BAC Information

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BAC

Clone NameB6Ng01-018K15
Chromosome7 (Build37)
Map Location 113,961,532 - 114,098,819
singlet/doubletdoublet
Overlap geneOlfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651
Upstream gene9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660, LOC100042097, LOC668128, LOC634394, EG209380, EG668139, Gm1966, LOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700
Downstream geneOlfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik, Syt9, Olfml1, Ppfibp2, 5330417H12Rik, Cyb5r2, Ovch2, LOC100042310, Olfr467, Olfr468-ps1, Olfr469, GA_x5J8B7W6B6J-2580381-2580079, Olfr470, Olfr471, LOC626661, Olfr472, Olfr473, LOC669301, Olfr474
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018K15.bB6Ng01-018K15.g
ACCDH851999DH852000
length1,1881,023
definitionDH851999|Mus musculus domesticus DNA, BAC clone: B6Ng01-018K15, 5' end.DH852000|Mus musculus domesticus DNA, BAC clone: B6Ng01-018K15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,097,611 - 114,098,819)(113,961,532 - 113,962,558)
sequence
gaattctaccgtgtaattgagtgaccatggggtacatggggctttgcttg
gtagcaagaggaactaggaatgggggcgccagagagttggtgggcaggga
gaccgccgagttgacatcacccagcataagctctgtggcccgctgttgct
ggcactagagctgaacaaggtccggccttgccggggagttggcaagttga
gagaagcaggagctcgaagagttggctgatttgttttttagtatttcccg
caacagattattattcattaatgtgggttgaagactggcttttataatca
aacatagctcattttttccaattttttattaggtatttacttcatttata
tttcgaatgatatcctgaaagtcccctatatcctcctccccttctcccct
ccccaccccctcctacttcgtggccctggtgtttcccctgtactggggca
agccattgggaagagaggtctcttggtcttaacaaacatagctcatttta
attagctttaaaatttagcaaaatgagagagaatttccttcttagtgtaa
taggaatactatgaagtagtgcttgtattgccttctcacgacagagggaa
atcacacacacacacacacacacacacacacacacacacacacacacaca
cacacaatttctgctgctttatttccctcattgtgttggagcttcaacac
ataaaatttcggtgaaataatggaaggtcagactgtagaaagttggaaat
tgctttgctactcattatagcaactctttttaggtaaacacaacagacaa
acaaacataaaaaaaaccaacattggcattgacaaaagactaagcacttt
ttgctcatgcacaacctgtcctgaatgtgaggaatttcccaagtttttcc
ggaacattcaacttttatctgttttatgtttgatttaaaaagtagagtcg
gatcctacaagtagttatgctttatgtagtaataagaaaatagaagagaa
atgggttctgtttgactcaattagatgttgatggagaaagttctataaaa
gtgatcggcctacagttaaaatgacaggggtgctaaattcatcacacatt
tgaagatactttataatttaaataagccttgcctgccacattgatcgttt
cctttgtttctgcctccacaacccagccatttgtttta
gaattcccttagaaaggcttctactaagaatgcatctgtttctaggaagc
agaaaagactactcagaatggaaccctggaattctaccttggaaagtgga
ttcatcttggtggggattctggatggcagtggctctcctgaactgctctg
tgccacagttacaaccctgtacatgttggcactgatcagcaatggacttc
tactcctggtcatcacagtggatgcccggcttcacgtacccatgtacctc
ctactgaggcagctgtctctcattgacctcctcttcacatcagttgtaac
tcccaacactgttgtggattttctgctcagagacaacaccatatcctttg
agggatgtgcccttcaattgttctcagcaatgacattgggtggtgcagag
gacctccttctggccttcatggcctatgataggtatgtggccatttgtca
tcctctaaactacatgatcttcatgagtccaaaggcctgcaggctcatgg
tggccatatcatggatcctagcatctcttagtgccctaggtcacacagtg
tacacaatgcacttccctttttgcatgtcccaggaaatcagacacctgct
ctgtgaggttcctccattgttgaaattggcttgtgcagacacatctcaat
atgagctcatggtttatgtgacaggagtgatattcctattgctccccctc
tctgccattatttacctcctactcactaattctattcactgtgctgcaca
tgccttcaaatgagggcaggaagaaagcccttgtcacctgttcctcccac
ttgactgtggttgggatgttctatgggggtgccactttcatgtatgtgct
gcccagttccttccacagtcctaagcaagacaatatcatctctgtgtcta
ttacattgtcacaccagctctgaaccccctcatttacagcctgagaaata
tgaggtgatggagctgttagagagtctggggaaactaattctgccagcac
ccgcactgtttaggaaggattca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_114097611_114098819
seq2: B6Ng01-018K15.b_48_1235 (reverse)

