BAC Information

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BAC

Clone NameB6Ng01-019D18
Chromosome7 (Build37)
Map Location 33,333,036 - 33,334,073
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591
Downstream geneLOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019D18.bB6Ng01-019D18.g
ACCDH852386DH852387
length1,2831,033
definitionDH852386|Mus musculus domesticus DNA, BAC clone: B6Ng01-019D18, 5' end.DH852387|Mus musculus domesticus DNA, BAC clone: B6Ng01-019D18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacacctagtcactgcccatctcgggacatagtaatggggtgatg
ggctagcaatgaatcaggagctgtcacgcaacatcaggtgctgaaacgtc
acactgcgggctatataagcagcaccattttctgggttcggggtcttcct
cctgagaagtaaccaataaagccttttgcgacagaagattccagttgtcc
tgagtgtgttcttgccagtggggaccaaagctcggggaataagtggcgcc
gaagacccgggaagaccattacactggcgcaagggagatccctcgttcat
ggggcagattcagaactgcgggacacgttacagctttaccaggtatgtct
ggccttgaactttctccagcgttagaagccttcctgttccttttcacatg
tcaacaagtggttaaggtagggcagggaattctggactaaattcaaaaca
gtctatcagagttaaagcggggagagagagcaggagcaaagaggaaacac
agtgcaccaattaagcatacaggcctttccatgggtctcgaacctgagga
aaagatcaatcagggaagaatacctggggagagtttggaaggaaggagaa
gaaaaaagagaagcaaaaaaatcaatcagcggatgtttctagaagaagga
gcctatacccgccactagatgagtttaagcggctagctcttagtagctca
gaaccagatgaaggacttagctcctctgaagaaacggacttggaggagga
agcagttcattataagggagaaagttaccagcaagataaaatgcaagcta
ctcagtccagaaaaaggcaaaaaggagctggcaaaagccagcttgctgct
tggcctctggactgtcggcttcaaggtcctagtgcacctctgccctatgt
gcagaggttccattcagaaccttatgagcagagataccgtttagacttgt
tcattccaaaagaggaacagaggaaatgcacaggcatttccaattttgag
ggagctgagggtggtcgtgttcccgctccgtagagttattacagattaag
gagcttgcagaagcagtcgcaactatggagtcagcaattatttcactata
gccaagtcgaaagctgcggaatccacctattgaatccttggtgatgctga
ctgagcaaagctgcagccccagtaatgggaaatattttgaatgaagcttg
tgccgaatctctgacttcaggccaggtccattgaggtcaccaggacatca
tatagcctgatatgtctacaacgtgcatgggca
gaattcatgtgtgcacatcctgaagagggacagctggcagtcagttctat
ttcagtatcatgtcttgcaggttcagagagctaagatgcaggatccagga
ctagagtggcagctgaggacattagcccttttttgtggggtattagtgac
tgtggaagctttagagtttgtgggataggtcttcagcatcaggtttcctg
gacatctgtgggaccaatggaactctggagatgtgataagcaaacctgga
gcaagagtgagttcaaggcattttcaattcccggaaatattgtactgaga
tgagcaggactaggactgcatgtcctagactgcttagaactgggccccca
ccttttccccagcagaggaggtcacatagaccagtagccaggttagacgt
cttttgtttccccttacaaggtcatgttcaacagcaaatgaggcatttcc
agcaccataactccaacaacagatatcgactcaccatggaagtcacattt
catccccaaacatttaatacctgtttttccacccaattaaatgacctgtc
tcaatgaagcatgtcttccaagagtgttctcaacgcactcactgctgctt
gaggattctctcactttcttcctctccttatctcctctctcacacacata
cacacatcagctattcccaccactataggtgaacagagtggaagcagcac
attttcactggcataggagtggagagcagaagataggcttaaaacagtag
cttctgggacagtgccagtgaaggccaaagtccagggctctggagggatc
atcattgtgatttcaggcacagaaaaaaggaatatcttatgtttgtctgg
gagagtccaatgggattagaggcaaagaggggacacaaggccacctgagg
cttttgatgtctatagctaaacagagaaaatgttgtctgctgatatgaca
gatcagttgcataattttcataaggaatgttaagacggagtttggagctt
tgtgaatctgaaaggccctagaaaagtgtgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33333036_33334073
seq2: B6Ng01-019D18.g_66_1098 (reverse)

seq1  CAACACACTTCTCTAGGACATCTCAGATTCAACAAAGCTCCAAACCTCCT  50
      |||||||||| |||||| | | |||||||| ||||||||||||| |||| 
seq2  CAACACACTTTTCTAGGGCCTTTCAGATTC-ACAAAGCTCCAAA-CTCCG  48

