgaaggtatgggtcaatcctccaggaaaagagccaagacctgc
tgaggtgctggctgaaggtgaaggaaatacagaatgggtagtagaggaag
gtagttataaataccaatttaaggccacgtaaccagttgcagaaacgagg
attataaagtaatatgaattgcccatttgtaatttaactaatgcgtttgc
gattgtacgagggatagtattatcatggtttaggcgttatttacaacctt
gtaattgtttcatggtgaacatgagatattatttgtggtcaagttgacaa
ggggtgggattgt
ctagagatcctctttcctcttcctccagagttccggccctcatactgctt
tttttgtttgtttgttttgttttgagacagggtttctctgtagtcttgac
tgtcctggaactcactttgtagaccaggctggcctctgactcaaaaatct
gcctgtctctgcctcccaagtgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104432871_104433404
seq2: B6Ng01-017M14.b_470_1012 (reverse)

seq1  ACAAT-CCACCCCTTGTCAACTTGA-CACAAATAATATCTCATGTTCA-C  47
      ||||| ||||||||||||||||||| |||||||||||||||||||||| |
seq2  ACAATCCCACCCCTTGTCAACTTGACCACAAATAATATCTCATGTTCACC  50

seq1  ATGAAACAATAACAAGGTTGTAAAT-ACGCCTAA--CATGATATAACTAT  94
      |||||||||| |||||||||||||| ||||||||  |||||||  |||||
seq2  ATGAAACAATTACAAGGTTGTAAATAACGCCTAAACCATGATAATACTAT  100

seq1  CCCTCGTACAATCGCAAACGCATTAGTAAATTTAC-AATGGGC-ATTCAT  142
      ||||||||||||||||||||||||||| || |||| ||||||| ||||||
seq2  CCCTCGTACAATCGCAAACGCATTAGTTAAATTACAAATGGGCAATTCAT  150

seq1  ATTACTTTATAATCCTCGTTTCTGCAACTGGTTACGTGGCCTT-AATTGG  191
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATTACTTTATAATCCTCGTTTCTGCAACTGGTTACGTGGCCTTAAATTGG  200

seq1  TATTTATAACTACCTTCCTCTACTACCCATTCTGTATTTCCTTCACCTTC  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATAACTACCTTCCTCTACTACCCATTCTGTATTTCCTTCACCTTC  250

seq1  AGCCAGCACCTCAGCAGGTCTTGGCTCTTTTCCTGGAGGATTGACCCATA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCACCTCAGCAGGTCTTGGCTCTTTTCCTGGAGGATTGACCCATA  300

seq1  CCTTCATTCCTGATGGGTCTGCGTCCTTTGTCATCCTGCTTGGATTAGGC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATTCCTGATGGGTCTGCGTCCTTTGTCATCCTGCTTGGATTAGGC  350

seq1  TGTTGTAGTTTCCCATTGACTTTAATCACAGGACATGGTAGTACTAAGAG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTAGTTTCCCATTGACTTTAATCACAGGACATGGTAGTACTAAGAG  400

seq1  ACGCCCTAAGGGATCTCCTGCACTCCAGACATAATCTTGCTTACCACCAT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCCTAAGGGATCTCCTGCACTCCAGACATAATCTTGCTTACCACCAT  450

seq1  TGTGAAGAGGTAATCCAATTTCCCCATGGTAATCTGGATCTATCACCCCT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGAGGTAATCCAATTTCCCCATGGTAATCTGGATCTATCACCCCT  500

seq1  CCTAACACTGTTATTCCTTTTTTAGCCTGTTGGTTTAAGGGCA  534
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACACTGTTATTCCTTTTTTAGCCTGTTGGTTTAAGGGCA  543

seq1: chr7_52739350_52739495
seq2: B6Ng01-017M14.g_115_247 (reverse)

seq1  AGCACTTGGGAGGCAGAGGCAGGCGGATTTTTGAGTTCGAGGCCAGCCTG  50
      |||||||||||||||||| ||||| |||||||||||  ||||||||||||
seq2  AGCACTTGGGAGGCAGAGACAGGCAGATTTTTGAGTCAGAGGCCAGCCTG  50

seq1  GTCTACAAAGTGAGTTCCAGGACACCCAGGGCTACACAGAGAAACCCTGT  100
      ||||||||||||||||||||||||  || | ||  |||||||||||||||
seq2  GTCTACAAAGTGAGTTCCAGGACAGTCAAGACT--ACAGAGAAACCCTGT  98

seq1  CTCAAAAAAACCAAAAAAATAACCCAAAAAACAAAAAAAGAAGTAT  146
      |||||||    |||||       | || |||||||||||| |||||
seq2  CTCAAAA----CAAAA-------CAAACAAACAAAAAAAGCAGTAT  133