BAC Information

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BAC

Clone NameB6Ng01-023D01
Chromosome7 (Build37)
Map Location 88,187,955 - 88,189,164
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm, Crtc3, Iqgap1, LOC100042402, Zscan2, Wdr73, Nmb, Sec11a, Zfp592
Downstream geneAlpk3, Slc28a1, EG623286, LOC100043130, Pde8a, EG636544, Rps17, Cpeb1, LOC623355, Ap3b2, BC048679, Fsd2, Whdc1, Homer2, 2610204K14Rik, 3110040N11Rik, Btbd1, Tm6sf1, LOC100043161, Hdgfrp3, Bnc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023D01.bB6Ng01-023D01.g
ACCDH855179DH855180
length4101,194
definitionDH855179|Mus musculus domesticus DNA, BAC clone: B6Ng01-023D01, 5' end.DH855180|Mus musculus domesticus DNA, BAC clone: B6Ng01-023D01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aaaccccagagctatagaaagggcgagccaatagctcacacatctataac
cacagcactgctaatggaatactggaagcagagacaggaggatccttcaa
accccagcccagcccaccctgtatcctacattaaaacacaacagagagac
atcacctcaaataaggtagcaagcaaggacacctgaggttgtcctcggac
tctgccaaagctctggcatgcacatacacgcagatgcaggcatgcgtatg
tgcacgtgtgtgaacacacacacccaggataaaaagaaaaataacctagt
catgtacagttcaccctctgcatctgtgttttctatccccgtggattcaa
acaactgtagattgaaaatattctaaaaggcaaaactacaaggaatgggg
gggggggggt
gaattctgtgacattcatacaacattcagagactgctattgccacagcaa
atccagacttggtagaaatgggattagatgagactgggacaagttgtggg
aaggtgttcttggacccaacaggctcgggctaggtcctgtagcacaggga
aggggtgctggctgagttcctaggcttgatctttcaagggaggcatgaat
accaattaggaatcaagttggataaatatgcatgaccttttcacaactga
agactttttttttccttgctctatcaaatgccaaatttttagtgaaaagc
tagtggcagtgggaaaagttagtgcttgcctcggttccagagaggctctg
ctgtacacaccattttaatgagcattctttctggcaaggcctccacttct
ctgcttccccagctgacagtgaagggaagcaagccctactgagcgggtcc
caagccagccactgcccctttcccagttccttcacataccctgctttctc
ttcagatcccgtcagtccttcacctcatgctaatctcccccatgtgggag
attacccaacattgtaccccagatcgttcatgagagcaggttcttaagga
gggctttgagctgtatggctgcatttcttcccactcagaaaccatgggag
ctggagaacaaagaaggtggagaaactaagggtggagccactgtcctcat
atcagatccagcctcttggaatagtagaataggacctgctgtgggaaacc
tgtgctgccctcagccagtccctagcaccctcatcctcatgggctcctct
ctcagcagaggtaggaatcctcatccagctacttcaagactttcctgagg
tcatgagtgcgcaagcgctctaggttccaggctaccatgtggctaggggc
ttctgcacttgtagacacagtgaggtggagctcatctcactggatgtggg
gtcagttaggacggggcccgtttgcttatccatatgcagtgatgatgaag
atcccattcccagcccctcctcaggtcaagcatcttggttaacttcttac
cgaagacttcacttcatcatccaagggatccagctacccttttaattttc
gaaggcaaaaatcagccctaggttaaatgacaacatattggctacgtgat
gacgggctgacaacgtgctgctagtacagggctgctctgcgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_88187955_88189164
seq2: B6Ng01-023D01.g_70_1263

seq1  GAATTCTGTGACATTCATACAACATTCAGAGACTGCTATTGCCACAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGACATTCATACAACATTCAGAGACTGCTATTGCCACAGCAA  50

seq1  ATCCAGACTTGGTAGAAATGGGATTAGATGAGACTGGGACAAGTTGTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGACTTGGTAGAAATGGGATTAGATGAGACTGGGACAAGTTGTGGG  100

seq1  AAGGTGTTCTTGGACCCAACAGGCTCGGGCTAGGTCCTGTAGCACAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGTTCTTGGACCCAACAGGCTCGGGCTAGGTCCTGTAGCACAGGGA  150

seq1  AGGGGTGCTGGCTGAGTTCCTAGGCTTGATCTTTCAAGGGAGGCATGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGCTGGCTGAGTTCCTAGGCTTGATCTTTCAAGGGAGGCATGAAT  200

seq1  ACCAATTAGGAATCAAGTTGGATAAATATGCATGACCTTTTCACAACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTAGGAATCAAGTTGGATAAATATGCATGACCTTTTCACAACTGA  250

