BAC Information

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BAC

Clone NameB6Ng01-018B14
Chromosome7 (Build37)
Map Location 30,399,107 - 30,552,389
singlet/doubletdoublet
Overlap gene1700067C01Rik
Upstream geneC330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7, Capn12, Actn4, Eif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik
Downstream geneZfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27, Zfp74, LOC625437, LOC100043796, Zfp568, Zfp14, LOC100043798, Zfp82, Zfp566, Zfp260, Zfp382, Zfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018B14.bB6Ng01-018B14.g
ACCDH851594DH851595
length1,081544
definitionDH851594|Mus musculus domesticus DNA, BAC clone: B6Ng01-018B14, 5' end.DH851595|Mus musculus domesticus DNA, BAC clone: B6Ng01-018B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,399,107 - 30,400,198)(30,551,839 - 30,552,389)
sequence
gaattctgtcacagtagttaaaaaaaaaaactgggtaggacattttaagg
ccaacagtaaacactgaaatcctgtttaaaactaaggaggtcacaatgaa
acaccacaaacatcaaaatcgacatgaaacagacatgtttttataaaatt
aaaggtgtgtgttaaggatgtgtgtgtatttccagccagaggaattaaag
gtgtgtgttaagggctgagccacaacacagctagaaacagggttttcccc
cccagtaactaacacaaacttggggttcagagtgcgatcaaatatcctgc
aacaaaagaatatctttgttatgatatattccaaaaatatttgtaaaaaa
ctcactctgtgagatcagcataacttatttgattcaatcaacctttttta
aaaaaattatttcaaattttagtttcctaatgtgactttgtagtgccagg
gaaatgttactaatcctcctcccaaaaaacagacaggagctgatctgatg
caactcacagcagcatctttattctatttgagctagcttgggccccaccc
ccaacacaccactgtcatgcagaatggttttagtgataggggagctctat
ctatcagggcaaggctttatatatagtaagcagcaactgggaggtaagtg
tgcatgtatctaattggaaaggcactgtggtctttaacataagtggctgg
tgctgggagtcatatcataaatttaatttctgctcccctctgcattggta
gctattaggcaaggggtgggcttgtaacctgggggtgcaggattgttggg
agaataacctggaaacactggtcttgttgagggtgtaatctggagaccct
ggccttgtttggggataagcctagagactggagctaggctcagttttgtt
gtggggggggcaacttggaaactaatgctaggtaccatgcttgttattta
cttgagttaaaatggagactgaactaaaagattcgtctctcaattttcta
tcaatttttggaaacacttgaatgtacagttgtgtctgtcttaagctatt
ttgctccgctaagagctaaacactgggtatt
tccgtgaatcggcttagagcagatgttgtggcaggggttacacgaaggag
gatttggtgccctggcttgtttttcccacaaggcactgcggcttggactc
ctcggtttgaactacatttcccagaaaacaacgggtgcaagcaatttaca
gttcagccccagtccccaaacaccccgcagggttctcagtgctcggcaaa
atgaattcaacctaaatccaagggcggtgacaggaggagggctctaaaca
aatgtttcaaatttggagttcctgatttggacatggagaagccgccagtt
gttactggaatgtaggcctgtgggttagtgaagagcacaggagcactttg
tgtgtctgtgtgaaggaatgtgcgggagcgcgtgcatgtgtgaaaggagg
agaaggggttggaagagaaagacagaggaaagaggcagagacaacgggtg
gtgggtaagatgggaagggctgggatgtttcttctgaattggaagcacag
tgagaagctgtgaccagtgtgtgacttactggccgtgagggaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_30399107_30400198
seq2: B6Ng01-018B14.b_43_1123

seq1  GAATTCTGTCACAGTAGTTAAAAAAAAAAACTGGGTAGGACATTTTAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCACAGTAGTTAAAAAAAAAAACTGGGTAGGACATTTTAAGG  50

