BAC Information

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BAC

Clone NameB6Ng01-023O10
Chromosome7 (Build37)
Map Location 29,668,012 - 29,818,136
singlet/doubletdoublet
Overlap geneCapn12, Actn4, Eif3s12, Map4k1, Ryr1
Upstream genePrkcz2, 1700049G17Rik, EG668175, LOC100043771, Zfp780b, C130069I09Rik, LOC100043772, Psmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7
Downstream geneRasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27, Zfp74, LOC625437, LOC100043796, Zfp568
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023O10.bB6Ng01-023O10.g
ACCDH855693DH855694
length9231,105
definitionDH855693|Mus musculus domesticus DNA, BAC clone: B6Ng01-023O10, 5' end.DH855694|Mus musculus domesticus DNA, BAC clone: B6Ng01-023O10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,817,211 - 29,818,136)(29,668,012 - 29,669,114)
sequence
gaattccacctttttgccaaaagtagacgcttgtcatcctccagtctgtc
tctgtcacccagtgctggggctttcggcacatacagccatgcctggttgg
ttggtttgctttgttgtttgttcgtgctgttttgttttaaagatttaatt
atttattttatatgtgtggctgtttcctctgcactgtctgcgcacttatg
catgcagttgcttgtagaggccagaagagggcatcagcccccagaactga
gttacaggtggttatgagctgcccagtgtgggtgttgcagacaaaatcta
ggtcctccgtaagcaagaacagtgcatgttcttaactctctcagccactg
agccatcccgcactcctgctttcttcttttttctgtttactttttctttg
gtttctttctttcttttctttttttggaaatttgtctggaactttttacc
aagctggcttcaaatgcataaagatccgccttcttctgtggattaaattc
attaattaaaggcatgcatcaccatgcctggccccagcctctactttaag
ttttgttttgttttgttcctaagacaggatctcatgtggtccaggctggt
ctcaaacctgatttgcaacctcgaatgatgttgggcttctgatcctcgtg
tctcccaagccctgaggttacagacatgtctaataatacacatggttaac
gaggtgttgggggagtcaggccttgtacacgctactctctaagctacatc
gccagccctgcccagaccgtgttacagcgtgttttagagacagagagcct
ccccgcccatttctcaatgggcgaccgacattctgcttcatgcgtatatt
gtgttcgttcctattccctgtcgactgacactgctggtttctggtgcaac
ccatgctgcattgagggatgccg
gaattccagaacttgggaagcagaaggcaaaagcgggggttggaggtagg
aatcaggcagggtctggaagctgagccgctcctgccctgtgttttgtttt
gttttgttttgttttgttttgtttttcttcaccagctatggcagtttggc
cgctgggtggatgtggtggtagacgacaaactgcctgtgcgtgaggggaa
gctgatgttcgtgcgctcagaacaaaggaacgagttctgggcccctctgc
tggaaaaggcctatgccaagtaaggactccgccccctcccaaagccccag
ccctcccagctgcagccccaagaacatgcccaagccacgtggagtactga
catcacatcgggggtcctccagacacccaacctaggaccctgaacccagt
catagcccgccatagccctagtatcatggcactctcctggaagaaccttc
attttttggtattttattgagaaaagacctcatacaacctagcttgccca
ggaattagctatgtagccaaatgagaccttgaactgagggtcttgcctcc
atctcagaagtgctggggttccaggtgtgtgctaccaccccaggtttatg
cggtgctgggtttgaacccagggtctcatgtatgcttggtaagccctcta
ccaactgagctacatccccaacctttatccattcagttattgtcttgtta
tgtaggccaggttggcctcaaactcataatcctccttcactgggcccttg
tgtgcatagaatataggcatgcaccacaacccatggctaaagttaggaag
ggagtgtgtgtgagctgggggatggaacccacgatctgtgcatgctgagc
cacatcctagctcctcactggaggattctaggcaggggctctaccactgg
gtcacgtccccagcttctcactgggggaattctaggcaaggcctctacca
ctgagccacgtccccagcttcctcatttggggattctaggcaggggtcct
accacctgagcaccatccccagccccctcactgggggaatctaggcagga
actctacacctgagccagcctccagccctcactggggaaatctagacggg
gctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_29817211_29818136
seq2: B6Ng01-023O10.b_45_967 (reverse)

seq1  CGGCATCCCTCACTGCAGCATGGGTTGCACCAGGAACCAAGCAGTGTCCG  50
      |||||||||||| |||||||||||||||||||| |||| ||||||||| |
seq2  CGGCATCCCTCAATGCAGCATGGGTTGCACCAGAAACC-AGCAGTGTCAG  49

seq1  TCGACAGGGAATAGGGAACGAAACACAATATACGCATGAAGCAGAATGTC  100
      ||||||||||||| |||||| |||||||||||||||||||||||||||||
seq2  TCGACAGGGAATA-GGAACG-AACACAATATACGCATGAAGCAGAATGTC  97

