BAC Information

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BAC

Clone NameB6Ng01-022M09
Chromosome7 (Build37)
Map Location 97,396,357 - 97,558,547
singlet/doubletdoublet
Overlap geneCcdc83, Sytl2
Upstream geneTmem135, LOC100039969, Fzd4, Prss23, LOC100040001, Me3, Ccdc81, l7Rn6, Eed, E230029C05Rik, EG384719, 2310010J17Rik, Picalm
Downstream geneCcdc89, Crebzf, Tmem126a, Tmem126b, B230218P12Rik, LOC666689, LOC621816, LOC100039943, Dlg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022M09.bB6Ng01-022M09.g
ACCDH854886DH854887
length1,016988
definitionDH854886|Mus musculus domesticus DNA, BAC clone: B6Ng01-022M09, 5' end.DH854887|Mus musculus domesticus DNA, BAC clone: B6Ng01-022M09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,396,357 - 97,397,379)(97,557,547 - 97,558,547)
sequence
gaattcatgagaaaacacaagagcagcaacagaagcaactgcatgggtaa
atctgaaagttatgtacttagactttctgtaattattttatgtgaaaaaa
tatcagtgtggagcaataaacacagacctacgcttcattaccaataagtc
agtcccaatttataaagtgcgttttatgtgagaatgcaaatgaggagggg
tgcaactgagatcgagttggtattggtcttaattagattactatagatta
ggatgttgattagagtcctcacggaagtcactgagaaaataactaagatg
ggataaaggaaatgatagttaaaagggtacacaagaaagagtgtaacaca
aaagaaaataatggaagaataaaagtaaaacaaacacgagacacagacaa
cagggatggaaaggtgcgtgtggcgggacacacctgtcatcccagcacgt
ggaaggtagaggtcgcaaagcgacatcttaatcctgccctgctgtgcttc
cctcaaccatacctgactaggagtgccagtgctgaccactggagcatgtg
ctgtagcccctttgaaggcagcttcctcttctttcacactttaatcatac
tgtgtggagtctcaaggacattgacaaggcttctttttcactcttactct
tcacctgtgcctactttaatttttgttacaaatactgccactctgacaac
cccagagtcacaggcatattgccaagagattgtcaagagccacggatccc
tgcggaatggacaagagctgccattttacaagagggaaactgaggctgca
ggggcctgggaatcactgcacaaaccacccagacaccgatctcagtcaaa
cagagatgggttattgaataccacatcccagactggttgatcaggctgcc
ggggagactcgggagctgaacttcactatctagctagaaatctacaaagt
tttagtctagagcaacaaacatctggtgccgagttatttcaccttcagga
ctaggaacggctctat
gaattcaatgtttcattagaggttactaagtaaattcgtcatattatgta
ggtcattgtcttcaccgctgtcctttctctctccaccccatcccaggagt
ttcctcattgctttgcccaaaaccttcttacttagaagcccagcaagcat
ttcaataaccaaacggcaggcctgcactgcaacacggattgtggtaggaa
acatgtgaagctagctttttctttggtgtggaagcaacagttcagttttc
ctagcttgttcaactctctccttgaatgtcggcatcacgccacacttctt
ctgggccgtacatcttgtcatcgtttaactcccttgagtcgtgcaaccaa
agaaatgcatgcagattaagttgagcatgcttctaaaagtcattagtgac
aacgggagagggtatttgtccatgaggccaactctccagttcagatgccc
ctggggcgtagtttttgatggcggaatcggctgactaggatcacttggaa
agcttggcaatcagaagcatccggaggggcagcgtcgcttcaacccaagt
gttgggagagtttaccatcttctcccagagagcaacttcctcagaagtag
aatccatccaatccacttcagtcccgtagctttttcctgaaaaagagttt
tacattttcatttacatttcccacttggggcagggaagacaacgaggagt
gtgcgcacacctggagagcacacctgggtgtaggaagaactagtttacta
cgcaggtcgcttgtattaatccacatggctcctacataattgctcttcac
ctgaacgtgaatgtgggaactggatcataagtttttcagggcttagagga
atcgggaggttaaatactgaggagaggagactctagatgatgccttagga
gtttgctgaaagactcatctcatatttgccttagaaatgaactgtttatt
atcttgttgtattactgtttgtttggagattggttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_97396357_97397379
seq2: B6Ng01-022M09.b_47_1062

seq1  GAATTCATGAGAAAACACAAGAGCAGCAACAGAAGCAACTGCATGGGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAGAAAACACAAGAGCAGCAACAGAAGCAACTGCATGGGTAA  50

