BAC Information

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BAC

Clone NameB6Ng01-022B14
Chromosome7 (Build37)
Map Location 7,704,639 - 7,823,241
singlet/doubletdoublet
Overlap geneEG625353, Vmn2r-ps40
Upstream geneUsp29, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485
Downstream geneVmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022B14.bB6Ng01-022B14.g
ACCDH854412DH854413
length1,014940
definitionDH854412|Mus musculus domesticus DNA, BAC clone: B6Ng01-022B14, 5' end.DH854413|Mus musculus domesticus DNA, BAC clone: B6Ng01-022B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,822,225 - 7,823,241)(7,704,639 - 7,705,306)
sequence
gaattccgttatgcatctccaaatttcttttagcgtggggatgcacaata
gaaaagttattggtgatgacgtcatatctgatgtgtataactgagaagag
tttgaattcttgagatcagtggtgaaagaatacttgatttcaaatatgtc
ctttctttcttcctctatggtaatttcccaagctttctttgcaagaggac
ctgtcaagtatcattcacacaaaggcctaaaaccagttgggtcttaaatc
caaggcaaaaattttgaactaaggtgtccattaacatatcaaactggaca
gtggcctccagtttctctcagcatccctctgtctctactgcatataggtc
cctcctggctggcatgcctccccaaactagccccaaatttctagaccagg
tgatcccctggactttccttcttccagatcttctgacacctatataactc
agccacttataaccatgttagtctcttcactcaggctgcccctcttggtt
ggtggcccctctttctcttttcagatcgcctatcctcacatggcccagct
tagggtcatgttcactctgtaactctcgcagaggtttcctgtctggtctg
gaactcactgtgacaggccagtttctaatcccagacattaacttgcctct
gctagcagttctgtaatttaggagtgtttcagcaagcccggcctttgtag
ctcaaggaaatactggcacatctataatcacaacactctccctaacagat
tgagtgtacagctccatcttgggaggtgtgtctacttcctggcacttcat
catgtctgaactacattgtacagaagacattgcactgagaatagccagag
aaactaggcattttggtgaagacaaataatgggaccttgacaataaaatt
tctaaagcagatctaactaagctttcctttgaaatcagatttggatcaat
gtgtgaattgtgtgcagaggttctttgaaactttttggattctgtcagtc
cagaaaactagttt
gaattcactgcctatgtagaccagaagaaggaagcagatacactggaata
gcagttactgagaattgtgtttcccaattagtgtttttattaaggaaaga
tcctcttcgagagaaagaagtattagactgttgtgccatcattacagccc
ctttctttctttttccttttaattattttttatttacattccagccaata
gacatcttcctcattcttcttcccacaatccctcatcccaatcctcctcc
ctcttgcctctgatagagtgctccctgacatcctactctgaccctaaata
agtcatcgcttttctctggaacctcaagtatgtcaaagactagacatcac
ttctcttattgagggcagaccagaccgtgttctgctatatatgtgcctgg
ggcccatgtccatgtatggtgcctggttggtatctgagtttggggttttc
ccagaggaccgagttagtttagactgctggtcttcctatgggtagtccct
tctcttcagctccttaaatccttcccctgggtcaaacatagggatccttc
tcttcagtccagttgggtataagtatctgcatgtgtcttagtcagctgct
ggtagggtctctcagaggacatcaatgataggcttttctttttaaagaaa
ccatagtcagtaaaagtgtgaggccttagttcttccacccaatccccatg
agactgtttacaagttggccagtcagtggaccacctttcctacagtctct
tctccatttttccctgcaattatcttggacaagaaatttcctgagtcaga
aactttgactctgtgttcataacgctgtccctccaaatagaggcagtgtt
tatctcctggaaatggtctctttgagttccctttcccactttgtgcaagt
gtttatgattacctccattgagtcttgagagtctcttact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7822225_7823241
seq2: B6Ng01-022B14.b_44_1057 (reverse)