seq1  GGTCGCCC-TTGGGAAATGGGCGGGGAGGCTCTCTTGTCTCTAAAACACG  149
      |||||||| ||| ||||||||||||||||||||| |||||||||||||||
seq2  GGTCGCCCATTGAGAAATGGGCGGGGAGGCTCTC-TGTCTCTAAAACACG  146

seq1  CTGTAACACGGTCTGGGCAGGGCTGGCGATGTAGCTTAGAGAGTAGCGTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACACGGTCTGGGCAGGGCTGGCGATGTAGCTTAGAGAGTAGCGTG  196

seq1  TACAAGGCCTGACTCCCCCAACACCTCGTTAACCATGTGTATTATTAGAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGCCTGACTCCCCCAACACCTCGTTAACCATGTGTATTATTAGAC  246

seq1  ATGTCTGTAACCTCAGGGCTTGGGAGACACGAGGATCAGAAGCCCAACAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGTAACCTCAGGGCTTGGGAGACACGAGGATCAGAAGCCCAACAT  296

seq1  CATTCGAGGTTGCAAATCAGGTTTGAGACCAGCCTGGACCACATGAGATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCGAGGTTGCAAATCAGGTTTGAGACCAGCCTGGACCACATGAGATC  346

seq1  CTGTCTTAGGAACAAAACAAAACAAAACTTAAAGTAGAGGCTGGGGCCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTAGGAACAAAACAAAACAAAACTTAAAGTAGAGGCTGGGGCCAG  396

seq1  GCATGGTGATGCATGCCTTTAATTAATGAATTTAATCCACAGAAGAAGGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTGATGCATGCCTTTAATTAATGAATTTAATCCACAGAAGAAGGC  446

seq1  GGATCTTTATGCATTTGAAGCCAGCTTGGTAAAAAGTTCCAGACAAATTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTATGCATTTGAAGCCAGCTTGGTAAAAAGTTCCAGACAAATTT  496

seq1  CCAAAAAAAGAAAAGAAAGAAAGAAACCAAAGAAAAAGTAAACAGAAAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAAAGAAAAGAAAGAAAGAAACCAAAGAAAAAGTAAACAGAAAAA  546

seq1  AGAAGAAAGCAGGAGTGCGGGATGGCTCAGTGGCTGAGAGAGTTAAGAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAGCAGGAGTGCGGGATGGCTCAGTGGCTGAGAGAGTTAAGAAC  596

seq1  ATGCACTGTTCTTGCTTACGGAGGACCTAGATTTTGTCTGCAACACCCAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTGTTCTTGCTTACGGAGGACCTAGATTTTGTCTGCAACACCCAC  646

seq1  ACTGGGCAGCTCATAACCACCTGTAACTCAGTTCTGGGGGCTGATGCCCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGCAGCTCATAACCACCTGTAACTCAGTTCTGGGGGCTGATGCCCT  696

seq1  CTTCTGGCCTCTACAAGCAACTGCATGCATAAGTGCGCAGACAGTGCAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGCCTCTACAAGCAACTGCATGCATAAGTGCGCAGACAGTGCAGA  746

seq1  GGAAACAGCCACACATATAAAATAAATAATTAAATCTTTAAAACAAAACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAGCCACACATATAAAATAAATAATTAAATCTTTAAAACAAAACA  796

seq1  GCACGAACAAACAACAAAGCAAACCAACCAACCAGGCATGGCTGTATGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGAACAAACAACAAAGCAAACCAACCAACCAGGCATGGCTGTATGTG  846

seq1  CCGAAAGCCCCAGCACTGGGTGACAGAGACAGACTGGAGGATGACAAGCG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAAGCCCCAGCACTGGGTGACAGAGACAGACTGGAGGATGACAAGCG  896

seq1  TCTACTTTTGGCAAAAAGGTGGAATTC  926
      |||||||||||||||||||||||||||
seq2  TCTACTTTTGGCAAAAAGGTGGAATTC  923

seq1: chr7_29668012_29669114
seq2: B6Ng01-023O10.g_71_1175

seq1  GAATTCCAGAACTTGGGAAGCAGAAGGCAAAAGCGGGGGTTGGAGGTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAACTTGGGAAGCAGAAGGCAAAAGCGGGGGTTGGAGGTAGG  50

seq1  AATCAGGCAGGGTCTGGAAGCTGAGCCGCTCCTGCCCTGTGTTTTGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGCAGGGTCTGGAAGCTGAGCCGCTCCTGCCCTGTGTTTTGTTTT  100

seq1  GTTTTGTTTTGTTTTGTTTTGTTTTTCTTCACCAGCTATGGCAGTTTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTGTTTTGTTTTGTTTTTCTTCACCAGCTATGGCAGTTTGGC  150