seq1  TAAAACAAAATGGCTGGGCTTGTCGAGGCAGATAAACAAAGAGAAACAGA  50
      |||||| ||||||||||| |||| |||||||  |||||||| ||||| ||
seq2  TAAAAC-AAATGGCTGGG-TTGTGGAGGCAG--AAACAAAG-GAAAC-GA  44

seq1  TCAAAGGTGAGCAGGCAAAGGCCTAATTAAAATATATAAAATGTACTTCC  100
      || || ||| |||||| ||||| || ||||| |||| |  ||   |||| 
seq2  TC-AATGTG-GCAGGC-AAGGCTTATTTAAATTATAAAGTAT---CTTC-  87

seq1  AACATGTTAGATGAATATAGCACACCTGTCATTTTTAAACTCTGGGCAGA  150
       | ||||  ||||||| |||||| |||||||||||  |||| | ||| ||
seq2  -AAATGTGTGATGAATTTAGCACCCCTGTCATTTT--AACTGTAGGCCGA  134

seq1  TCACATTTCATGAACTTTCTCATTCAACATTCTTACTGAGTCAAACAGAA  200
      |||| |||   ||||||||||  |||||| ||| | ||||||||||||||
seq2  TCACTTTTATAGAACTTTCTCCATCAACA-TCTAATTGAGTCAAACAGAA  183

seq1  CCCATTTCTCTCCTATTTTCTTATTACTACATTAAAGCATATACTACTTG  250
      ||||||||||| ||||||||||||||||||| ||||||||| ||||||| 
seq2  CCCATTTCTCTTCTATTTTCTTATTACTACA-TAAAGCATA-ACTACTT-  230

seq1  GTAGGATCCGACTTCTACCTTTTTAAATCAAACATAAAACAGATAAAAGT  300
      |||||||||||| |||| ||||||||||||||||||||||||||||||||
seq2  GTAGGATCCGAC-TCTA-CTTTTTAAATCAAACATAAAACAGATAAAAGT  278

seq1  TGAATGTTCCGGAAAAACTTGGGAAATTCCTCACATTCAGGACAGGTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTTCCGGAAAAACTTGGGAAATTCCTCACATTCAGGACAGGTTGT  328

seq1  GCATGAGC-AAAAGTGCTTAGTCTTTTGTCAATGCCAATGTTGGTTTTTT  399
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGCAAAAAGTGCTTAGTCTTTTGTCAATGCCAATGTTGGTTTTTT  378

seq1  TTATGTTTGTTTGTCTGTTGTGTTTACCTAAAATGAGTTGCTATAATGAG  449
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTATGTTTGTTTGTCTGTTGTGTTTACCTAAAAAGAGTTGCTATAATGAG  428

seq1  TAGCAAAGCAATTTCCAACTTTCTACAGTCTGACCTTCCATTATTTCACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAGCAATTTCCAACTTTCTACAGTCTGACCTTCCATTATTTCACC  478

seq1  GAAATTTTATGTGTTGAAGCTCCAACACAATGAGGGAAATAAAGCAGCAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTTATGTGTTGAAGCTCCAACACAATGAGGGAAATAAAGCAGCAG  528