seq1  AGACTTTTTTTTTCCTTGCTCTATCAAATGCCAAATTTTTAGTGAAAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTTTTTTTCCTTGCTCTATCAAATGCCAAATTTTTAGTGAAAAGC  300

seq1  TAGTGGCAGTGGGAAAAGTTAGTGCTTGCCTCGGTTCCAGAGAGGCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGCAGTGGGAAAAGTTAGTGCTTGCCTCGGTTCCAGAGAGGCTCTG  350

seq1  CTGTACACACCATTTTAATGAGCATTCTTTCTGGCAAGGCCTCCACTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACACACCATTTTAATGAGCATTCTTTCTGGCAAGGCCTCCACTTCT  400

seq1  CTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGCCCTACTGAGCGGGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCCCCAGCTGACAGTGAAGGGAAGCAAGCCCTACTGAGCGGGTCC  450

seq1  CAAGCCAGCCACTGCCCCTTTCCCAGTTCCTTCACATACCCTGCTTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAGCCACTGCCCCTTTCCCAGTTCCTTCACATACCCTGCTTTCTC  500

seq1  TTCAGATCCCGTCAGTCCTTCACCTCATGCTAATCTCCCCCATGTGGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATCCCGTCAGTCCTTCACCTCATGCTAATCTCCCCCATGTGGGAG  550

seq1  ATTACCCAACATTGTACCCCAGATCGTTCATGAGAGCAGGTTCTTAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCCAACATTGTACCCCAGATCGTTCATGAGAGCAGGTTCTTAAGGA  600

seq1  GGGCTTTGAGCTGTATGGCTGCATTTCTTCCCACTCAGAAACCATGGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTGAGCTGTATGGCTGCATTTCTTCCCACTCAGAAACCATGGGAG  650

seq1  CTGGAGAACAAAGAAGGTGGAGAAACTAAGGGTGGAGCCACTGTCCTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAACAAAGAAGGTGGAGAAACTAAGGGTGGAGCCACTGTCCTCAT  700

seq1  ATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATCCAGCCTCTTGGAATAGTAGAATAGGACCTGCTGTGGGAAACC  750

seq1  TGTGCTGCCCTCAGCCAGTCCCTAGCACCCTCATCCTCATGGGCTCCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGCCCTCAGCCAGTCCCTAGCACCCTCATCCTCATGGGCTCCTCT  800

seq1  CTCAGCAGAGGTAGGAATCCTCATCCAGCTACTTCAAGACTTTCCTGAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAGAGGTAGGAATCCTCATCCAGCTACTTCAAGACTTTCCTGAGG  850

seq1  TCATGAGTGCGCAAGCGCTCTAGGTTCCAGGCTACCATGTGGCTAGGGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAGTGCGCAAGCGCTCTAGGTTCCAGGCTACCATGTGGCTAGGGGC  900

seq1  TTCTGCACTTGTAGACACAGTGAGGTGGAGCTCATCTCACTGGATGTGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCACTTGTAGACACAGTGAGGTGGAGCTCATCTCACTGGATGTGGG  950

seq1  GTTCAGTTAGGAACGGGGCCCGTTTGCTTATCCATTATGCAGTGATGATG  1000
      | ||||||||| |||||||||||||||||||||| |||||||||||||||
seq2  G-TCAGTTAGG-ACGGGGCCCGTTTGCTTATCCA-TATGCAGTGATGATG  997

seq1  AAGATCGCATTCCCAG-CCCTCCTCAGGTCCAGCATCTTGTTTAAC-TCT  1048
      |||||| ||||||||| ||||||||||||| ||||||||| ||||| |||
seq2  AAGATCCCATTCCCAGCCCCTCCTCAGGTCAAGCATCTTGGTTAACTTCT  1047

seq1  TACCAGAGACTTTCACTTCATCATCACAAGGATCTCAGCTACCCTTCTAT  1098
      ||||  |||| ||||||||||||||  | ||||| ||||||||||| || 
seq2  TACCGAAGAC-TTCACTTCATCATCCAAGGGATC-CAGCTACCCTTTTAA  1095

seq1  TTTACAGAGGCAAAAAACCAGCCTTAGGTTAAATGACAGACATATTGGGC  1148
      ||| |  |||| ||||| ||||| |||||||||||||| ||||||| |||
seq2  TTTTCGAAGGC-AAAAATCAGCCCTAGGTTAAATGACA-ACATATT-GGC  1142

seq1  TACCTGTGATGACGGTGCTGAGTCAAACCTGTGCTGCCTTAGTGACAGGG  1198
      |||  |||||||||| |||||  |||    |||||||  |||| ||||||
seq2  TAC--GTGATGACGG-GCTGA--CAA---CGTGCTGC--TAGT-ACAGGG  1181

seq1  CTGCTCTG-GCTG  1210
      |||||||| ||||
seq2  CTGCTCTGCGCTG  1194