BAC Information

Click to search

BAC

Clone NameB6Ng01-018A22
Chromosome7 (Build37)
Map Location 94,950,106 - 95,094,081
singlet/doubletdoublet
Overlap geneGrm5
Upstream geneEG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4, Tyr
Downstream geneCtsc, LOC100039756, Rab38, LOC100039924, LOC666598, EG621562
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018A22.bB6Ng01-018A22.g
ACCDH851562DH851563
length1,123994
definitionDH851562|Mus musculus domesticus DNA, BAC clone: B6Ng01-018A22, 5' end.DH851563|Mus musculus domesticus DNA, BAC clone: B6Ng01-018A22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,092,945 - 95,094,081)(94,950,106 - 94,951,097)
sequence
gaattctttttttttttctttctttcttttttttttaatcttttggcttg
tattctcttccttcaacaagaaatcattccacctgagaaaatgacaccta
atagcacatcatgaagtcacacacagccaccttctgtattttgcttttga
acttgagcatattatttacataattattccactatctatgtgtatttcaa
tgattccctatgtgtaattaataatatatgtatgaaattatcaagtgagt
ctttctgatagcagtgtcttcactctaatacaaagacctccttgagatta
attttctactgctattagaaaacatcatgaccaacaaaattttgaaagaa
aatatttaattgggcattaacttaatagagggttagagtccatgagagaa
gagcaaaaatatggcaaggggatcagcttgcatcttatctgcatgcatga
ggcagatagaaatgcattgggaaaaatggaagtcttttgaaacatttaag
tccactcccagtggcagagctactcaaacaaggccatagatcctaatctt
tcttaaacagttccaccgactgggaaccaagtattcaaacatacgagcct
agagttgccactcttgttcaaaccaccacacctatgttggggaactattg
tctaaaccaattggtagttaacaatgtaaagtttactctttcttcttctg
cataagattcaatatctactttggataaatgaatatttaataggatgaaa
tcattccacagcttgaaccatttaataaacattaccacagaacacacata
gatttgtgtattagaaatatggtaaagatcagagataaaagggtattaac
cttcatctgactttactgggatgatctgactagaaaacaaacagacagac
agatccagtaaatttagatatcagtgtgttctgaagaaagacaaaataaa
ctccatgacatcggtgataattatgaacggatcatgtaactgaagttaga
tgcaagatatggcacacattttactggctttgagacagtgcatgcatgta
tgtgctgatatatatgttggcagttccacagatataaaataaatagtctg
gtcaggtcttctcagttgtgagt
gaattcatcatattatgagactcaaaggggaaagagcactgaataaagat
agcagataagtacttgtcttagtcagggtttctattcctgcacaaacatc
atgaccaagaagcaagttggggaggaaagggtttattcggcttacacttc
catactgctgttcatcaccaaggaagtcaggactggaactcaaacaggtc
aggaagcaggagctgatgcagaggccatggagggatgttccttactggtt
tgcttctcctggcttgctcagcctgctttcttatagaaccaagattacca
tcccagagatggtcccacccacaaggggcctttcccccttgatcactaat
tgagaaaatgccttacagttggatatcatggaggcatttcctcaactgaa
gctccttttttgtgatagctccaactgtgtcaagttgacacaaaactagc
cagtacagtactttctaacaaaatatatgaacatatgagcatatatattt
tttctttcttttaactactttttatttacattttaaatgttatcccattt
tctggtttccccactgaaaactccctatcccatcccccgaaaccctgctc
accaacccacccactcctgcttcactgtcctggcattcccctacattggg
gcactgagccttctcaggaccaagggtctcttctcccactgatgtccatc
taggtcatcctctgctacatttgcagctgtagccttgggtccctcaatgt
gtactctttggttggtggttgggtgggttcctcagaaaattgaacatagt
aatactggaggagccagctataccaattcccgggaaatacccagaagatg
ctccaaaatataattaggacacatgctccactgtgttcatagcagcccta
tttattaatagccagaaagctgaaaaggaccccgacatccttcaacagaa
gatggatactgaaaatggggtcattttcacatggaatactactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_95092945_95094081
seq2: B6Ng01-018A22.b_42_1164 (reverse)

seq1  ACTCACAGACTGAGAAGACCTGTACAGACTTATTTATTTT-TATCTGTTG  49
      ||||||| ||||||||||||||  ||||| |||||||||| |||||||  
seq2  ACTCACA-ACTGAGAAGACCTGACCAGAC-TATTTATTTTATATCTGT--  46

seq1  GGATACTTTGCCAACATATATATCAGCACACTACATGCATGCACTGTCCT  99
      ||| ||  |||||||||||||||||||||| |||||||||||||||| ||
seq2  GGA-AC--TGCCAACATATATATCAGCACA-TACATGCATGCACTGT-CT  91

