BAC Information

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BAC

Clone NameB6Ng01-022E08
Chromosome7 (Build37)
Map Location 103,512,533 - 103,677,788
singlet/doubletdoublet
Overlap geneOdz4, LOC666858
Upstream geneLOC666823, Frda-ps, EG666836, LOC670727
Downstream geneNars2, Gab2, LOC100040457, Usp35, EG622320, Alg8, Ndufc2, Thrsp, Kctd14, Ints4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022E08.bB6Ng01-022E08.g
ACCDH854537DH854538
length843741
definitionDH854537|Mus musculus domesticus DNA, BAC clone: B6Ng01-022E08, 5' end.DH854538|Mus musculus domesticus DNA, BAC clone: B6Ng01-022E08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,676,947 - 103,677,788)(103,512,533 - 103,513,273)
sequence
gaattcaagccttgtctttcggacttgctgtagctaccattaacctccca
tcaccctttcccaaggacctcatttgaactagttttgtgtatggcatgag
atataccaatgtggcttttgtggttttatcctgtaggataatactattta
gttgggggaaccaatccagatacatcagtcactacctgagatctagcagc
aggatgcttcatccagcgaaatgggagaagatctggcctggcttctttag
gaaaaccaaaactgtgagagctgggtgggggcagtgggcatttggcagtc
actggtgttggggagagaagagaactagtctattggcttcagggtcccca
tccttgggctaatctgggcgggcactcaattacttatgtgcttcacatat
gtgttcttttggcatttcacatgtatgatcagttgatgaatggttaaaaa
caaattaggaatcaactccctttacatagtgatttggcctgaccgcagca
agagatgtacagagcactggcttcccagctgggctaacctgaacatccga
ttctttctatgcatactgcctatcttttatgagctagctagcactctagg
ttttaggaatacagaaaaaataaacctcccattttgcctgctttcttcta
tgccctggaaacttcttcacagctttctgagtactttttctaaaaaagga
ctgagacatggccctgtggtaacttcatccagctaaataggagaagagct
ggcctggcttgaccactgagagctttgccatttccactgaccggtaagca
gtgcttgtcacagcagcatctgggagcctgaatgaaatgcaga
gaattcactcatgagaagaaacttatttgttcctttcgccctctccatct
ataggggacatttattgatgatataataataagtcttcagtgttatgatt
gagctggcaagatcgaatacttggcagaccttggaccatttcctcgacat
gtctgctggaaaatgtggttttcttgtgtttttccttattatcctccctg
accacattacatttgagtgcagacttgtttcctcttgcctcactcagtgc
cctttccccaacccaaattcatttccttccccttgcctttctgagatcac
actctcatttcagctactgttaatcttgcgtgagtgatgagggtcaaact
caggttcttgtgtttacatagtaaaccgttgaggcatctcgcaagcccct
gaggtgatttcttagtggtgctccctcttgagtgtggcctgcctttggtt
gttactccaaagtgttggttgttgacctatcaagtcattggaaatcacat
tagagttgcagggctatccacctagccgtcaccaccaaatagaatggatt
tctcaagaaccttctatttgtttcaccagcacacatcaagctgaacagag
tagagctctgtattccattctattcatttcaacttcaagggacctttggg
aatcacagacttgctgtcggagccagtgaactgggggcagacacctaagc
caaggcagggttggtaatgactcttgaaaatgacattgttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_103676947_103677788
seq2: B6Ng01-022E08.b_44_886 (reverse)

seq1  TCTGCATTTCATACAGGCTCCCAGATGCTGCTGTGACAAGCACTGCTTAC  50
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCTGCATTTCATTCAGGCTCCCAGATGCTGCTGTGACAAGCACTGCTTAC  50

seq1  CGGTCAGTGG-AATGGCAAGGCTCTCAGTGGTCAAGCCAGGCCAGCTCTT  99
      |||||||||| |||||||| ||||||||||||||||||||||||||||||
seq2  CGGTCAGTGGAAATGGCAAAGCTCTCAGTGGTCAAGCCAGGCCAGCTCTT  100

seq1  CTCCTATTTAGCTGGATGAAGTTACCACAGGGCCATGTCTCAGTCCTTTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTATTTAGCTGGATGAAGTTACCACAGGGCCATGTCTCAGTCCTTTT  150

seq1  TTAGAAAAAGTACTCAGAAAGCTGTGAAGAAGTTTCCAGGGCATAGAAGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAAAGTACTCAGAAAGCTGTGAAGAAGTTTCCAGGGCATAGAAGA  200

seq1  AAGCAGGCAAAATGGGAGGTTTATTTTTTCTGTATTCCTAAAACCTAGAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGCAAAATGGGAGGTTTATTTTTTCTGTATTCCTAAAACCTAGAG  250

seq1  TGCTAGCTAGCTCATAAAAGATAGGCAGTATGCATAGAAAGAATCGGATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCTAGCTCATAAAAGATAGGCAGTATGCATAGAAAGAATCGGATG  300

seq1  TTCAGGTTAGCCCAGCTGGGAAGCCAGTGCTCTGTACATCTCTTGCTGCG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTTAGCCCAGCTGGGAAGCCAGTGCTCTGTACATCTCTTGCTGCG  350

seq1  GTCAGGCCAAATCACTATGTAAAGGGAGTTGATTCCTAATTTGTTTTTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCCAAATCACTATGTAAAGGGAGTTGATTCCTAATTTGTTTTTAA  400