seq1  CGCTGGGTGGATGTGGTGGTAGACGACAAACTGCCTGTGCGTGAGGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGGGTGGATGTGGTGGTAGACGACAAACTGCCTGTGCGTGAGGGGAA  200

seq1  GCTGATGTTCGTGCGCTCAGAACAAAGGAACGAGTTCTGGGCCCCTCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGTTCGTGCGCTCAGAACAAAGGAACGAGTTCTGGGCCCCTCTGC  250

seq1  TGGAAAAGGCCTATGCCAAGTAAGGACTCCGCCCCCTCCCAAAGCCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGGCCTATGCCAAGTAAGGACTCCGCCCCCTCCCAAAGCCCCAG  300

seq1  CCCTCCCAGCTGCAGCCCCAAGAACATGCCCAAGCCACGTGGAGTACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCAGCTGCAGCCCCAAGAACATGCCCAAGCCACGTGGAGTACTGA  350

seq1  CATCACATCGGGGGTCCTCCAGACACCCAACCTAGGACCCTGAACCCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACATCGGGGGTCCTCCAGACACCCAACCTAGGACCCTGAACCCAGT  400

seq1  CATAGCCCGCCATAGCCCTAGTATCATGGCACTCTCCTGGAAGAACCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCCCGCCATAGCCCTAGTATCATGGCACTCTCCTGGAAGAACCTTC  450

seq1  ATTTTTTGGTATTTTATTGAGAAAAGACCTCATACAACCTAGCTTGCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGGTATTTTATTGAGAAAAGACCTCATACAACCTAGCTTGCCCA  500

seq1  GGAATTAGCTATGTAGCCAAATGAGACCTTGAACTGAGGGTCTTGCCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTAGCTATGTAGCCAAATGAGACCTTGAACTGAGGGTCTTGCCTCC  550

seq1  ATCTCAGAAGTGCTGGGGTTCCAGGTGTGTGCTACCACCCCAGGTTTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGAAGTGCTGGGGTTCCAGGTGTGTGCTACCACCCCAGGTTTATG  600

seq1  CGGTGCTGGGTTTGAACCCAGGGTCTCATGTATGCTTGGTAAGCCCTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGCTGGGTTTGAACCCAGGGTCTCATGTATGCTTGGTAAGCCCTCTA  650

seq1  CCAACTGAGCTACATCCCCAACCTTTATCCATTCAGTTATTGTCTTGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGAGCTACATCCCCAACCTTTATCCATTCAGTTATTGTCTTGTTA  700

seq1  TGTAGGCCAGGTTGGCCTCAAACTCATAATCCTCCTTCACTGGGCCCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGCCAGGTTGGCCTCAAACTCATAATCCTCCTTCACTGGGCCCTTG  750

seq1  TGTGCATAGAATATAGGCATGCACCACAACCCATGGCTAAAGTTAGGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATAGAATATAGGCATGCACCACAACCCATGGCTAAAGTTAGGAAG  800

seq1  GGAGTGTGTGTGAGCT-GGGGATGGAACCCACGATCTGTGCATGCTGAGC  849
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGAGTGTGTGTGAGCTGGGGGATGGAACCCACGATCTGTGCATGCTGAGC  850

seq1  CACATCCCAGCTCCTCACTGGAGGATTCTAGGCAGGGGCTCTACCACTGG  899
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCCTAGCTCCTCACTGGAGGATTCTAGGCAGGGGCTCTACCACTGG  900

seq1  GCCACGCCCCCAGCTCCTCACTGGGGG-ATTCTAGGCAGGGGCTCTACCA  948
      | |||| |||||||| ||||||||||| |||||||||| || ||||||||
seq2  GTCACGTCCCCAGCTTCTCACTGGGGGAATTCTAGGCAAGGCCTCTACCA  950

seq1  CTGAGCCACGCCCCCAGC-TCCTCACTTGGGGATTCTAGGCAGGGGCTCT  997
      |||||||||| ||||||| |||||| ||||||||||||||||||||  ||
seq2  CTGAGCCACGTCCCCAGCTTCCTCATTTGGGGATTCTAGGCAGGGGTCCT  1000

seq1  ACCA-CTGAGCCACACCCCCAG-CCCCTCACTGGGGGATTCTAGGCAGGG  1045
      |||| ||||||  || |||||| ||||||||||||||| |||||||||| 
seq2  ACCACCTGAGCACCATCCCCAGCCCCCTCACTGGGGGAATCTAGGCAGGA  1050

seq1  ACTCTACCACTGAGCCACGCCCCCAGCCCCTCACTGGGGGAGTCTAGGCA  1095
      |||||||  |||||||| ||| |||| |||||||||||| | ||||| | 
seq2  ACTCTACACCTGAGCCA-GCCTCCAG-CCCTCACTGGGGAAATCTAGAC-  1097

seq1  GGGGCTCT  1103
      ||||||||
seq2  GGGGCTCT  1105