seq1  CAAAAGCCAGTAAAATGTGTGCCATATCTTTGCATTCTAACTTCAGTTAC  149
      | |||||||||||||||||||||||||| ||||| |||||||||||||||
seq2  C-AAAGCCAGTAAAATGTGTGCCATATC-TTGCA-TCTAACTTCAGTTAC  138

seq1  ATGATCCCCTTCATAATTATCACCCGATGTCATGGAGTTTATTTTGTCTT  199
      ||||| || ||||||||||||| |||||||||||||||||||||||||||
seq2  ATGAT-CCGTTCATAATTATCA-CCGATGTCATGGAGTTTATTTTGTCTT  186

seq1  TCTTCAGAACACACTGATATCTAAATTTACTGGATCTGTCTGTCTGTTTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGAACACACTGATATCTAAATTTACTGGATCTGTCTGTCTGTTTG  236

seq1  TTTTTCTAGTCAGATCATCCCAGTAAAGTCAGATGAAGGTTAATACCCTT  299
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTTCTAGTCAGATCATCCCAGTAAAGTCAGATGAAGGTTAATACCCTT  285

seq1  TTATCTCTGATCTTTACCATATTTCTAATACACAAATCTATGTGTGTTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCTGATCTTTACCATATTTCTAATACACAAATCTATGTGTGTTCT  335

seq1  GTGGTAATGTTTATTAAATGGTTCAAGCTGTGGAATGATTTCATCCTATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAATGTTTATTAAATGGTTCAAGCTGTGGAATGATTTCATCCTATT  385

seq1  AAATATTCATTTATCCAAAGTAGATATTGAATCTTATGCAGAAGAAGAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTCATTTATCCAAAGTAGATATTGAATCTTATGCAGAAGAAGAAA  435

seq1  GAGTAAACTTTACATTGTTAACTACCAATTGGTTTAGACAATAGTTCCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAACTTTACATTGTTAACTACCAATTGGTTTAGACAATAGTTCCCC  485

seq1  AACATAGGTGTGGTGGTTTGAACAAGAGTGGCAACTCTAGGCTCGTATGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGGTGTGGTGGTTTGAACAAGAGTGGCAACTCTAGGCTCGTATGT  535

seq1  TTGAATACTTGGTTCCCAGTCGGTGGAACTGTTTAAGAAAGATTAGGATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATACTTGGTTCCCAGTCGGTGGAACTGTTTAAGAAAGATTAGGATC  585

seq1  TATGGCCTTGTTTGAGTAGCTCTGCCACTGGGAGTGGACTTAAATGTTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCCTTGTTTGAGTAGCTCTGCCACTGGGAGTGGACTTAAATGTTTC  635

seq1  AAAAGACTTCCATTTTTCCCAATGCATTTCTATCTGCCTCATGCATGCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACTTCCATTTTTCCCAATGCATTTCTATCTGCCTCATGCATGCAG  685

seq1  ATAAGATGCAAGCTGATCCCCTTGCCATATTTTTGCTCTTCTCTCATGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATGCAAGCTGATCCCCTTGCCATATTTTTGCTCTTCTCTCATGGA  735

seq1  CTCTAACCCTCTATTAAGTTAATGCCCAATTAAATATTTTCTTTCAAAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAACCCTCTATTAAGTTAATGCCCAATTAAATATTTTCTTTCAAAAT  785

seq1  TTTGTTGGTCATGATGTTTTCTAATAGCAGTAGAAAATTAATCTCAAGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGGTCATGATGTTTTCTAATAGCAGTAGAAAATTAATCTCAAGGA  835

seq1  GGTCTTTGTATTAGAGTGAAGACACTGCTATCAGAAAGACTCACTTGATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTGTATTAGAGTGAAGACACTGCTATCAGAAAGACTCACTTGATA  885

seq1  ATTTCATACATATATTATTAATTACACATAGGGAATCATTGAAATACACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATACATATATTATTAATTACACATAGGGAATCATTGAAATACACA  935

seq1  TAGATAGTGGAATAATTATGTAAATAATATGCTCAAGTTCAAAAGCAAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGTGGAATAATTATGTAAATAATATGCTCAAGTTCAAAAGCAAAA  985

seq1  TACAGAAGGTGGCTGTGTGTGACTTCATGATGTGCTATTAGGTGTCATTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAGGTGGCTGTGTGTGACTTCATGATGTGCTATTAGGTGTCATTT  1035

