BAC Information

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BAC

Clone NameB6Ng01-021D22
Chromosome7 (Build37)
Map Location 124,221,372 - 124,319,281
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043313, 1110004F10Rik, Plekha7, Rps13, Pik3c2a, LOC100042798, Nucb2, LOC100043320, EG668484, LOC668485, LOC546993, LOC100043330
Downstream geneXylt1, LOC669758, Rps15a, Arl6ip1, 2610207I05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021D22.bB6Ng01-021D22.g
ACCDH853804DH853805
length1,2171,073
definitionDH853804|Mus musculus domesticus DNA, BAC clone: B6Ng01-021D22, 5' end.DH853805|Mus musculus domesticus DNA, BAC clone: B6Ng01-021D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,221,372 - 124,222,595)(124,318,185 - 124,319,281)
sequence
gaattcacagcaaagatacatatataggagaaaaaacgcagtgggtgtct
ttctagatctggttcacttcactcaatgtagtattataaccatttttcct
tcaaatttcatatcttcctctacagctgagctaaattctattgtatacat
gtactactttattataatcctttcatcagctggtgtatagctagctagcc
tgctctcatttccaggttattgtgaacacagcatcaatgaatacgcatag
tcaggtatctctgtagttgaatataatcccctttgggtatatctccagta
gtgctacattttgccataagacagttgtatttttagcttctgaggacatt
ccacactgatttccataatagctccaccagtttacaccctaccaacagta
cacaaggattcagctttcctcatatccttcttgccttgctcacattttca
gaagttgagtccatggcccattggccccaggaacttcagcagcacacatg
acaagggaagctcattttaaagtgacatattcttaaagtggtatgatcct
aagtaatgagacagtcacggagaatgctaaagaaggccttttagaagtgt
tgtgtgactcttcctgcagagatggaaacaaacttctacttatcccagat
aaaacaccaagaaaacaaagaaattgtctcacttggtgaaccagtgactt
tattagtttattaatgctgcttacaggaatatgagtgactcaatggcagc
tgaatcttctaagtccactccagaatgagtgacaactcacaaaagcagtt
cttaagctacatcacttacaggtggcttggctttgtcagagaatcctctc
accctggaaaaatgctttgaggatcgtgtacagttcttcatcttcttaag
ctgtatatgtttgtcagcctattcctccctccaggagagattgtttaaaa
tagatggaattgtacatgatattcttgtccccttttggcttgcatctctc
tatccctcttctgcaacattcccagaagtcttagaaggaattgtcctaat
tattttcttgtatttaagtaaaattaagccctatgcttacacaatcattt
cctcttagaaatttaaccaggtattgagtctactttcaagaggtaactgc
ctaacaaataaaatgtttggcaggcttcctttcagtttccaagagagaag
actaatatgccaagggg
gaattcatatctaaggaactgctatagtctacatcctggtccagctagaa
tagtaatcaccttaggtaataggaggtctacaggaagacaagtatttcta
gagtattctctagagtagaggtgctagaagagacaaaagattgatcttcc
aaagtctatccacacaaatcaattgtaatggaatcacagccattacaatg
aatagctctgatccacagagtgtatactgtgtgtcaagacaagtgattta
ttgatatcctcttatttcattttctcaatgagcctagtaggtactgaaac
tatgattatcctctatctaagatatgaaaacaggctgaggatggttaagt
cattgacttaggatctcgtagattataacatctgaattctattagagaat
gagcacccctctcgccccaccccctccttccctgtggtattctctctctc
ttgagggttctgagtaggaagttcaagagaaagctgaaataacttcctct
cccaacttccagccactcccagagtaggctaaaaagcagcatgggaacag
atggctgttgggtggtgtataaattcccttcaaatgtatatcctgaatat
acaaaaacaaattagcgtgattggaaagtcagcatgcttttaaaaagaaa
tagagaggttctttggcttccaagatcttttatcattgtgtactggggac
catatggatgccatcagtttgcctagggatggcaagagaaaggaagggaa
gaacacacaaaaccttgaggaaacagtgagtgtgtatcgatgttgagaat
aggagtccggcgctactcttggcaccggattgcctgagtgggctgttggg
actatttttgtagcagctctttgacaatgtcattcacacgctgcacagtt
ttcacatataaaatttatagttcagtgtgttgtacttttttcagacatgt
gcactctaatcacagacatttagacgtttcctgacatcaaaataagccct
gtatcttatcactgcattcctccctatggaccacaattgtctgctacatg
gattcatcaaaatgggaattttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_124221372_124222595
seq2: B6Ng01-021D22.b_43_1259