seq1  AAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  578

seq1  TGTGTGTGATTTCCCTCTGTCGTGAGAAGGCAATACAAGCACTACTTCAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGATTTCCCTCTGTCGTGAGAAGGCAATACAAGCACTACTTCAT  628

seq1  AGTATTCCTATTACACTAAGAAGGAAATTCTCTCTCATTTTGCTAAATTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTCCTATTACACTAAGAAGGAAATTCTCTCTCATTTTGCTAAATTT  678

seq1  TAAAGCTAATTAAAATGAGCTATGTTTGTTAAGACCAAGAGACCTCTCTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTAATTAAAATGAGCTATGTTTGTTAAGACCAAGAGACCTCTCTT  728

seq1  CCCAATGGCTTGCCCCAGTACAGGGGAAACACCAGGGCCACGAAGTAGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATGGCTTGCCCCAGTACAGGGGAAACACCAGGGCCACGAAGTAGGA  778

seq1  GGGGGTGGGGAGGGGAGAAGGGGAGGAGGATATAGGGGACTTTCAGGATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGGGGAGGGGAGAAGGGGAGGAGGATATAGGGGACTTTCAGGATA  828

seq1  TCATTCGAAATATAAATGAAGTAAATACCTAATAAAAAATTGGAAAAAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCGAAATATAAATGAAGTAAATACCTAATAAAAAATTGGAAAAAAT  878

seq1  GAGCTATGTTTGATTATAAAAGCCAGTCTTCAACCCACATTAATGAATAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTATGTTTGATTATAAAAGCCAGTCTTCAACCCACATTAATGAATAA  928

seq1  TAATCTGTTGCGGGAAATACTAAAAAACAAATCAGCCAACTCTTCGAGCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGTTGCGGGAAATACTAAAAAACAAATCAGCCAACTCTTCGAGCT  978

seq1  CCTGCTTCTCTCAACTTGCCAACTCCCCGGCAAGGCCGGACCTTGTTCAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTTCTCTCAACTTGCCAACTCCCCGGCAAGGCCGGACCTTGTTCAG  1028

seq1  CTCTAGTGCCAGCAACAGCGGGCCACAGAGCTTATGCTGGGTGATGTCAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTGCCAGCAACAGCGGGCCACAGAGCTTATGCTGGGTGATGTCAA  1078

seq1  CTCGGCGGTCTCCCTGCCCACCAACTCTCTGGCGCCCCCATTCCTAGTTC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGCGGTCTCCCTGCCCACCAACTCTCTGGCGCCCCCATTCCTAGTTC  1128

seq1  CTCTTGCTACCAAGCAAAGCCCCATGTACCCCATGGTCACTCAATTACAC  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCTACCAAGCAAAGCCCCATGTACCCCATGGTCACTCAATTACAC  1178

seq1  GGTAGAATTC  1209
      ||||||||||
seq2  GGTAGAATTC  1188

seq1: chr7_113961532_113962558
seq2: B6Ng01-018K15.g_69_1091

seq1  GAATTCCCTTAGAAAGGCTTCTACTAAGAATGCATCTGTTTCTAGGAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTAGAAAGGCTTCTACTAAGAATGCATCTGTTTCTAGGAAGC  50

seq1  AGAAAAGACTACTCAGAATGGAACCCTGGAATTCTACCTTGGAAAGTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGACTACTCAGAATGGAACCCTGGAATTCTACCTTGGAAAGTGGA  100

seq1  TTCATCTTGGTGGGGATTCTGGATGGCAGTGGCTCTCCTGAACTGCTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTTGGTGGGGATTCTGGATGGCAGTGGCTCTCCTGAACTGCTCTG  150

seq1  TGCCACAGTTACAACCCTGTACATGTTGGCACTGATCAGCAATGGACTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAGTTACAACCCTGTACATGTTGGCACTGATCAGCAATGGACTTC  200

