BAC Information

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BAC

Clone NameB6Ng01-022C09
Chromosome7 (Build37)
Map Location 135,113,632 - 135,114,495
singlet/doubletsinglet
Overlap geneFus
Upstream geneSez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36
Downstream genePycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022C09.bB6Ng01-022C09.g
ACCDH854445DH854446
length1,280865
definitionDH854445|Mus musculus domesticus DNA, BAC clone: B6Ng01-022C09, 5' end.DH854446|Mus musculus domesticus DNA, BAC clone: B6Ng01-022C09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaatagtttggaccagaaaagaaattcctcccgtcacatagta
atcaaaacaccaaatgcactaaacaaagaaagaatattaaaagcagtaag
gggaaaaggtcaagtaacagataaaggcagacctatcagaattacacctg
acttctccccagagactatgaaagccagaagattctgggcagatgcatac
agtccctaagagaacacaaatgccagcctaggctactatacctagaaaac
ctctcaattactatagatggagaaaccaaggtattccatgacaaaatgaa
aattacacaatatctttccacaaattcagcccttcaaaggataataaaga
gaaaactccaacacaaagagggaaactaagctcgagaaaaagcaagaaag
taatctttcaacaaacctaaagaagatagccacatgaacagaattccaac
tctaacaacaaaaataacaggaagcaacaacaattttttccttaatatct
cttaatatcaatggattcaattttccaataaaaagacatagactaacaga
ctggttatgtaaacaggacacaactttttgctgcatataggaaacccacc
tcagggacaaagacagacactaccttagagtaaaaggctgaaaaacaatt
ttccaagcaaatggtcccaagaaacaagatggagtagccattctaatatc
gaataaaatcaactttcaacctaaaattctcaaaaaagataaggagggac
acttcttactgatcaaatttaccaagatgaactcacaattctgaacattc
attaaaggaactgctaaaactcaaagcacacattacacctcacacaataa
tagtggaagacttcaacaccacattctcattaatggatagatcatggaaa
cagaaactaaacagagacacagtgaaactaacagaagttatgaaacaatg
gatttaacagatatctctagaacatttcatcctaaaacaaaaggatatac
cttcttctcagcactcatggtaccttctccaaagttgatcatataattga
caccagcaggcctcaacagatcagaaataattgaaataatcccttgcgcc
gttcaaatcactatggacctaggctggatcctcaataaacactaatatat
agaaagtcgctatccgtgggggagctgacacccttatcaatgataatctt
gtcaggggagattagtaggattagactgtaggtttaataatggagcaaac
tgatccaacttttgggaacacagtgagact
gaattcttgaagttggctgacaatctgtgattcacagaggtggtgccatt
tttacctcacaagggcaaaacatttttctttccatatcagcacatttaaa
atgtagttagggccaggagtggtggcacacacaactttatccagcactct
gggaggcagaggctagtagatctcttgaatcttgagttggagaccagcct
ggtctacaaggtgagttccaggacagccaagggctacacagaaatcctgt
cttgaaaaaaacaaaaacagattaaaatgcagtttgtaggaatcttttgt
gttatgattagtggcacaggtgtctagatttaggacagatagaatggaat
tgaacctttattaaacagtgatattagtgacattgaagatgtggaatgct
gctgtaatcttagtacctgggatgtggcggtggagagtcagggtcttgtt
catttaggactggttctcaaccttccattagatggaattagctgtaaccc
tttaatacaattcctcatcttgtgtgacccccaactataagattattttc
cttactactttatatactgttaatggtaacagatatgttcaaagaaagag
gtgtcacctgacaggttgagaaccactgatttagaagttgaggcagcttg
aattctgtgagacctgtcataaaggattgggtgggtgggtgcagagatga
cctagcagctgagactggccagatacttgactatatatttgaggatggtc
ttgagccttctgattttcctgcctccaagtgttgggagcagaagcacgta
ttataatacttgctctttttgttttgttgttttttgagacagtgtttctt
ctgggtaagcccttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_135113632_135114495
seq2: B6Ng01-022C09.g_69_933