seq1  CCAACAGTAAACACTGAAATCCTGTTTAAAACTAAGGAGGTCACAATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGTAAACACTGAAATCCTGTTTAAAACTAAGGAGGTCACAATGAA  100

seq1  ACACCACAAACATCAAAATCGACATGAAACAGACATGTTTTTATAAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCACAAACATCAAAATCGACATGAAACAGACATGTTTTTATAAAATT  150

seq1  AAAGGTGTGTGTTAAGGATGTGTGTGTATTTCCAGCCAGAGGAATTAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGTGTGTTAAGGATGTGTGTGTATTTCCAGCCAGAGGAATTAAAG  200

seq1  GTGTGTGTTAAGGGCTGAGCCACAACACAGCTAGAAACAGGGTTTTCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTTAAGGGCTGAGCCACAACACAGCTAGAAACAGGGTTTTCCCC  250

seq1  CCCAGTAACTAACACAAACTTGGGGTTCAGAGTGCGATCAAATATCCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTAACTAACACAAACTTGGGGTTCAGAGTGCGATCAAATATCCTGC  300

seq1  AACAAAAGAATATCTTTGTTATGATATATTCCAAAAATATTTGTAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAGAATATCTTTGTTATGATATATTCCAAAAATATTTGTAAAAAA  350

seq1  CTCACTCTGTGAGATCAGCATAACTTATTTGATTCAATCAACCTTTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCTGTGAGATCAGCATAACTTATTTGATTCAATCAACCTTTTTTA  400

seq1  AAAAAATTATTTCAAATTTTAGTTTCCTAATGTGACTTTGTAGTGCCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTATTTCAAATTTTAGTTTCCTAATGTGACTTTGTAGTGCCAGG  450

seq1  GAAATGTTACTAATCCTCCTCCCAAAAAACAGACAGGAGCTGATCTGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTTACTAATCCTCCTCCCAAAAAACAGACAGGAGCTGATCTGATG  500

seq1  CAACTCACAGCAGCATCTTTATTCTATTTGAGCTAGCTTGGGCCCCACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCACAGCAGCATCTTTATTCTATTTGAGCTAGCTTGGGCCCCACCC  550

seq1  CCAACACACCACTGTCATGCAGAATGGTTTTAGTGATAGGGGAGCTCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACACCACTGTCATGCAGAATGGTTTTAGTGATAGGGGAGCTCTAT  600

seq1  CTATCAGGGCAAGGCTTTATATATAGTAAGCAGCAACTGGGAGGTAAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGGGCAAGGCTTTATATATAGTAAGCAGCAACTGGGAGGTAAGTG  650

seq1  TGCATGTATCTAATTGGAAAGGCACTGTGGTCTTTAACATAAGTGGCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTATCTAATTGGAAAGGCACTGTGGTCTTTAACATAAGTGGCTGG  700

seq1  TGCTGGGAGTCATATCATAAATTTAATTTCTGCTCCCCTCTGCATTGGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAGTCATATCATAAATTTAATTTCTGCTCCCCTCTGCATTGGTA  750

seq1  GCTATTAGGCAAGGGGTGGGCTTGTAACCTGGGGGTGCAGGATTGTTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTAGGCAAGGGGTGGGCTTGTAACCTGGGGGTGCAGGATTGTTGGG  800

seq1  AGAATAACCTGGAAACACTGGTCTTGTTGAGGGTGTAATCTGGAGACCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAACCTGGAAACACTGGTCTTGTTGAGGGTGTAATCTGGAGACCCT  850

seq1  GGCCTTG-TTGGGGATAAGCCTAGAGACTGGAGCTAGGCTCAGGTTTTGT  899
      ||||||| |||||||||||||||||||||||||||||||||| |||||||
seq2  GGCCTTGTTTGGGGATAAGCCTAGAGACTGGAGCTAGGCTCA-GTTTTGT  899