seq1  CCATTCATCAACTGATCATACATGTGAAATGCCAAAAGAACACATATGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCATCAACTGATCATACATGTGAAATGCCAAAAGAACACATATGTG  450

seq1  AAGCACATAAGTAATTGAGTGCCCGCCCAGATTAGCCCAAGGATGGGGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACATAAGTAATTGAGTGCCCGCCCAGATTAGCCCAAGGATGGGGAC  500

seq1  CCTGAAGCCAATAGACTAGTTCTCTTCTCTCCCCAACACCAGTGACTGCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGCCAATAGACTAGTTCTCTTCTCTCCCCAACACCAGTGACTGCC  550

seq1  AAATGCCCACTGCCCCCACCCAGCTCTCACAGTTTTGGTTTTCCTAAAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCCACTGCCCCCACCCAGCTCTCACAGTTTTGGTTTTCCTAAAGA  600

seq1  AGCCAGGCCAGATCTTCTCCCATTTCGCTGGATGAAGCATCCTGCTGCTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGCCAGATCTTCTCCCATTTCGCTGGATGAAGCATCCTGCTGCTA  650

seq1  GATCTCAGGTAGTGACTGATGTATCTGGATTGGTTCCCCCAACTAAATAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCAGGTAGTGACTGATGTATCTGGATTGGTTCCCCCAACTAAATAG  700

seq1  TATTATCCTACAGGATAAAACCACAAAAGCCACATTGGTATATCTCATGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCCTACAGGATAAAACCACAAAAGCCACATTGGTATATCTCATGC  750

seq1  CATACACAAAACTAGTTCAAATGAGGTCCTTGGGAAAGGGTGATGGGAGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACAAAACTAGTTCAAATGAGGTCCTTGGGAAAGGGTGATGGGAGG  800

seq1  TTAATGGTAGCTACAGCAAGTCCGAAAGACAAGGCTTGAATTC  842
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGTAGCTACAGCAAGTCCGAAAGACAAGGCTTGAATTC  843

seq1: chr7_103512533_103513273
seq2: B6Ng01-022E08.g_71_811

seq1  GAATTCACTCATGAGAAGAAACTTATTTGTTCCTTTCGCCCTCTCCATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCATGAGAAGAAACTTATTTGTTCCTTTCGCCCTCTCCATCT  50

seq1  ATAGGGGACATTTATTGATGATATAATAATAAGTCTTCAGTGTTATGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGGACATTTATTGATGATATAATAATAAGTCTTCAGTGTTATGATT  100

seq1  GAGCTGGCAAGATCGAATACTTGGCAGACCTTGGACCATTTCCTCGACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGCAAGATCGAATACTTGGCAGACCTTGGACCATTTCCTCGACAT  150

seq1  GTCTGCTGGAAAATGTGGTTTTCTTGTGTTTTTCCTTATTATCCTCCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCTGGAAAATGTGGTTTTCTTGTGTTTTTCCTTATTATCCTCCCTG  200

seq1  ACCACATTACATTTGAGTGCAGACTTGTTTCCTCTTGCCTCACTCAGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATTACATTTGAGTGCAGACTTGTTTCCTCTTGCCTCACTCAGTGC  250

seq1  CCTTTCCCCAACCCAAATTCATTTCCTTCCCCTTGCCTTTCTGAGATCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCCCAACCCAAATTCATTTCCTTCCCCTTGCCTTTCTGAGATCAC  300

seq1  ACTCTCATTTCAGCTACTGTTAATCTTGCGTGAGTGATGAGGGTCAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCATTTCAGCTACTGTTAATCTTGCGTGAGTGATGAGGGTCAAACT  350

seq1  CAGGTTCTTGTGTTTACATAGTAAACCGTTGAGGCATCTCGCAAGCCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCTTGTGTTTACATAGTAAACCGTTGAGGCATCTCGCAAGCCCCT  400

seq1  GAGGTGATTTCTTAGTGGTGCTCCCTCTTGAGTGTGGCCTGCCTTTGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGATTTCTTAGTGGTGCTCCCTCTTGAGTGTGGCCTGCCTTTGGTT  450

seq1  GTTACTCCAAAGTGTTGGTTGTTGACCTATCAAGTCATTGGAAATCACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTCCAAAGTGTTGGTTGTTGACCTATCAAGTCATTGGAAATCACAT  500

seq1  TAGAGTTGCAGGGCTATCCACCTAGCCGTCACCACCAAATAGAATGGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTGCAGGGCTATCCACCTAGCCGTCACCACCAAATAGAATGGATT  550

seq1  TCTCAAGAACCTTCTATTTGTTTCACCAGCACACATCAAGCTGAACAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGAACCTTCTATTTGTTTCACCAGCACACATCAAGCTGAACAGAG  600

seq1  TAGAGCTCTGTATTCCATTCTATTCATTTCAACTTCAAGGGACCTTTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCTCTGTATTCCATTCTATTCATTTCAACTTCAAGGGACCTTTGGG  650

seq1  AATCACAGACTTGCTGTCGGAGCCAGTGAACT-GGGGCAGACACCTAAGC  699
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AATCACAGACTTGCTGTCGGAGCCAGTGAACTGGGGGCAGACACCTAAGC  700

seq1  CAAGGCAGGGTTGGTAATGACTCTTGATAAATGACACTGTTC  741
      ||||||||||||||||||||||||||| |||||||| |||||
seq2  CAAGGCAGGGTTGGTAATGACTCTTGA-AAATGACATTGTTC  741