BAC Information

Click to search

BAC

Clone NameB6Ng01-017N07
Chromosome7 (Build37)
Map Location 73,173,231 - 73,270,638
singlet/doubletdoublet
Overlap genePcsk6, Snrpa1, H47, Chsy1
Upstream geneTjp1, Gm1693, EG665234, Tarsl2, Tm2d3, LOC665241
Downstream geneLrrk1, Aldh1a3, Asb7, Lins2, Lass3, Adamts17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017N07.bB6Ng01-017N07.g
ACCDH851394DH851395
length955295
definitionDH851394|Mus musculus domesticus DNA, BAC clone: B6Ng01-017N07, 5' end.DH851395|Mus musculus domesticus DNA, BAC clone: B6Ng01-017N07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,269,683 - 73,270,638)(73,173,231 - 73,173,525)
sequence
gaattctgctcttacctcataagaccagacacactgcacgcctgcgaatc
tccggacacatctccccacctctacatcctcatgggtggtgtacatttcc
cggagacacttgccaatgtgtggtgccattctccgaagcacttcccggct
cagaatcacaccaggcccgcccatgcagaagttctctccaggctcaaggg
ccagcttccccatttcttctgtggtgcccagtcctgtctgcccgaggaag
aggggctcgctgctattcaaactcctcaggaaactctccagacgatctcc
cttgatgtaaacgtcatcgtctgccctcataaaccactcgtacttgtcca
ggtagtgatcgtgcatgtacttgagcatcatgaaagacttcttctggggt
gggtaggagtcatccacaccccgcaggggcaccactggaatgggtataga
tgtatctgaaccctcgctagagaagaactccaccttcccgggaattgtct
tggaccatgttctgtaattaaaataaatacagattagaggacaattattt
tcagaaatgcatgtatctgcttattttgaatcattatgtgactgcttaaa
tttggtctgcttgcctccttcaatggagactccactgactccagattcat
tttcataagaaccccaagtgaagggagggtaaggtattgttaagtttcta
cttacagctggaaaccaaactgactcagcaagatctaggtagccaaactt
ttggatttcatcaactcctactgacaagccctcagctctgtaagatggct
acgcaggtgaagaaacaaactgccaagccctcatcaccaaactgagttgg
gtccccagaggccacgtggttgaaagcgagaactgactccagtacttctg
catttgcaccacggcatgacacgccccaccactcctacaaagaaataaat
gtaga
aaaaccagcctgatcaacttgtagaatttctgtctcaaaaaaacatatgt
gtgggcaatattgctcagcggtaaagcgtttgtgcagccctagctagagt
caatcctagccttggaaagaaaggagaaacagagagagagagagagagag
agagagagagagagagagagagagagaagaagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaaagaaggaggaggaggaagaggaggagaagaggagaggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_73269683_73270638
seq2: B6Ng01-017N07.b_50_1004 (reverse)

seq1  TTTACATTTTATTTACTTTGTGGGAGTGTGTGGGCGTGTGCATGCCGTGG  50
      | |||| ||||||| |||||| ||||||   |||||||| ||||||||||
seq2  TCTACA-TTTATTT-CTTTGTAGGAGTGGTGGGGCGTGT-CATGCCGTGG  47

seq1  TGCAGATGCAGAAGTACTTGGAGTCAGTTCTCGCTTTCAACCACGTGGCC  100
      |||| |||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGCAAATGCAGAAGTAC-TGGAGTCAGTTCTCGCTTTCAACCACGTGGCC  96

seq1  TCTGGGGACCAAACTCAGTTTGGTGATGA-GGCTTGGCAGTTTGTTTCTT  149
      |||||||||| |||||||||||||||||| ||||||||||||||||||||
seq2  TCTGGGGACCCAACTCAGTTTGGTGATGAGGGCTTGGCAGTTTGTTTCTT  146

seq1  CACCTGCGTAGCCATCTTACAGAGCTGAGGGCTTGTCAGTAGGAGTTGAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCGTAGCCATCTTACAGAGCTGAGGGCTTGTCAGTAGGAGTTGAT  196

seq1  GAAATCCAAAAG-TTGGCTACCTAGATCTTGCTGAGTCAGTTTGGTTTCC  248
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAAATCCAAAAGTTTGGCTACCTAGATCTTGCTGAGTCAGTTTGGTTTCC  246