seq1  ATCTGAAAGTTATGTACTTAGACTTTCTGTAATTATTTTATGTGAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAAGTTATGTACTTAGACTTTCTGTAATTATTTTATGTGAAAAAA  100

seq1  TATCAGTGTGGAGCAATAAACACAGACCTACGCTTCATTACCAATAAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTGTGGAGCAATAAACACAGACCTACGCTTCATTACCAATAAGTC  150

seq1  AGTCCCAATTTATAAAGTGCGTTTTATGTGAGAATGCAAATGAGGAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCAATTTATAAAGTGCGTTTTATGTGAGAATGCAAATGAGGAGGGG  200

seq1  TGCAACTGAGATCGAGTTGGTATTGGTCTTAATTAGATTACTATAGATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACTGAGATCGAGTTGGTATTGGTCTTAATTAGATTACTATAGATTA  250

seq1  GGATGTTGATTAGAGTCCTCACGGAAGTCACTGAGAAAATAACTAAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTTGATTAGAGTCCTCACGGAAGTCACTGAGAAAATAACTAAGATG  300

seq1  GGATAAAGGAAATGATAGTTAAAAGGGTACACAAGAAAGAGTGTAACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAAGGAAATGATAGTTAAAAGGGTACACAAGAAAGAGTGTAACACA  350

seq1  AAAGAAAATAATGGAAGAATAAAAGTAAAACAAACACGAGACACAGACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAATAATGGAAGAATAAAAGTAAAACAAACACGAGACACAGACAA  400

seq1  CAGGGATGGAAAGGTGCGTGTGGCGGGACACACCTGTCATCCCAGCACGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATGGAAAGGTGCGTGTGGCGGGACACACCTGTCATCCCAGCACGT  450

seq1  GGAAGGTAGAGGTCGCAAAGCGACATCTTAATCCTGCCCTGCTGTGCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGTAGAGGTCGCAAAGCGACATCTTAATCCTGCCCTGCTGTGCTTC  500

seq1  CCTCAACCATACCTGACTAGGAGTGCCAGTGCTGACCACTGGAGCATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAACCATACCTGACTAGGAGTGCCAGTGCTGACCACTGGAGCATGTG  550

seq1  CTGTAGCCCCTTTGAAGGCAGCTTCCTCTTCTTTCACACTTTAATCATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCCCCTTTGAAGGCAGCTTCCTCTTCTTTCACACTTTAATCATAC  600

seq1  TGTGTGGAGTCTCAAGGACATTGACAAGGCTTCTTTTTCACTCTTACTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGAGTCTCAAGGACATTGACAAGGCTTCTTTTTCACTCTTACTCT  650

seq1  TCACCTGTGCCTACTTTAATTTTTGTTACAAATACTGCCACTCTGACAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGTGCCTACTTTAATTTTTGTTACAAATACTGCCACTCTGACAAC  700

seq1  CCCAGAGTCACAGGCATATTGCCAAGAGATTGTCAAGAGCCACGGATCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGTCACAGGCATATTGCCAAGAGATTGTCAAGAGCCACGGATCCC  750

seq1  TGCGGAATGGACAAGAGCTGCCATTTTACAAGAGGGAAACTGAGGCTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGAATGGACAAGAGCTGCCATTTTACAAGAGGGAAACTGAGGCTGCA  800

seq1  GGGGCCTGGGAATCACTGCACAAACCACCCAGACACCGATCTCAGTCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCTGGGAATCACTGCACAAACCACCCAGACACCGATCTCAGTCAAA  850

seq1  CAGAGATGGTTTATTGAATACCACATCCCAAGACTGGTTGATCAGGGCTG  900
      ||||||||| ||||||||||||||||||| |||||||||||||| |||||
seq2  CAGAGATGGGTTATTGAATACCACATCCC-AGACTGGTTGATCA-GGCTG  898

seq1  CCGGGGAGACTCGGGAGCTGAACTTCACTATCTAGCTAGAATCCTACAGA  950
      |||||||||||||||||||||||||||||||||||||||||  ||||| |
seq2  CCGGGGAGACTCGGGAGCTGAACTTCACTATCTAGCTAGAAATCTACAAA  948

seq1  GCTTTTAAGTCTGAGAGCCACAAACATCT-GTGCCGAGTTATTTCACCAT  999
      |  ||| ||||| ||||| |||||||||| |||||||||||||||||| |
seq2  G--TTTTAGTCT-AGAGCAACAAACATCTGGTGCCGAGTTATTTCACCTT  995

seq1  CAGGACTTAGGAACGTGTCTCTAT  1023
      |||||| |||||||  | ||||||
seq2  CAGGAC-TAGGAAC--GGCTCTAT  1016

seq1: chr7_97557547_97558547
seq2: B6Ng01-022M09.g_68_1055 (reverse)

