BAC Information

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BAC

Clone NameB6Ng01-023L12
Chromosome2 (Build37)7 (Build37)
Map Location 86,727,166 - 86,727,49815,028,383 - 15,028,919
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneOlfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1
Downstream geneOlfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023L12.bB6Ng01-023L12.g
ACCDH855559DH855560
length958532
definitionDH855559|Mus musculus domesticus DNA, BAC clone: B6Ng01-023L12, 5' end.DH855560|Mus musculus domesticus DNA, BAC clone: B6Ng01-023L12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(86,727,166 - 86,727,498)(15,028,383 - 15,028,919)
sequence
gaattcattgttatctcatattcttagctcatataaaaccccaccattgt
tttccttcccacacagtccctcactcctctttttttacattaatttattt
atttttattattttctttatatacatttcaaatgctatcctgaaagttcc
ctatacctccccctctgccctgctcccctactcacccactccctcttctt
ggccctggcatttcatgtactggagcataaaaagtttgcaaataccaagg
ggcctctcttcccagtgatggccgactaggccatcttctgctacatatgc
agctagagacacaagctctggggtactggttaattcatattgttgttcca
cctatagggttgcagacaccttcagctacttggctgctttctctagcttc
tccattgggggccctgtgttccatctgatagaagactgtgagcatccact
tctgtatttgccagtcactggcatagcctcatacgagacagctataacag
ggtcccttcagcaaaaccttgctggcatatgcaatagtgtctgggtttgg
tggctgattatggaatagatccccaggtggggtagtctctgaatactcca
cccttttgtcttagctccaaattttgtctctgtaacttctttcatgagta
ttaggttccctattctaaggaggaacgaagtatccacccattggtcttcc
ctcttcttgattttcttttgtttgcaaattgtatcttgggtgttctatgt
ttctaggttaatatccacttatcagtgagtacatatctaatgacttcttt
tgtgattgggttacctcactaagaatgacatcctccagatacatccattt
gaccaagaatttcataaattcattcttttaatagctgagtagcacaccat
tatgtaatgtaccacagtttctgtattcattcttctgtgaggacatctgg
gttctttc
caggatttggggagcagtagattgcccagctctgtgttttctgggattac
ctaggctacagagtgaattgcagctctgtcagggatacatagtgagacct
ggactgaaaagtagtcaatcaatcaatcaataaataaatatataaaagct
aaaaaacaaaaaacaaaacaaaacaaaaaaaaaaaaacagaacagagggc
tttccacaaaaataacatgtggcatctaatgtgttcaccatacttgtcat
aatagaaattaaaatttaaaatactgtgagatttcattttaacacagtct
aaattgcttctatgaaggaaaaatggacaaatgctggtgaaatatgggaa
aaggctgaccatttattcttcagtgtatttaatgaaaaatgtggcagtgt
aaataagtacattcaattacttcttatgtacaactgtatggaagattttt
aaaggtgacagatgcattgtattacccagatgtatccttttctctctctc
tctctctctctctctctctctctctctctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86727166_86727498
seq2: B6Ng01-023L12.b_121_338

seq1  TCTTTTTTTACATTAATTTATTTATTTGTTCACATTACATCCAGATCCCA  50
                                                        
seq2  --------------------------------------------------  0

seq1  GAGCACCACACCTGAGTACCAACGTGCCCTGGTAGGATCAAGCTACACAT  100
                                                       |
seq2  -------------------------------------------------T  1

seq1  CTGCTACATGCCTACATATAACACTATTTTTAAACAATTTTTATTAGATA  150
      ||      |   ||||| |||   | | |||     ||||||||    ||
seq2  CT-----TTTTTTACAT-TAA---TTTATTT-----ATTTTTAT----TA  33

seq1  TTTTCTTCATTTACATTTTAAATGCTATTCCAAAAGTCCTCTATACC-CT  199
      ||||||| || ||||||| ||||||||| |  ||||| | ||||||| | 
seq2  TTTTCTTTATATACATTTCAAATGCTATCCTGAAAGTTCCCTATACCTCC  83

seq1  ACCCCCACCCTGTTCCCCAACACACCCACTCTTGCTTCCTGGCCATGACA  249
       || |  ||||| ||||| || |||||||||   |||| ||||| || ||
seq2  CCCTCTGCCCTGCTCCCCTACTCACCCACTCCCTCTTCTTGGCCCTGGCA  133

seq1  TTCCCCTGTACTGGGGCATATAA--TTTTCACAAGACCAA-GGGTCTCTC  296
      ||  | |||||||| ||||| ||  ||| || || ||||| ||| |||||
seq2  TT-TCATGTACTGGAGCATAAAAAGTTTGCA-AATACCAAGGGGCCTCTC  181

seq1  CTCCCAGTGATGGACGACTAGACCATCTTCTGCTACA  333
       |||||||||||| ||||||| |||||||||||||||
seq2  TTCCCAGTGATGGCCGACTAGGCCATCTTCTGCTACA  218

seq1: chr7_15028383_15028919
seq2: B6Ng01-023L12.g_68_604

seq1  GAATTCCAGGATTTGGGGAGCAGTAGATTGCCCAGCTCTGTGTTTTCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATTTGGGGAGCAGTAGATTGCCCAGCTCTGTGTTTTCTGG  50

seq1  GATTACCTAGGCTACAGAGTGAATTGCAGCTCTGTCAGGGATACATAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACCTAGGCTACAGAGTGAATTGCAGCTCTGTCAGGGATACATAGTG  100

seq1  AGACCTGGACTGAAAAGTAGTCAATCAATCAATCAATAAATAAATATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGGACTGAAAAGTAGTCAATCAATCAATCAATAAATAAATATATA  150

seq1  AAAGCTAAAAAACAAAAAACAAAACAAAACAAAAAAAAAAAAACAGAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAAAAAACAAAAAACAAAACAAAACAAAAAAAAAAAAACAGAACA  200

seq1  GAGGGCTTTCCACAAAAATAACATGTGGCATCTAATGTGTTCACCATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCTTTCCACAAAAATAACATGTGGCATCTAATGTGTTCACCATACT  250

seq1  TGTCATAATAGAAATTAAAATTTAAAATACTGTGAGATTTCATTTTAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATAATAGAAATTAAAATTTAAAATACTGTGAGATTTCATTTTAACA  300

seq1  CAGTCTAAATTGCTTCTATGAAGGAAAAATGGACAAATGCTGGTGAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTAAATTGCTTCTATGAAGGAAAAATGGACAAATGCTGGTGAAATA  350

seq1  TGGGAAAAGGCTGACCATTTATTCTTCAGTGTATTTAATGAAAAATGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAAGGCTGACCATTTATTCTTCAGTGTATTTAATGAAAAATGTGG  400

seq1  CAGTGTAAATAAGTACATTCAATTACTTCTTATGTACAACTGTATGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTAAATAAGTACATTCAATTACTTCTTATGTACAACTGTATGGAAG  450

seq1  ATTTTTAAAGGTGACAGATGCATTGTATTACCCAGATGTATCCTTTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAAGGTGACAGATGCATTGTATTACCCAGATGTATCCTTTTCTC  500

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  537
      |||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  537