seq1  TCTTAACATTCCTTATGAAAAATTATGCAACTGATCTGTCCATATCAGCA  100
      ||||||||||||||||| ||||||||||||||||||||| ||||||||||
seq2  TCTTAACATTCCTTATG-AAAATTATGCAACTGATCTGT-CATATCAGCA  96

seq1  GACAACATTTTCTTCTGTTTAGCTATAGACATCAAAAGCCTCAGGTGGCC  150
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GACAACATTTTC-TCTGTTTAGCTATAGACATCAAAAGCCTCAGGTGGCC  145

seq1  TTGTGTCCCCTCTTTGCCTCTAATCCCATTGGACTCTCCCAGACAAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCCCCTCTTTGCCTCTAATCCCATTGGACTCTCCCAGACAAACAT  195

seq1  AAGATATTCCTTTTTTCTGTGCCTGAAATCACAATGATGATCCCTCCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTCCTTTTTTCTGTGCCTGAAATCACAATGATGATCCCTCCAGA  245

seq1  GCCCTGGACTTTGGCCTTCACTGGCACTGTCCCAGAAGCTACTGTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGACTTTGGCCTTCACTGGCACTGTCCCAGAAGCTACTGTTTTAA  295

seq1  GCCTATCTTCTGCTCTCCACTCCTATGCCAGTGAAAATGTGCTGCTTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATCTTCTGCTCTCCACTCCTATGCCAGTGAAAATGTGCTGCTTCCA  345

seq1  CTCTGTTCACCTATAGTGGTGGGAATAGCTGATGTGTGTATGTGTGTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTCACCTATAGTGGTGGGAATAGCTGATGTGTGTATGTGTGTGAG  395

seq1  AGAGGAGATAAGGAGAGGAAGAAAGTGAGAGAATCCTCAAGCAGCAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGATAAGGAGAGGAAGAAAGTGAGAGAATCCTCAAGCAGCAGTGA  445

seq1  GTGCGTTGAGAACACTCTTGGAAGACATGCTTCATTGAGACAGGTCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGTTGAGAACACTCTTGGAAGACATGCTTCATTGAGACAGGTCATTT  495

seq1  AATTGGGTGGAAAAACAGGTATTAAATGTTTGGGGATGAAATGTGACTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGGTGGAAAAACAGGTATTAAATGTTTGGGGATGAAATGTGACTTC  545

seq1  CATGGTGAGTCGATATCTGTTGTTGGAGTTATGGTGCTGGAAATGCCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGAGTCGATATCTGTTGTTGGAGTTATGGTGCTGGAAATGCCTCA  595

seq1  TTTGCTGTTGAACATGACCTTGTAAGGGGAAACAAAAGACGTCTAACCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGTTGAACATGACCTTGTAAGGGGAAACAAAAGACGTCTAACCTG  645

seq1  GCTACTGGTCTATGTGACCTCCTCTGCTGGGGAAAAGGTGGGGGCCCAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGGTCTATGTGACCTCCTCTGCTGGGGAAAAGGTGGGGGCCCAGT  695

seq1  TCTAAGCAGTCTAGGACATGCAGTCCTAGTCCTGCTCATCTCAGTACAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCAGTCTAGGACATGCAGTCCTAGTCCTGCTCATCTCAGTACAAT  745

seq1  ATTTCCGGGAATTGAAAATGCCTTGAACTCACTCTTGCTCCAGGTTTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCGGGAATTGAAAATGCCTTGAACTCACTCTTGCTCCAGGTTTGCT  795

seq1  TATCACATCTCCAGAGTTCCATTGGTCCCACAGATGTCCAGGAAACCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACATCTCCAGAGTTCCATTGGTCCCACAGATGTCCAGGAAACCTGA  845

seq1  TGCTGAAGACCTATCCCACAAACTCTAAAGCTTCCACAGTCACTAATACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAGACCTATCCCACAAACTCTAAAGCTTCCACAGTCACTAATACC  895

seq1  CCACAAAAAAGGGCTAATGTCCTCAGCTGCCACTCTAGTCCTGGATCCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAAAAGGGCTAATGTCCTCAGCTGCCACTCTAGTCCTGGATCCTG  945

seq1  CATCTTAGCTCTCTGAACCTGCAAGACATGATACTGAAATAGAACTGACT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTAGCTCTCTGAACCTGCAAGACATGATACTGAAATAGAACTGACT  995

seq1  GCCAGCTGTCCCTCTTCAGGATGTGCACACATGAATTC  1038
      ||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCTGTCCCTCTTCAGGATGTGCACACATGAATTC  1033