seq1  AAAACCCAATACTCCAAAACAAAACAGTAATAACAACAATGATAATAAAC  50
      |||| ||||| |||||||   |||||||||| ||||||| ||||||||||
seq2  AAAAACCAAT-CTCCAAA--CAAACAGTAAT-ACAACAA-GATAATAAAC  45

seq1  AGTTCATTTCTAAGGCAAATTATGAGATTGAGTCTTTCAGGCAAAACTCC  100
      ||||||||||||||||||| ||||||| ||||||||||||   ||||| |
seq2  AGTTCATTTCTAAGGCAAA-TATGAGA-TGAGTCTTTCAG--CAAACT-C  90

seq1  CTAAGGCATCATCTAGAGTCTCCTCCTCCTCAGTATTTAATCCTCCCGAT  150
      |||||||||||||||||||||||| ||||||||||||||| |||||||||
seq2  CTAAGGCATCATCTAGAGTCTCCT-CTCCTCAGTATTTAA-CCTCCCGAT  138

seq1  TCCTCTAAGCCCTGAAAAACTTATGATCCAGTTCCCACATTCACGTTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTAAGCCCTGAAAAACTTATGATCCAGTTCCCACATTCACGTTCAG  188

seq1  GTGAAGAGCAATTATGTAGGAGCCATGTGGATTAATACAAGCGACCTGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAGCAATTATGTAGGAGCCATGTGGATTAATACAAGCGACCTGCG  238

seq1  TAGTAAACTAGTTCTTCCTTACACCCAGGTGTGCTCTCCAGGTGTGCGCA  300
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAGTAAACTAGTTCTTCC-TACACCCAGGTGTGCTCTCCAGGTGTGCGCA  287

seq1  CACTCCTCGTTGTCTTCCCTGCCCCAAGTGGGAAATGTAAATGAAAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTCGTTGTCTTCCCTGCCCCAAGTGGGAAATGTAAATGAAAATGT  337

seq1  AAAACTCTTTTTCAGGAAAAAGCTACGGGACTGAAGTGGATTGGATGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTTTTTCAGGAAAAAGCTACGGGACTGAAGTGGATTGGATGGAT  387

seq1  TCTACTTCTGAGGAAGTTGCTCTCTGGGAGAAGATGGTAAACTCTCCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTCTGAGGAAGTTGCTCTCTGGGAGAAGATGGTAAACTCTCCCAA  437

seq1  CACTTGGGTTGAAGCGACGCTGCCCCTCCGGATGCTTCTGATTGCCAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGGTTGAAGCGACGCTGCCCCTCCGGATGCTTCTGATTGCCAAGC  487

seq1  TTTCCAAGTGATCCTAGTCAGCCGATTCCGCCATCAAAAACTACGCCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAGTGATCCTAGTCAGCCGATTCCGCCATCAAAAACTACGCCCCA  537

seq1  GGGGCATCTGAACTGGAGAGTTGGCCTCATGGACAAATACCCTCTCCCGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATCTGAACTGGAGAGTTGGCCTCATGGACAAATACCCTCTCCCGT  587

seq1  TGTCACTAATGACTTTTAGAAGCATGCTCAACTTAATCTGCATGCATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTAATGACTTTTAGAAGCATGCTCAACTTAATCTGCATGCATTTC  637

seq1  TTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACGGCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTGCACGACTCAAGGGAGTTAAACGATGACAAGATGTACGGCCCA  687

seq1  GAAGAAGTGTGGCGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGTGTGGCGTGATGCCGACATTCAAGGAGAGAGTTGAACAAGCTA  737

seq1  GGAAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACTGAACTGTTGCTTCCACACCAAAGAAAAAGCTAGCTTCACATG  787

seq1  TTTCCTACCACAATCCGTGTTGCAGTGCAGGCCTGCCGTTTGGTTATTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTACCACAATCCGTGTTGCAGTGCAGGCCTGCCGTTTGGTTATTGA  837

seq1  AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTGCTGGGCTTCTAAGTAAGAAGGTTTTGGGCAAAGCAATGAGGA  887

seq1  AACTCCTGGGATGGGGTGGAGAGAGAAAGGACAGCGGTGAAGACAATGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTGGGATGGGGTGGAGAGAGAAAGGACAGCGGTGAAGACAATGAC  937

seq1  CTACATAATATGACGAATTTACTTAGTAACCTCTAATGAAACATTGAATT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAATATGACGAATTTACTTAGTAACCTCTAATGAAACATTGAATT  987

seq1  C  1001
      |
seq2  C  988