seq1  TCTCAGGTGGAATGATTTCTTGTTGAAGGAAGAGAATACAAGCCAAAAGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGTGGAATGATTTCTTGTTGAAGGAAGAGAATACAAGCCAAAAGA  1085

seq1  TTAAAAAAAAAAGAAAGAAAGAAAAAAAAAAAGAATTC  1137
      ||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAAAAAGAAAGAAAGAAAAAAAAAAAGAATTC  1123

seq1: chr7_94950106_94951097
seq2: B6Ng01-018A22.g_64_1057

seq1  GAATTCATCATATTATGAGACTCAAAGGGGAAAGAGCACTGAATAAAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATATTATGAGACTCAAAGGGGAAAGAGCACTGAATAAAGAT  50

seq1  AGCAGATAAGTACTTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATAAGTACTTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATC  100

seq1  ATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTCGGCTTACACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTCGGCTTACACTTC  150

seq1  CATACTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAACAGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAACAGGTC  200

seq1  AGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCCTTACTGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCCTTACTGGTT  250

seq1  TGCTTCTCCTGGCTTGCTCAGCCTGCTTTCTTATAGAACCAAGATTACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTCCTGGCTTGCTCAGCCTGCTTTCTTATAGAACCAAGATTACCA  300

seq1  TCCCAGAGATGGTCCCACCCACAAGGGGCCTTTCCCCCTTGATCACTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAGATGGTCCCACCCACAAGGGGCCTTTCCCCCTTGATCACTAAT  350

seq1  TGAGAAAATGCCTTACAGTTGGATATCATGGAGGCATTTCCTCAACTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAATGCCTTACAGTTGGATATCATGGAGGCATTTCCTCAACTGAA  400

seq1  GCTCCTTTTTTGTGATAGCTCCAACTGTGTCAAGTTGACACAAAACTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTTTTTGTGATAGCTCCAACTGTGTCAAGTTGACACAAAACTAGC  450

seq1  CAGTACAGTACTTTCTAACAAAATATATGAACATATGAGCATATATATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACAGTACTTTCTAACAAAATATATGAACATATGAGCATATATATTT  500

seq1  TTTCTTTCTTTTAACTACTTTTTATTTACATTTTAAATGTTATCCCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTTAACTACTTTTTATTTACATTTTAAATGTTATCCCATTT  550

seq1  TCTGGTTTCCCCACTGAAAACTCCCTATCCCATCCCCCGAAACCCTGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTTCCCCACTGAAAACTCCCTATCCCATCCCCCGAAACCCTGCTC  600

seq1  ACCAACCCACCCACTCCTGCTTCACTGTCCTGGCATTCCCCTACATTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCCACCCACTCCTGCTTCACTGTCCTGGCATTCCCCTACATTGGG  650

seq1  GCACTGAGCCTTCTCAGGACCAAGGGTCTCTTCTCCCACTGATGTCCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGAGCCTTCTCAGGACCAAGGGTCTCTTCTCCCACTGATGTCCATC  700

seq1  TAGGTCATCCTCTGCTACATTTGCAGCTGTAGCCTTGGGTCCCTCAATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCATCCTCTGCTACATTTGCAGCTGTAGCCTTGGGTCCCTCAATGT  750

seq1  GTACTCTTTGGTTGGTGGTTGGGT-GGTTCCTCAGAAAATTGAACATAGT  799
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTACTCTTTGGTTGGTGGTTGGGTGGGTTCCTCAGAAAATTGAACATAGT  800

seq1  AATACTGGAGGAGCCAGCTATACCAA-TCCCGGG-AATACCCAGAAGATG  847
      |||||||||||||||||||||||||| ||||||| |||||||||||||||
seq2  AATACTGGAGGAGCCAGCTATACCAATTCCCGGGAAATACCCAGAAGATG  850

seq1  CTCCAAAATATAATAAGGACACATGCTCCACTGTGTTCATAGCAGCCTTA  897
      |||||||||||||| |||||||||||||||||||||||||||||||| ||
seq2  CTCCAAAATATAATTAGGACACATGCTCCACTGTGTTCATAGCAGCCCTA  900

seq1  TTTA-TAATAGCCAG-AAGCTGAAAAGAACCCCGACATCCCTCAACAGAG  945
      |||| |||||||||| ||||||||||| |||||||||||| |||||||| 
seq2  TTTATTAATAGCCAGAAAGCTGAAAAGGACCCCGACATCCTTCAACAGAA  950

seq1  GAATGGATACAGAAAATGTGGTACATTTACACAATGGAATACTACTC  992
      | |||||||| ||||||| ||| ||||| ||| ||||||||||||||
seq2  G-ATGGATACTGAAAATGGGGT-CATTTTCAC-ATGGAATACTACTC  994