BAC Information

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BAC

Clone NameB6Ng01-022D23
Chromosome7 (Build37)
Map Location 135,707,971 - 135,767,311
singlet/doubletdoublet
Overlap geneEG639030, Inpp5f
Upstream geneD030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3
Downstream geneLOC100043651, 1110007A13Rik, Sec23ip, LOC210714, LOC100043144, Ppapdc1a, Brwd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022D23.bB6Ng01-022D23.g
ACCDH854519DH854520
length1,075337
definitionDH854519|Mus musculus domesticus DNA, BAC clone: B6Ng01-022D23, 5' end.DH854520|Mus musculus domesticus DNA, BAC clone: B6Ng01-022D23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,707,971 - 135,709,052)(135,766,975 - 135,767,311)
sequence
gaattcttttctaaggaacaagagcaaaacaggaaaaatatgactccttc
tatgagacatcacaattttccccaggatgagaaagaaagaaaaaaaaagg
ttggatgagtttcttagataagtagaacacacacacacacacacacacac
acacacacacacacacacaatcactgtggttccatgttctgcctctcctg
gtggggtgcccaggagctgatggagtccacatctgcctcttctccactca
gtgccaccagcattgacagcagccttatcaaagcacgggtttttgcagat
tgtcctttgcactgtgacttagcagtgttcctggtctttagccaccagat
accagtcccctttcttaagtcaatctgaccccagacattgccaatagtgt
cccttgctgggcaaaacagcctcttaaactcaaagctctctccaatcctg
tagaactcttttgttgttgttttgttttgtttttcgagacagggtttctc
tgtgtagccctggctgtcctggcactcactctgtacaccaggctggcctc
gaactcagaaatccacctgcctctgcctaccaagtactgggattaaaggc
gtgcgccaccactgcccagctgacattccattttttacttcctccaaaaa
caatcctggctgctctgtaagatatacctacgcttttggggcaggtgctg
tttgctttggcaaagactagtccaccaggcagaagggggagcctttgcta
attaacctgggtgtctccaacacagctttgttcttctacccttgcaggga
agtgctaccagggcctccaatttaagagtcctgtggcttgagggcagttt
ctgcattggaagataataaaacaatattcaattactgttcctatttgctt
cccagaagtagcccagaatacaggagtggggactctttcactgcattacc
caggtgtctttgatgcctactatctgatagactctaattcttcgaataga
agtatcagactggaagcagagatggaaaaacttatcctttgtatctgcaa
gttccccagttatggttgtggggga
caggccagccagggctatcgaatgagacattggggaaaaaaaaaaaaaaa
aaagcattggtctatcagtgaaaataatacttgatgagatgtaatcaaga
ctaagctttaaaaaaaaaaaaaaaaaaacctaagcaaaaattgtctttaa
atccctactctatgcacttactttcttagaccaatggccaaagagacagg
aaacagtgagacatgaacaggttatgtaactgaccagggaatgaaggact
catgggttttaggagctgctgaactttactgtttagtacaatatgaaatg
aacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_135707971_135709052
seq2: B6Ng01-022D23.b_49_1123

seq1  GAATTCTTTTCTAAGGAACAAGAGCAAAACAGGAAAAATATGACTCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTAAGGAACAAGAGCAAAACAGGAAAAATATGACTCCTTC  50

seq1  TATGAGACATCACAATTTTCCCCAGGATGAGAAAGAAAGAAAAAAAAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGACATCACAATTTTCCCCAGGATGAGAAAGAAAGAAAAAAAAAGG  100

seq1  TTGGATGAGTTTCTTAGATAAGTAGAACACACACACACACACACACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGAGTTTCTTAGATAAGTAGAACACACACACACACACACACACAC  150

seq1  ACACACACACACACACACAATCACTGTGGTTCCATGTTCTGCCTCTCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACAATCACTGTGGTTCCATGTTCTGCCTCTCCTG  200

seq1  GTGGGGTGCCCAGGAGCTGATGGAGTCCACATCTGCCTCTTCTCCACTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTGCCCAGGAGCTGATGGAGTCCACATCTGCCTCTTCTCCACTCA  250

seq1  GTGCCACCAGCATTGACAGCAGCCTTATCAAAGCACGGGTTTTTGCAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCACCAGCATTGACAGCAGCCTTATCAAAGCACGGGTTTTTGCAGAT  300

seq1  TGTCCTTTGCACTGTGACTTAGCAGTGTTCCTGGTCTTTAGCCACCAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTTGCACTGTGACTTAGCAGTGTTCCTGGTCTTTAGCCACCAGAT  350

seq1  ACCAGTCCCCTTTCTTAAGTCAATCTGACCCCAGACATTGCCAATAGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTCCCCTTTCTTAAGTCAATCTGACCCCAGACATTGCCAATAGTGT  400

