BAC Information

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BAC

Clone NameB6Ng01-019O19
Chromosome7 (Build37)
Map Location 35,036,890 - 35,173,813
singlet/doubletdoublet
Overlap gene4931406P16Rik, EG619734, Lsm14a
Upstream geneEG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1, LOC668440, Abpz, LOC100043860, LOC627079, LOC635803, Abpg, LOC100043864, LOC100043865, Abpb, Abpa, LOC100043866, LOC100043867, LOC100043868, Wtip, Sae2, LOC100043410, Pdcd2l, Gpi1
Downstream geneLOC668460, LOC668464, Kctd15, Chst8, Pepd, Cebpg, Cebpa, Slc7a10, Wdr88, Gpatch1, Rhpn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019O19.bB6Ng01-019O19.g
ACCDH852870DH852871
length1,055517
definitionDH852870|Mus musculus domesticus DNA, BAC clone: B6Ng01-019O19, 5' end.DH852871|Mus musculus domesticus DNA, BAC clone: B6Ng01-019O19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,036,890 - 35,037,946)(35,173,291 - 35,173,813)
sequence
gaattccacagatgatctcaagtgcaaggtcacagtgaaaattcagagca
ccacaaatactatgtaatactatgcaaaaccagcactggcctagggcaca
gcagtctgaaacacaggtgatcatgtatttacacttcattctcacaatac
ctcatcatacccatgggcaaatactttcaaaacaaaaccaaaacggctgg
aatcggaaatacttctggtctctagcatttcatgtcagacacttgatctt
ggctttccaagagaaaaaacaaaacaaaagaaaacctcaaagcaaaaacc
aatttttatcattacaaaaagcagacagcagagggagcctttgcaagcag
taacagatgccatttcagaaggtacagtaaattacaaaggaaatgaacca
cacaggcagtgagtgttctgtcagttttgttctcagcctgcaggcctcat
gcctttcccacatgcagactgtgttttcccaagtgtggcctctggccacc
tgcaccaggattacctgaggtgcttattaagcatgcagattgccagcatc
ccctgagtgtcagaaatctccatcttcagctggctctcaggggtctgcta
ccttcaaagtttgagaaaccaggctttaaagacttggagctgccaatcac
ctctgacccaaggtagaaaataaactagctttgtagaagctgtttatgat
cacccaattctatataagttatgtctgtttttctcaaaatgagaatccat
ataaggtcaatgttttccaatgagctaggtatgataacatacataggtaa
tcccagttcaagaggtggaggcaaaagaatcaggagttcaaggtcatgtt
tagatacacagtgggcttttaggccaccctatgtttatgtaagactctgt
ctcaacaacaataataaaacttttgaatgagaattaaattaggaattcaa
attgcagagtgctgcccagatgcctgggttttgtccccagcatcctgtaa
acctgagcttggccaatgcatacctataatcccaacaccttagaggtgga
agcag
ttatgcaaccgaagggtgcgcgttaaaatgcttgcttgctgtccccatgg
gccaattttctggaaccctggtagaaaggaaagtttaagttttgatgatc
cgggactcttgtacacacttcagagcgagtactatcggggcgctgaccga
ctccgctgtacttggggagaggaagttgtgtggaaggggatcccccccta
cttaccccaaccccatagtctgtacagtcgatacagtcaatttgtgggtt
ttgtttccgttcacgcgtgctagtgacaggaaggcacaaagaaaataaac
ttgagtttctgatcctaggggaagtcttataacagtttctgataccaggg
aggtctattttcctaccacacctagtagaattgttaagaactaagtatgc
taggaaaaaaggtcctagggatagcaagattctaaatctaaaagcatttt
ttatagatgcttcttttaacagtttcagtttcttgaattatacctaatag
ggggtaggggtgtggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_35036890_35037946
seq2: B6Ng01-019O19.b_48_1102

seq1  GAATTCCACAGATGATCTCAAGTGCAAGGTCACAGTGAAAATTCAGAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGATGATCTCAAGTGCAAGGTCACAGTGAAAATTCAGAGCA  50

seq1  CCACAAATACTATGTAATACTATGCAAAACCAGCACTGGCCTAGGGCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAATACTATGTAATACTATGCAAAACCAGCACTGGCCTAGGGCACA  100

seq1  GCAGTCTGAAACACAGGTGATCATGTATTTACACTTCATTCTCACAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCTGAAACACAGGTGATCATGTATTTACACTTCATTCTCACAATAC  150

seq1  CTCATCATACCCATGGGCAAATACTTTCAAAACAAAACCAAAACGGCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCATACCCATGGGCAAATACTTTCAAAACAAAACCAAAACGGCTGG  200

seq1  AATCGGAAATACTTCTGGTCTCTAGCATTTCATGTCAGACACTTGATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGGAAATACTTCTGGTCTCTAGCATTTCATGTCAGACACTTGATCTT  250

seq1  GGCTTTCCAAGAGAAAAAACAAAACAAAAGAAAACCTCAAAGCAAAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTCCAAGAGAAAAAACAAAACAAAAGAAAACCTCAAAGCAAAAACC  300

seq1  AATTTTTATCATTACAAAAAGCAGACAGCAGAGGGAGCCTTTGCAAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTATCATTACAAAAAGCAGACAGCAGAGGGAGCCTTTGCAAGCAG  350

seq1  TAACAGATGCCATTTCAGAAGGTACAGTAAATTACAAAGGAAATGAACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGATGCCATTTCAGAAGGTACAGTAAATTACAAAGGAAATGAACCA  400

seq1  CACAGGCAGTGAGTGTTCTGTCAGTTTTGTTCTCAGCCTGCAGGCCTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCAGTGAGTGTTCTGTCAGTTTTGTTCTCAGCCTGCAGGCCTCAT  450