seq1  AAACTAGTTTTCTGTGACTGACAG-ATCCAAAAAGTTTCAAAGAACCTTC  49
      |||||||||||||| ||||||||| |||||||||||||||||||||| ||
seq2  AAACTAGTTTTCTG-GACTGACAGAATCCAAAAAGTTTCAAAGAACC-TC  48

seq1  TGCACACAATTCACACATTGATCCAAATCTGATTTCCAAAGGAAAGCTTA  99
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGCACACAATTCACACATTGATCCAAATCTGATTT-CAAAGGAAAGCTTA  97

seq1  GTTAGATCTGCTTTAGAAATTTTATTGTCAAGGTCCCATTATTTTGTCTT  149
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTTAGATCTGCTTTAGAAATTTTATTGTCAAGGTCCCATTA-TTTGTCTT  146

seq1  CACCAAAATGCCTAGTTTCTCTGGCTATTCTCAGTGCAATGTCTTCTGTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAAATGCCTAGTTTCTCTGGCTATTCTCAGTGCAATGTCTTCTGTA  196

seq1  CAATGTAGTTCAGACATGATGAAGTGCCAGGAAGTAGACACACCTCCCAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTAGTTCAGACATGATGAAGTGCCAGGAAGTAGACACACCTCCCAA  246

seq1  GATGGAGCTGTACACTCAATCTGTTAGGGAGAGTGTTGTGATTATAGATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGCTGTACACTCAATCTGTTAGGGAGAGTGTTGTGATTATAGATG  296

seq1  TGCCAGTATTTCCTTGAGCTACAAAGGCCGGGCTTGCTGAAACACTCCTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTATTTCCTTGAGCTACAAAGGCCGGGCTTGCTGAAACACTCCTA  346

seq1  AATTACAGAACTGCTAGCAGAGGCAAGTTAATGTCTGGGATTAGAAACTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAGAACTGCTAGCAGAGGCAAGTTAATGTCTGGGATTAGAAACTG  396

seq1  GCCTGTCACAGTGAGTTCCAGACCAGACAGGAAACCTCTGCGAGAGTTAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCACAGTGAGTTCCAGACCAGACAGGAAACCTCTGCGAGAGTTAC  446

seq1  AGAGTGAACATGACCCTAAGCTGGGCCATGTGAGGATAGGCGATCTGAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAACATGACCCTAAGCTGGGCCATGTGAGGATAGGCGATCTGAAA  496

seq1  AGAGAAAGAGGGGCCACCAACCAAGAGGGGCAGCCTGAGTGAAGAGACTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGAGGGGCCACCAACCAAGAGGGGCAGCCTGAGTGAAGAGACTA  546

seq1  ACATGGTTATAAGTGGCTGAGTTATATAGGTGTCAGAAGATCTGGAAGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTTATAAGTGGCTGAGTTATATAGGTGTCAGAAGATCTGGAAGAA  596

seq1  GGAAAGTCCAGGGGATCACCTGGTCTAGAAATTTGGGGCTAGTTTGGGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTCCAGGGGATCACCTGGTCTAGAAATTTGGGGCTAGTTTGGGGA  646

seq1  GGCATGCCAGCCAGGAGGGACCTATATGCAGTAGAGACAGAGGGATGCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCCAGCCAGGAGGGACCTATATGCAGTAGAGACAGAGGGATGCTG  696

seq1  AGAGAAACTGGAGGCCACTGTCCAGTTTGATATGTTAATGGACACCTTAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACTGGAGGCCACTGTCCAGTTTGATATGTTAATGGACACCTTAG  746

seq1  TTCAAAATTTTTGCCTTGGATTTAAGACCCAACTGGTTTTAGGCCTTTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATTTTTGCCTTGGATTTAAGACCCAACTGGTTTTAGGCCTTTGT  796

seq1  GTGAATGATACTTGACAGGTCCTCTTGCAAAGAAAGCTTGGGAAATTACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGATACTTGACAGGTCCTCTTGCAAAGAAAGCTTGGGAAATTACC  846