seq1  TGTGGGGGGGGCAACTTGGAAACTAATGCTAGGTACCA-GCCTGTTAATT  948
      |||||||||||||||||||||||||||||||||||||| || |||| |||
seq2  TGTGGGGGGGGCAACTTGGAAACTAATGCTAGGTACCATGCTTGTT-ATT  948

seq1  TACCTGAGTTTAAAATGGAGACTGAACTTAAAAGATTTGGTCTCTCAATT  998
      ||| |||| |||||||||||||||||| ||||||| || ||||||||| |
seq2  TACTTGAG-TTAAAATGGAGACTGAAC-TAAAAGA-TTCGTCTCTCAA-T  994

seq1  TTTCTATCAGAGTTTTGGAAAACAACTTGAATGTGACAGTTGTGTCTGTC  1048
      ||||||||| | |||||||||   |||||||||| |||||||||||||||
seq2  TTTCTATCA-ATTTTTGGAAA--CACTTGAATGT-ACAGTTGTGTCTGTC  1040

seq1  TTAGAGCTATTTTGCTCCTGTAATAGAGCATAACACTGGGTAAT  1092
      ||| ||||||||||||||  ||  |||||  ||||||||||| |
seq2  TTA-AGCTATTTTGCTCCGCTA--AGAGCTAAACACTGGGTATT  1081

seq1: chr7_30551839_30552389
seq2: B6Ng01-018B14.g_66_615 (reverse)

seq1  TGTCCCTCACGGCCTGTAATGTCACCCACTGGTCACAGCTTCTCACTGTG  50
      |||||||||||||| |||| ||||| ||||||||||||||||||||||||
seq2  TGTCCCTCACGGCCAGTAA-GTCACACACTGGTCACAGCTTCTCACTGTG  49

seq1  CTTCCAATTCAGAAGAAACATCCCAGCCCTTCCCATCTTACCCACCACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAATTCAGAAGAAACATCCCAGCCCTTCCCATCTTACCCACCACCC  99

seq1  GTTGTCTCTGCCTCTTTCCTCTGTCTTTCTCTTCCAACCCCTTCTCCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTCTGCCTCTTTCCTCTGTCTTTCTCTTCCAACCCCTTCTCCTCC  149

seq1  TTTCACACATGCACGCGCTCCCGCACATTCCTTCACACAGACACACAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACACATGCACGCGCTCCCGCACATTCCTTCACACAGACACACAAAG  199

seq1  TGCTCCTGTGCTCTTCACTAACCCACAGGCCTACATTCCAGTAACAACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTGTGCTCTTCACTAACCCACAGGCCTACATTCCAGTAACAACTG  249

seq1  GCGGCTTCTCCATGTCCAAATCAGGAACTCCAAATTTGAAACATTTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCTTCTCCATGTCCAAATCAGGAACTCCAAATTTGAAACATTTGTTT  299

seq1  AGAGCCCTCCTCCTGTCACCGCCCTTGGATTTAGGTTGAATTCATTTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCCTCCTCCTGTCACCGCCCTTGGATTTAGGTTGAATTCATTTTGC  349

seq1  CGAGCACTGAGAACCCTGCGGGGTGTTTGGGGACTGGGGCTGAACTGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCACTGAGAACCCTGCGGGGTGTTTGGGGACTGGGGCTGAACTGTAA  399

seq1  ATTGCTTGCACCCGTTGTTTTCTGGGAAATGTAGTTCAAACCGAGGAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTGCACCCGTTGTTTTCTGGGAAATGTAGTTCAAACCGAGGAGTC  449

seq1  CAAGCCGCAGTGCCTTGTGGGAAAAACAAGCCAGGGCACCAAATCCTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCGCAGTGCCTTGTGGGAAAAACAAGCCAGGGCACCAAATCCTCCT  499

seq1  TCGTGTAACCCCTGCCACAACATCTGCTCTAAGCCGATTCACGGAGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGTAACCCCTGCCACAACATCTGCTCTAAGCCGATTCACGGAGAATT  549

seq1  C  551
      |
seq2  C  550