seq1  GAATTCACAGCAAAGATACATATATAGGAGAAAAAACGCAGTGGGTGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCAAAGATACATATATAGGAGAAAAAACGCAGTGGGTGTCT  50

seq1  TTCTAGATCTGGTTCACTTCACTCAATGTAGTATTATAACCATTTTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGATCTGGTTCACTTCACTCAATGTAGTATTATAACCATTTTTCCT  100

seq1  TCAAATTTCATATCTTCCTCTACAGCTGAGCTAAATTCTATTGTATACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTCATATCTTCCTCTACAGCTGAGCTAAATTCTATTGTATACAT  150

seq1  GTACTACTTTATTATAATCCTTTCATCAGCTGGTGTATAGCTAGCTAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTACTTTATTATAATCCTTTCATCAGCTGGTGTATAGCTAGCTAGCC  200

seq1  TGCTCTCATTTCCAGGTTATTGTGAACACAGCATCAATGAATACGCATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCATTTCCAGGTTATTGTGAACACAGCATCAATGAATACGCATAG  250

seq1  TCAGGTATCTCTGTAGTTGAATATAATCCCCTTTGGGTATATCTCCAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTATCTCTGTAGTTGAATATAATCCCCTTTGGGTATATCTCCAGTA  300

seq1  GTGCTACATTTTGCCATAAGACAGTTGTATTTTTAGCTTCTGAGGACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTACATTTTGCCATAAGACAGTTGTATTTTTAGCTTCTGAGGACATT  350

seq1  CCACACTGATTTCCATAATAGCTCCACCAGTTTACACCCTACCAACAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTGATTTCCATAATAGCTCCACCAGTTTACACCCTACCAACAGTA  400

seq1  CACAAGGATTCAGCTTTCCTCATATCCTTCTTGCCTTGCTCACATTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGGATTCAGCTTTCCTCATATCCTTCTTGCCTTGCTCACATTTTCA  450

seq1  GAAGTTGAGTCCATGGCCCATTGGCCCCAGGAACTTCAGCAGCACACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGAGTCCATGGCCCATTGGCCCCAGGAACTTCAGCAGCACACATG  500

seq1  ACAAGGGAAGCTCATTTTAAAGTGACATATTCTTAAAGTGGTATGATCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGAAGCTCATTTTAAAGTGACATATTCTTAAAGTGGTATGATCCT  550

seq1  AAGTAATGAGACAGTCACGGAGAATGCTAAAGAAGGCCTTTTAGAAGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATGAGACAGTCACGGAGAATGCTAAAGAAGGCCTTTTAGAAGTGT  600

seq1  TGTGTGACTCTTCCTGCAGAGATGGAAACAAACTTCTACTTATCCCAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGACTCTTCCTGCAGAGATGGAAACAAACTTCTACTTATCCCAGAT  650

seq1  AAAACACCAAGAAAACAAAGAAATTGTCTCACTTGGTGAACCAGTGACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACCAAGAAAACAAAGAAATTGTCTCACTTGGTGAACCAGTGACTT  700

seq1  TATTAGTTTATTAATGCTGCTTACAGGAATATGAGTGACTCAATGGCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTTTATTAATGCTGCTTACAGGAATATGAGTGACTCAATGGCAGC  750

seq1  TGAATCTTCTAAGTCCACTCCAGAATGAGTGACAACTCACAAAAGCAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTTCTAAGTCCACTCCAGAATGAGTGACAACTCACAAAAGCAGTT  800