seq1  AGCTGTAAGTAG-AACTTAACAATACCTTACCCTCCCTTCACTTGGGGTT  297
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGCTGTAAGTAGAAACTTAACAATACCTTACCCTCCCTTCACTTGGGGTT  296

seq1  CTTATGAAAATGAATCTGGAGTCAGTGGAGTCTCCATTGAAGGAGGCAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGAAAATGAATCTGGAGTCAGTGGAGTCTCCATTGAAGGAGGCAAG  346

seq1  CAGACCAAATTTAAGCAGTCACATAATGATTCAAAATAAGCAGATACATG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCAAATTTAAGCAGTCACATAATGATTCAAAATAAGCAGATACATG  396

seq1  CATTTCTGAAAATAATTGTCCTCTAATCTGTATTTATTTTAATTACAGAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGAAAATAATTGTCCTCTAATCTGTATTTATTTTAATTACAGAA  446

seq1  CATGGTCCAAGACAATTCCCGGGAAGGTGGAGTTCTTCTCTAGCGAGGGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTCCAAGACAATTCCCGGGAAGGTGGAGTTCTTCTCTAGCGAGGGT  496

seq1  TCAGATACATCTATACCCATTCCAGTGGTGCCCCTGCGGGGTGTGGATGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATACATCTATACCCATTCCAGTGGTGCCCCTGCGGGGTGTGGATGA  546

seq1  CTCCTACCCACCCCAGAAGAAGTCTTTCATGATGCTCAAGTACATGCACG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACCCACCCCAGAAGAAGTCTTTCATGATGCTCAAGTACATGCACG  596

seq1  ATCACTACCTGGACAAGTACGAGTGGTTTATGAGGGCAGACGATGACGTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTACCTGGACAAGTACGAGTGGTTTATGAGGGCAGACGATGACGTT  646

seq1  TACATCAAGGGAGATCGTCTGGAGAGTTTCCTGAGGAGTTTGAATAGCAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCAAGGGAGATCGTCTGGAGAGTTTCCTGAGGAGTTTGAATAGCAG  696

seq1  CGAGCCCCTCTTCCTCGGGCAGACAGGACTGGGCACCACAGAAGAAATGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCCCCTCTTCCTCGGGCAGACAGGACTGGGCACCACAGAAGAAATGG  746

seq1  GGAAGCTGGCCCTTGAGCCTGGAGAGAACTTCTGCATGGGCGGGCCTGGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTGGCCCTTGAGCCTGGAGAGAACTTCTGCATGGGCGGGCCTGGT  796

seq1  GTGATTCTGAGCCGGGAAGTGCTTCGGAGAATGGCACCACACATTGGCAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTCTGAGCCGGGAAGTGCTTCGGAGAATGGCACCACACATTGGCAA  846

seq1  GTGTCTCCGGGAAATGTACACCACCCATGAGGATGTAGAGGTGGGGAGAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCCGGGAAATGTACACCACCCATGAGGATGTAGAGGTGGGGAGAT  896

seq1  GTGTCCGGAGATTCGCAGGCGTGCAGTGTGTCTGGTCTTATGAGGTAAGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCGGAGATTCGCAGGCGTGCAGTGTGTCTGGTCTTATGAGGTAAGA  946

seq1  GCAGAATTC  956
      |||||||||
seq2  GCAGAATTC  955

seq1: chr7_73173231_73173525
seq2: B6Ng01-017N07.g_73_367

seq1  AAAACCAGCCTGATCAACTTGTAGAATTTCTGTCTCAAAAAAACATATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAGCCTGATCAACTTGTAGAATTTCTGTCTCAAAAAAACATATGT  50

seq1  GTGGGCAATATTGCTCAGCGGTAAAGCGTTTGTGCAGCCCTAGCTAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCAATATTGCTCAGCGGTAAAGCGTTTGTGCAGCCCTAGCTAGAGT  100

seq1  CAATCCTAGCCTTGGAAAGAAAGGAGAAACAGAGAGAGAGAGAGAGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTAGCCTTGGAAAGAAAGGAGAAACAGAGAGAGAGAGAGAGAGAG  150

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAAGAAGAAGAAGAAGAAGAAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAAGAAGAAGAAGAAGAAGAAGAAG  200

seq1  AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA  250

seq1  GAAGAAAGAAGGAGGAGGAGGAAGAGGAGGAGAAGAGGAGAGGAG  295
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGAAGGAGGAGGAGGAAGAGGAGGAGAAGAGGAGAGGAG  295