seq1  TACTCCTGGTCATCACAGTGGATGCCCGGCTTCACGTACCCATGTACCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCTGGTCATCACAGTGGATGCCCGGCTTCACGTACCCATGTACCTC  250

seq1  CTACTGAGGCAGCTGTCTCTCATTGACCTCCTCTTCACATCAGTTGTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGAGGCAGCTGTCTCTCATTGACCTCCTCTTCACATCAGTTGTAAC  300

seq1  TCCCAACACTGTTGTGGATTTTCTGCTCAGAGACAACACCATATCCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACACTGTTGTGGATTTTCTGCTCAGAGACAACACCATATCCTTTG  350

seq1  AGGGATGTGCCCTTCAATTGTTCTCAGCAATGACATTGGGTGGTGCAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGTGCCCTTCAATTGTTCTCAGCAATGACATTGGGTGGTGCAGAG  400

seq1  GACCTCCTTCTGGCCTTCATGGCCTATGATAGGTATGTGGCCATTTGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCCTTCTGGCCTTCATGGCCTATGATAGGTATGTGGCCATTTGTCA  450

seq1  TCCTCTAAACTACATGATCTTCATGAGTCCAAAGGCCTGCAGGCTCATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTAAACTACATGATCTTCATGAGTCCAAAGGCCTGCAGGCTCATGG  500

seq1  TGGCCATATCATGGATCCTAGCATCTCTTAGTGCCCTAGGTCACACAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCATATCATGGATCCTAGCATCTCTTAGTGCCCTAGGTCACACAGTG  550

seq1  TACACAATGCACTTCCCTTTTTGCATGTCCCAGGAAATCAGACACCTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAATGCACTTCCCTTTTTGCATGTCCCAGGAAATCAGACACCTGCT  600

seq1  CTGTGAGGTTCCTCCATTGTTGAAATTGGCTTGTGCAGACACATCTCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGGTTCCTCCATTGTTGAAATTGGCTTGTGCAGACACATCTCAAT  650

seq1  ATGAGCTCATGGTTTATGTGACAGGAGTGATATTCCTATTGCTCCCCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTCATGGTTTATGTGACAGGAGTGATATTCCTATTGCTCCCCCTC  700

seq1  TCTGCCATTA-TTACCTCCTACTCACTAATTCTATTCACTGTGCTGCACA  749
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCATTATTTACCTCCTACTCACTAATTCTATTCACTGTGCTGCACA  750

seq1  TGCCTTCAAATGAGGGCAGGAAGAAAGCCCTTGTCACCTGTTCCTCCCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCAAATGAGGGCAGGAAGAAAGCCCTTGTCACCTGTTCCTCCCAC  800

seq1  TTGACTGTGGTTGGGATGTTCTATGGGGGTGCCACTTTCATGTATGTGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGTGGTTGGGATGTTCTATGGGGGTGCCACTTTCATGTATGTGCT  850

seq1  GCCCAGTTCCTTCCACAGTCCTAAGCAAGACAATATCATCTCTGTGTTCT  899
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GCCCAGTTCCTTCCACAGTCCTAAGCAAGACAATATCATCTCTGTG-TCT  899

seq1  ATACAATTGTCACACCAGCTCTGAACCCCCTCATTTACAGCCTGAGAAAT  949
      ||   |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTGTCACACCAGCTCTGAACCCCCTCATTTACAGCCTGAGAAAT  949

seq1  AAGGAGGTGATTGGAGCTGTTAGAAGAGTACTGGGGAGACATATTCTGCC  999
       | ||||||| |||||||||||| ||||| ||||||| ||  ||||||||
seq2  -ATGAGGTGA-TGGAGCTGTTAG-AGAGT-CTGGGGAAACTAATTCTGCC  995

seq1  AGCACACGCCACTGTTTAGG-ATGATTCA  1027
      ||||| || ||||||||||| | ||||||
seq2  AGCACCCG-CACTGTTTAGGAAGGATTCA  1023