seq1  CTTAAGCTACATCACTTACAGGTGGCTTGGC-TTGTCAGAGAATCCTCTC  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTTAAGCTACATCACTTACAGGTGGCTTGGCTTTGTCAGAGAATCCTCTC  850

seq1  ACCCTGGAAAAATGCTTTGAGGATCGTGTACAGTTCTTCATCTTCTTAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGGAAAAATGCTTTGAGGATCGTGTACAGTTCTTCATCTTCTTAAG  900

seq1  CTGTATATGTTTTGTCAGCCTATTCCTCCCTCCAGGAGAGATTGTTTAAA  949
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATATG-TTTGTCAGCCTATTCCTCCCTCCAGGAGAGATTGTTTAAA  949

seq1  ATTAGATGGAATTGCTACATGATATTC-TGTCCCCTCTTTGGCTTGCATT  998
      | |||||||||||| |||||||||||| |||||||| ||||||||||| |
seq2  A-TAGATGGAATTG-TACATGATATTCTTGTCCCCT-TTTGGCTTGCA-T  995

seq1  CTCTCTATCCCTCTTCTGCAACATTCCCAG-AGTCTTAG-AGGAAATGT-  1045
      |||||||||||||||||||||||||||||| |||||||| ||||| ||| 
seq2  CTCTCTATCCCTCTTCTGCAACATTCCCAGAAGTCTTAGAAGGAATTGTC  1045

seq1  CTAATTATTTTCTTGTATTTATAGGTAAACATTAGACCTATGCTACAACA  1095
      |||||||||||||||||||  || |||||  | || ||||||||   |||
seq2  CTAATTATTTTCTTGTATT--TAAGTAAAATTAAGCCCTATGCTTACACA  1093

seq1  ATCATTTCTTCTTAGAAATTAAACCAGGTA-TGAGTC-ACTTTCATGGAG  1143
      |||||||| ||||||||||| ||||||||| |||||| ||||||| |   
seq2  ATCATTTCCTCTTAGAAATTTAACCAGGTATTGAGTCTACTTTCAAG--A  1141

seq1  GGTAACTTGCTAACAAAATAAATGTTTTGGCAGGGCTTCCTTTCAGGTGT  1193
      |||||||  ||||||||  ||||| ||||||| |||||||||||| || |
seq2  GGTAACTGCCTAACAAATAAAATG-TTTGGCA-GGCTTCCTTTCA-GTTT  1188

seq1  CCAAGAGGGAGAGGACTTAATTGCCAAGGGG  1224
      ||||||  |||| |||| |  ||||||||||
seq2  CCAAGA--GAGAAGACTAATATGCCAAGGGG  1217

seq1: chr7_124318185_124319281
seq2: B6Ng01-021D22.g_68_1140 (reverse)

seq1  AAAAAATCCCATTTTATGATGAAATCCATGTAGACAGACCATAATTTGTT  50
      ||||| ||||||||  ||||| ||||||||||| |||||    | |||| 
seq2  AAAAATTCCCATTT--TGATG-AATCCATGTAG-CAGAC----AATTGT-  41

seq1  GGTTCCATAGGGAAGGGAAATGGCAGGTGATAGGATACAGGGCTTAATTT  100
       | ||||||||||  ||||   ||| |||||| |||||||||||| ||||
seq2  -GGTCCATAGGGA--GGAA--TGCA-GTGATAAGATACAGGGCTT-ATTT  84

seq1  TGATGTCAGGAAACGTTCTAAAATTGTCTGTGGTTAGAGTTGCACATGTC  150
      ||||||||||||||| ||||||  |||||||| |||||| ||||||||||
seq2  TGATGTCAGGAAACG-TCTAAA--TGTCTGTGATTAGAG-TGCACATGTC  130

seq1  TGAAAGAAAGTACAAACAACACTGAACTATAAATTTTATATGTGAAAACT  200
      ||||| |||||||||   ||||||||||||||||||||||||||||||||
seq2  TGAAA-AAAGTACAA--CACACTGAACTATAAATTTTATATGTGAAAACT  177