seq1  GAATTCTTGAAGTTGGCTGACAATCTGTGATTCACAGAGGTGGTGCCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAAGTTGGCTGACAATCTGTGATTCACAGAGGTGGTGCCATT  50

seq1  TTTACCTCACAAGGGCAAAACATTTTTCTTTCCATATCAGCACATTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTCACAAGGGCAAAACATTTTTCTTTCCATATCAGCACATTTAAA  100

seq1  ATGTAGTTAGGGCCAGGAGTGGTGGCACACACAACTTTATCCAGCACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGTTAGGGCCAGGAGTGGTGGCACACACAACTTTATCCAGCACTCT  150

seq1  GGGAGGCAGAGGCTAGTAGATCTCTTGAATCTTGAGTTGGAGACCAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGAGGCTAGTAGATCTCTTGAATCTTGAGTTGGAGACCAGCCT  200

seq1  GGTCTACAAGGTGAGTTCCAGGACAGCCAAGGGCTACACAGAAATCCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTACAAGGTGAGTTCCAGGACAGCCAAGGGCTACACAGAAATCCTGT  250

seq1  CTTGAAAAAAACAAAAACAGATTAAAATGCAGTTTGTAGGAATCTTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAAAAACAAAAACAGATTAAAATGCAGTTTGTAGGAATCTTTTGT  300

seq1  GTTATGATTAGTGGCACAGGTGTCTAGATTTAGGACAGATAGAATGGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGATTAGTGGCACAGGTGTCTAGATTTAGGACAGATAGAATGGAAT  350

seq1  TGAACCTTTATTAAACAGTGATATTAGTGACATTGAAGATGTGGAATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTTTATTAAACAGTGATATTAGTGACATTGAAGATGTGGAATGCT  400

seq1  GCTGTAATCTTAGTACCTGGGATGTGGCGGTGGAGAGTCAGGGTCTTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAATCTTAGTACCTGGGATGTGGCGGTGGAGAGTCAGGGTCTTGTT  450

seq1  CATTTAGGACTGGTTCTCAACCTTCCATTAGATGGAATTAGCTGTAACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGGACTGGTTCTCAACCTTCCATTAGATGGAATTAGCTGTAACCC  500

seq1  TTTAATACAATTCCTCATCTTGTGTGACCCCCAACTATAAGATTATTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATACAATTCCTCATCTTGTGTGACCCCCAACTATAAGATTATTTTC  550

seq1  CTTACTACTTTATATACTGTTAATGGTAACAGATATGTTCAAAGAAAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTACTTTATATACTGTTAATGGTAACAGATATGTTCAAAGAAAGAG  600

seq1  GTGTCACCTGACAGGTTGAGAACCACTGATTTAGAAGTTGAGGCAGCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCACCTGACAGGTTGAGAACCACTGATTTAGAAGTTGAGGCAGCTTG  650

seq1  AATTCTGTGAGACCTGTCATAAAGGATTGGGTGGGTGGGTGCAGAGATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGTGAGACCTGTCATAAAGGATTGGGTGGGTGGGTGCAGAGATGA  700

seq1  CCTAGCAGCTGAGACTGGCCAGATACTTGACTATATATTTGAGGATGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCAGCTGAGACTGGCCAGATACTTGACTATATATTTGAGGATGGTC  750

seq1  TTGAGCCTTCTGATTTTCCTGCCTCCAAGTGTTGGGAGCAGAAGCACGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCCTTCTGATTTTCCTGCCTCCAAGTGTTGGGAGCAGAAGCACGTA  800

seq1  TTATAATACTTGCTCTTTTTGTTTGTTTGTTTTTTTGAGACAGTGTTTC-  849
      ||||||||||||||||||||||||  ||| ||||||||||||||||||| 
seq2  TTATAATACTTGCTCTTTTTGTTTTGTTG-TTTTTTGAGACAGTGTTTCT  849

seq1  TCTGGGT-AGCCCTGG  864
      ||||||| |||||| |
seq2  TCTGGGTAAGCCCTTG  865