seq1  CCCTTGCTGGGCAAAACAGCCTCTTAAACTCAAAGCTCTCTCCAATCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGCTGGGCAAAACAGCCTCTTAAACTCAAAGCTCTCTCCAATCCTG  450

seq1  TAGAACTCTTTTGTTGTTGTTTTGTTTTGTTTTTCGAGACAGGGTTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTCTTTTGTTGTTGTTTTGTTTTGTTTTTCGAGACAGGGTTTCTC  500

seq1  TGTGTAGCCCTGGCTGTCCTGGCACTCACTCTGTACACCAGGCTGGCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGCCCTGGCTGTCCTGGCACTCACTCTGTACACCAGGCTGGCCTC  550

seq1  GAACTCAGAAATCCACCTGCCTCTGCCTACCAAGTACTGGGATTAAAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGAAATCCACCTGCCTCTGCCTACCAAGTACTGGGATTAAAGGC  600

seq1  GTGCGCCACCACTGCCCAGCTGACATTCCATTTTTTACTTCCTCCAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGCCACCACTGCCCAGCTGACATTCCATTTTTTACTTCCTCCAAAAA  650

seq1  CAATCCTGGCTGCTCTGTAAGATATACCTACGCTTTTGGGGCAGGTGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTGGCTGCTCTGTAAGATATACCTACGCTTTTGGGGCAGGTGCTG  700

seq1  TTTGCTTTGGCAAAGACTAGTCCACCAGGCAGAAGGGGGAGCCTTTGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTGGCAAAGACTAGTCCACCAGGCAGAAGGGGGAGCCTTTGCTA  750

seq1  ATTAACCTGGGTGTCTCCAACACAGCTTTGTTCTTCTACCCTTGCAGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACCTGGGTGTCTCCAACACAGCTTTGTTCTTCTACCCTTGCAGGGA  800

seq1  AGTGCTACCAGGGCCTCCAATTTAAGAGTCCTGTGGCTTGAGGGCAGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTACCAGGGCCTCCAATTTAAGAGTCCTGTGGCTTGAGGGCAGTTT  850

seq1  CTGCATTGGAAGATAATAAAACAATATTCAATTACTGTTCCTATTTGCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTGGAAGATAATAAAACAATATTCAATTACTGTTCCTATTTGCTT  900

seq1  CCCAGAAGTAGCCCAGAATACAGGAGTGGGGACTCTTTCAACTGCATTAC  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCCAGAAGTAGCCCAGAATACAGGAGTGGGGACTCTTTC-ACTGCATTAC  949

seq1  CCAGGTGTCTTTGATGCCTACTATCTGATAGACTCTAATTCTTCGAATAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGTCTTTGATGCCTACTATCTGATAGACTCTAATTCTTCGAATAG  999

seq1  AAGGTATCAGACTGGGAGGCAGAGATGGATAAAACTTATCCTTTGTAGTC  1050
      || |||||||||| ||| ||||||||||| ||||||||||||||||| ||
seq2  AA-GTATCAGACT-GGAAGCAGAGATGGA-AAAACTTATCCTTTGTA-TC  1045

seq1  TGCAAGTTCCCCCAGCTATGGTAGGTGGGGGA  1082
      |||||||| |||||| ||||||  ||||||||
seq2  TGCAAGTT-CCCCAGTTATGGT-TGTGGGGGA  1075

seq1: chr7_135766975_135767311
seq2: B6Ng01-022D23.g_73_409 (reverse)

seq1  CACACACACACACACACACACACACACACACACTGTTCATTTCATATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACTGTTCATTTCATATTGT  50

seq1  ACTAAACAGTAAAGTTCAGCAGCTCCTAAAACCCATGAGTCCTTCATTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACAGTAAAGTTCAGCAGCTCCTAAAACCCATGAGTCCTTCATTCC  100

seq1  CTGGTCAGTTACATAACCTGTTCATGTCTCACTGTTTCCTGTCTCTTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCAGTTACATAACCTGTTCATGTCTCACTGTTTCCTGTCTCTTTGG  150

seq1  CCATTGGTCTAAGAAAGTAAGTGCATAGAGTAGGGATTTAAAGACAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGGTCTAAGAAAGTAAGTGCATAGAGTAGGGATTTAAAGACAATTT  200

seq1  TTGCTTAGGTTTTTTTTTTTTTTTTTTTAAAGCTTAGTCTTGATTACATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTAGGTTTTTTTTTTTTTTTTTTTAAAGCTTAGTCTTGATTACATC  250

seq1  TCATCAAGTATTATTTTCACTGATAGACCAATGCTTTTTTTTTTTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAAGTATTATTTTCACTGATAGACCAATGCTTTTTTTTTTTTTTTT  300

seq1  TTCCCCAATGTCTCATTCGATAGCCCTGGCTGGCCTG  337
      |||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAATGTCTCATTCGATAGCCCTGGCTGGCCTG  337