seq1  GTGCAGCGTGTGAATGACATTGTCAAAGAGCTGCTACAAAAATAAGTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTGCAGCGTGTGAATGACATTGTCAAAGAGCTGCTACAAAAAT-AGTCCC  226

seq1  AACAGCCCACTCAGGCAATCCGGTGCCAAGAGTAGCGCCGGACTCCTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCCACTCAGGCAATCCGGTGCCAAGAGTAGCGCCGGACTCCTATT  276

seq1  CTCAACATCGATACACACTCACTGTTTCCTCAAGGTTTTGTGTGTTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACATCGATACACACTCACTGTTTCCTCAAGGTTTTGTGTGTTCTTC  326

seq1  CCTTCCTTTCTCTTGCCATCCCTAGGCAAACTGATGGCATCCATATGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTTCTCTTGCCATCCCTAGGCAAACTGATGGCATCCATATGGTC  376

seq1  CCCAGTACACAATGATAAAAGATCTTGGAAGCCAAAGAACCTCTCTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTACACAATGATAAAAGATCTTGGAAGCCAAAGAACCTCTCTATTT  426

seq1  CTTTTTAAAAGCATGCTGACTTTCCAATCACGCTAATTTGTTTTTGTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAAAGCATGCTGACTTTCCAATCACGCTAATTTGTTTTTGTATA  476

seq1  TTCAGGATATACATTTGAAGGGAATTTATACACCACCCAACAGCCATCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGATATACATTTGAAGGGAATTTATACACCACCCAACAGCCATCTG  526

seq1  TTCCCATGCTGCTTTTTAGCCTACTCTGGGAGTGGCTGGAAGTTGGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATGCTGCTTTTTAGCCTACTCTGGGAGTGGCTGGAAGTTGGGAGA  576

seq1  GGAAGTTATTTCAGCTTTCTCTTGAACTTCCTACTCAGAACCCTCAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTATTTCAGCTTTCTCTTGAACTTCCTACTCAGAACCCTCAAGAG  626

seq1  AGAGAGAATACCACAGGGAAGGAGGGGGTGGGGCGAGAGGGGTGCTCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAATACCACAGGGAAGGAGGGGGTGGGGCGAGAGGGGTGCTCATT  676

seq1  CTCTAATAGAATTCAGATGTTATAATCTACGAGATCCTAAGTCAATGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATAGAATTCAGATGTTATAATCTACGAGATCCTAAGTCAATGACT  726

seq1  TAACCATCCTCAGCCTGTTTTCATATCTTAGATAGAGGATAATCATAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCATCCTCAGCCTGTTTTCATATCTTAGATAGAGGATAATCATAGTT  776

seq1  TCAGTACCTACTAGGCTCATTGAGAAAATGAAATAAGAGGATATCAATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACCTACTAGGCTCATTGAGAAAATGAAATAAGAGGATATCAATAA  826

seq1  ATCACTTGTCTTGACACACAGTATACACTCTGTGGATCAGAGCTATTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTGTCTTGACACACAGTATACACTCTGTGGATCAGAGCTATTCAT  876

seq1  TGTAATGGCTGTGATTCCATTACAATTGATTTGTGTGGATAGACTTTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGGCTGTGATTCCATTACAATTGATTTGTGTGGATAGACTTTGGA  926

seq1  AGATCAATCTTTTGTCTCTTCTAGCACCTCTACTCTAGAGAATACTCTAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAATCTTTTGTCTCTTCTAGCACCTCTACTCTAGAGAATACTCTAG  976

seq1  AAATACTTGTCTTCCTGTAGACCTCCTATTACCTAAGGTGATTACTATTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTTGTCTTCCTGTAGACCTCCTATTACCTAAGGTGATTACTATTC  1026

seq1  TAGCTGGACCAGGATGTAGACTATAGCAGTTCCTTAGATATGAATTC  1097
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGGACCAGGATGTAGACTATAGCAGTTCCTTAGATATGAATTC  1073