seq1  ATAGAGGAAGAAAGAAAGGACATATTTGAAATCAAGTATTCTTTCACCAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGGAAGAAAGAAAGGACATATTTGAAATCAAGTATTCTTTCACCAC  896

seq1  TGATCTCAAGAATTCAAACTCTTCTCAGTTATACACATCAGATATGACGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTCAAGAATTCAAACTCTTCTCAGTTATACACATCAGATATGACGT  946

seq1  CATCACCAATAACTTTTCTATTGTGCATCCCCACGCTAAAAGAAATTTGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCAATAACTTTTCTATTGTGCATCCCCACGCTAAAAGAAATTTGG  996

seq1  AGATGCATAACGGAATTC  1017
      ||||||||||||||||||
seq2  AGATGCATAACGGAATTC  1014

seq1: chr7_7704639_7705306
seq2: B6Ng01-022B14.g_71_738

seq1  GAATTCACTGCCTATGTAGACCAGAAGAAGGAAGCAGATACACTGGAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCCTATGTAGACCAGAAGAAGGAAGCAGATACACTGGAATA  50

seq1  GCAGTTACTGAGAATTGTGTTTCCCAATTAGTGTTTTTATTAAGGAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTACTGAGAATTGTGTTTCCCAATTAGTGTTTTTATTAAGGAAAGA  100

seq1  TCCTCTTCGAGAGAAAGAAGTATTAGACTGTTGTGCCATCATTACAGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCGAGAGAAAGAAGTATTAGACTGTTGTGCCATCATTACAGCCC  150

seq1  CTTTCTTTCTTTTTCCTTTTAATTATTTTTTATTTACATTCCAGCCAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTTTCCTTTTAATTATTTTTTATTTACATTCCAGCCAATA  200

seq1  GACATCTTCCTCATTCTTCTTCCCACAATCCCTCATCCCAATCCTCCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCTTCCTCATTCTTCTTCCCACAATCCCTCATCCCAATCCTCCTCC  250

seq1  CTCTTGCCTCTGATAGAGTGCTCCCTGACATCCTACTCTGACCCTAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCCTCTGATAGAGTGCTCCCTGACATCCTACTCTGACCCTAAATA  300

seq1  AGTCATCGCTTTTCTCTGGAACCTCAAGTATGTCAAAGACTAGACATCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCGCTTTTCTCTGGAACCTCAAGTATGTCAAAGACTAGACATCAC  350

seq1  TTCTCTTATTGAGGGCAGACCAGACCGTGTTCTGCTATATATGTGCCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTATTGAGGGCAGACCAGACCGTGTTCTGCTATATATGTGCCTGG  400

seq1  GGCCCATGTCCATGTATGGTGCCTGGTTGGTATCTGAGTTTGGGGTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCATGTCCATGTATGGTGCCTGGTTGGTATCTGAGTTTGGGGTTTTC  450

seq1  CCAGAGGACCGAGTTAGTTTAGACTGCTGGTCTTCCTATGGGTAGTCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGACCGAGTTAGTTTAGACTGCTGGTCTTCCTATGGGTAGTCCCT  500

seq1  TCTCTTCAGCTCCTTAAATCCTTCCCCTGGGTCAAACATAGGGATCCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCAGCTCCTTAAATCCTTCCCCTGGGTCAAACATAGGGATCCTTC  550

seq1  TCTTCAGTCCAGTTGGGTATAAGTATCTGCATGTGTCTTAGTCAGCTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGTCCAGTTGGGTATAAGTATCTGCATGTGTCTTAGTCAGCTGCT  600

seq1  GGTAGGGTCTCTCAGAGGACATCAATGATAGGCTTTTCTTTTTAAAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGGTCTCTCAGAGGACATCAATGATAGGCTTTTCTTTTTAAAGAAA  650

seq1  CCATAGTCAGTAAAAGTG  668
      ||||||||||||||||||
seq2  CCATAGTCAGTAAAAGTG  668