BAC Information

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BAC

Clone NameB6Ng01-021L15
Chromosome7 (Build37)
Map Location 4,921,565 - 4,922,267
singlet/doubletsinglet
Overlap geneGm1078
Upstream geneLOC664841, Lair1, Ttyh1, Leng8, Leng9, Cdc42ep5, LOC384521, EG232801, Ncr1, Gp6, LOC100041851, Atp6v0c-ps1, Rdh13, Eps8l1, Ppp1r12c, Tnnt1, Tnni3, 6030429G01Rik, Syt5, Ptprh, LOC669557, Tmem86b, Saps1, EG628211, 1500019G21Rik, Brsk1, BC022651, Suv420h2, Cox6b2, 4930401F20Rik, Il11, 4930572D21Rik, 2210411K11Rik, Rpl28, Ube2s, D430041B17Rik, Isoc2b, Isoc2a, LOC384524, Zfp628, Nat14, A430110N23Rik, LOC665049, Gm1079
Downstream geneZfp579, Fiz1, Zfp524, 6430526N21Rik, 4632433K11Rik, Zfp784, Zfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150, Nlrp2, EG272350, V1rd4, EG665163, V1rd10, EG630071, EG665255, EG636697, EG636705, LOC636731, LOC673215, V1rd2, LOC100041627, LOC100041637, V1rd1, LOC100041647, V1rd11, LOC100041666
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021L15.bB6Ng01-021L15.g
ACCDH854151DH854152
length703812
definitionDH854151|Mus musculus domesticus DNA, BAC clone: B6Ng01-021L15, 5' end.DH854152|Mus musculus domesticus DNA, BAC clone: B6Ng01-021L15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcaggaacgttgttctcaggactgagtcccttcggaggagct
taagggccacagtttgacctgtcgggaagatggtgtcagataagaacctg
ggacatcatggtcctgctatgggaccttagggaagccacttgacctctct
gagcctgagaattttcatgaaagtcaagtttctccatctgtgaagtgtgg
attgaaacagatctttccttatttgctctgctattctatattagcctgct
gtgctgccttgtataactgacttaccctctctggtcttccatttcctata
agataaagggacatgatagtgacatgaattccagttcaaattgttctctt
gccttgctgtgtgatgtgagacttggagtctgccataacctctctggggg
acctatatctctcagaagatcacagagttctacattttcagagttcccac
caggtctggcttatctctgagatgtctcatgctgagagaatttgaagtcc
accccttggtggctgaactcacctccttggcgtggctgggctaggagcac
gcggccataggagccggaacctagctttcggatgagacggtactgtacac
acaggcttcttactgatgtcactcggctggctgttagctccactagccgc
tgcagggccatggccgtgtcctcctgtggggagaaggagttgggtggttg
agg
gaattcaagacgttagactccagaaaaccacataacccaattttaaaaat
gggctacagagacaaagaattcccaggtgaggaatcatgaatggcctaga
agcacctaaagaaatgctcaacatccttagtcatcagggaaatgcaaatc
aaagcaaccctgagattccacctcacatcaataagaatggctaagatcaa
aaactcaggcaacagcagatgctggtgagaatgtagagaaggaggaatac
tcctccattgctggtgggattgcaagctgatgcaaccactttggaaatca
gtttggtggtttctcagaaaattggaaatatttctatctgaagacctaac
tataccactcctgggcatatacccaaaagatgctccaacatataacaagg
acatatgctccactatgttcattgcagccttatttataatatccagaagc
tggaaacaacccagatgtccctcaatagaagaatgaatacagaaaatgtg
gtacatttacacaatggaatactactcagcttttaaaatgacgactttac
aaattttgcaggcaaatggatggaactagaagatatcatcctgagtgggg
taaccctgactcaagaggatacacatgatgtgtactcactgttaagtgga
tattagtccaaaagctcagaatacccacgatacaactcacagaccataac
aaaaaggaagatcaaagtgtggatgtttcaatcctacttagaagaggcaa
aaaataatcactggaggcagagggagtgaggaacctgaatgggagagggg
aaggagaggtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_4921565_4922267
seq2: B6Ng01-021L15.b_44_746

seq1  GAATTCTCTCAGGAACGTTGTTCTCAGGACTGAGTCCCTTCGGAGGAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCAGGAACGTTGTTCTCAGGACTGAGTCCCTTCGGAGGAGCT  50

seq1  TAAGGGCCACAGTTTGACCTGTCGGGAAGATGGTGTCAGATAAGAACCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGCCACAGTTTGACCTGTCGGGAAGATGGTGTCAGATAAGAACCTG  100

seq1  GGACATCATGGTCCTGCTATGGGACCTTAGGGAAGCCACTTGACCTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCATGGTCCTGCTATGGGACCTTAGGGAAGCCACTTGACCTCTCT  150

seq1  GAGCCTGAGAATTTTCATGAAAGTCAAGTTTCTCCATCTGTGAAGTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGAGAATTTTCATGAAAGTCAAGTTTCTCCATCTGTGAAGTGTGG  200

seq1  ATTGAAACAGATCTTTCCTTATTTGCTCTGCTATTCTATATTAGCCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAACAGATCTTTCCTTATTTGCTCTGCTATTCTATATTAGCCTGCT  250

seq1  GTGCTGCCTTGTATAACTGACTTACCCTCTCTGGTCTTCCATTTCCTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGCCTTGTATAACTGACTTACCCTCTCTGGTCTTCCATTTCCTATA  300

seq1  AGATAAAGGGACATGATAGTGACATGAATTCCAGTTCAAATTGTTCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGGGACATGATAGTGACATGAATTCCAGTTCAAATTGTTCTCTT  350

seq1  GCCTTGCTGTGTGATGTGAGACTTGGAGTCTGCCATAACCTCTCTGGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCTGTGTGATGTGAGACTTGGAGTCTGCCATAACCTCTCTGGGGG  400

seq1  ACCTATATCTCTCAGAAGATCACAGAGTTCTACATTTTCAGAGTTCCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATATCTCTCAGAAGATCACAGAGTTCTACATTTTCAGAGTTCCCAC  450

seq1  CAGGTCTGGCTTATCTCTGAGATGTCTCATGCTGAGAGAATTTGAAGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTGGCTTATCTCTGAGATGTCTCATGCTGAGAGAATTTGAAGTCC  500

seq1  ACCCCTTGGTGGCTGAACTCACCTCCTTGGCGTGGCTGGGCTAGGAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTGGTGGCTGAACTCACCTCCTTGGCGTGGCTGGGCTAGGAGCAC  550

seq1  GCGGCCATAGGAGCCGGAACCTAGCTTTCGGATGAGACGGTACTGTACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCCATAGGAGCCGGAACCTAGCTTTCGGATGAGACGGTACTGTACAC  600

seq1  ACAGGCTTCTTACTGATGTCACTCGGCTGGCTGTTAGCTCCACTAGCCGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTTCTTACTGATGTCACTCGGCTGGCTGTTAGCTCCACTAGCCGC  650

seq1  TGCAGGGCCATGGCCGTGTCCTCCTGTGGGGAGAAGGAGTTGGGTGGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGCCATGGCCGTGTCCTCCTGTGGGGAGAAGGAGTTGGGTGGTTG  700

seq1  AGG  703
      |||
seq2  AGG  703