seq1  GCCTTTCCCACATGCAGACTGTGTTTTCCCAAGTGTGGCCTCTGGCCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCCCACATGCAGACTGTGTTTTCCCAAGTGTGGCCTCTGGCCACC  500

seq1  TGCACCAGGATTACCTGAGGTGCTTATTAAGCATGCAGATTGCCAGCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCAGGATTACCTGAGGTGCTTATTAAGCATGCAGATTGCCAGCATC  550

seq1  CCCTGAGTGTCAGAAATCTCCATCTTCAGCTGGCTCTCAGGGGTCTGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGTGTCAGAAATCTCCATCTTCAGCTGGCTCTCAGGGGTCTGCTA  600

seq1  CCTTCAAAGTTTGAGAAACCAGGCTTTAAAGACTTGGAGCTGCCAATCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAAAGTTTGAGAAACCAGGCTTTAAAGACTTGGAGCTGCCAATCAC  650

seq1  CTCTGACCCAAGGTAGAAAATAAACTAGCTTTGTAGAAGCTGTTTATGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACCCAAGGTAGAAAATAAACTAGCTTTGTAGAAGCTGTTTATGAT  700

seq1  CACCCAATTCTATATAAGTTATGTCTGTTTTTCTCAAAATGAGAATCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAATTCTATATAAGTTATGTCTGTTTTTCTCAAAATGAGAATCCAT  750

seq1  ATAAGGTCAATGTTTTCCAATGAGCTAGGTATGATAACATACATAGGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTCAATGTTTTCCAATGAGCTAGGTATGATAACATACATAGGTAA  800

seq1  TCCCAGTTCAAGAGGTGGAGGCAAAAGAATCAGGAGTTCAAGGTCATGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTTCAAGAGGTGGAGGCAAAAGAATCAGGAGTTCAAGGTCATGTT  850

seq1  TAGATACACAGTGGGCTTTTAGGCCACCCTATGTTTATGTAAGACTCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATACACAGTGGGCTTTTAGGCCACCCTATGTTTATGTAAGACTCTGT  900

seq1  CTCAACAACAATAATAAAAACTTTTGAATGAGAATTAAATTAGGAATTCA  950
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTCAACAACAATAAT-AAAACTTTTGAATGAGAATTAAATTAGGAATTCA  949

seq1  AATTGCAGAGTGCTGGCCCAGAATGCCTGGGTTTGGTCCCCAGCATCCTG  1000
      |||||||||||||| |||||| |||||||||||| |||||||||||||||
seq2  AATTGCAGAGTGCT-GCCCAG-ATGCCTGGGTTTTGTCCCCAGCATCCTG  997

seq1  TAAAACTGAGCTTGG-CAATGCATACCTATAATCCCAACACTTAGGAGGT  1049
      |||| |||||||||| ||||||||||||||||||||||||| |  |||||
seq2  TAAACCTGAGCTTGGCCAATGCATACCTATAATCCCAACACCTTAGAGGT  1047

seq1  GGAAGCAG  1057
      ||||||||
seq2  GGAAGCAG  1055

seq1: chr7_35173291_35173813
seq2: B6Ng01-019O19.g_67_589 (reverse)

seq1  AGCCACACCCCTACCCCCTATTAGGTATAATTCAAGAAACTGAAACTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACACCCCTACCCCCTATTAGGTATAATTCAAGAAACTGAAACTGTT  50

seq1  AAAAGAAGCATCTATAAAAAATGCTTTTAGATTTAGAATCTTGCTATCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAGCATCTATAAAAAATGCTTTTAGATTTAGAATCTTGCTATCCC  100

seq1  TAGGACCTTTTTTCCTAGCATACTTAGTTCTTAACAATTCTACTAGGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACCTTTTTTCCTAGCATACTTAGTTCTTAACAATTCTACTAGGTGT  150

seq1  GGTAGGAAAATAGACCTCCCTGGTATCAGAAACTGTTATAAGACTTCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGAAAATAGACCTCCCTGGTATCAGAAACTGTTATAAGACTTCCCC  200

seq1  TAGGATCAGAAACTCAAGTTTATTTTCTTTGTGCCTTCCTGTCACTAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATCAGAAACTCAAGTTTATTTTCTTTGTGCCTTCCTGTCACTAGCA  250

seq1  CGCGTGAACGGAAACAAAACCCACAAATTGACTGTATCGACTGTACAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGTGAACGGAAACAAAACCCACAAATTGACTGTATCGACTGTACAGAC  300

seq1  TATGGGGTTGGGGTAAGTAGGGGGGGATCCCCTTCCACACAACTTCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGGTTGGGGTAAGTAGGGGGGGATCCCCTTCCACACAACTTCCTCT  350

seq1  CCCCAAGTACAGCGGAGTCGGTCAGCGCCCCGATAGTACTCGCTCTGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGTACAGCGGAGTCGGTCAGCGCCCCGATAGTACTCGCTCTGAAG  400

seq1  TGTGTACAAGAGTCCCGGATCATCAAAACTTAAACTTTCCTTTCTACCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACAAGAGTCCCGGATCATCAAAACTTAAACTTTCCTTTCTACCAG  450

seq1  GGTTCCAGAAAATTGGCCCATGGGGACAGCAAGCAAGCATTTTAACGCGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCAGAAAATTGGCCCATGGGGACAGCAAGCAAGCATTTTAACGCGC  500

seq1  ACCCTTCGGTTGCATAAGAATTC  523
      |||||||||||||||||||||||
seq2  ACCCTTCGGTTGCATAAGAATTC  523