BAC Information

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BAC

Clone NameB6Ng01-024P19
Chromosome7 (Build37)
Map Location 112,274,223 - 112,421,895
singlet/doubletdoublet
Overlap geneOlfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035
Upstream gene4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681
Downstream geneOlfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024P19.bB6Ng01-024P19.g
ACCDH856462DH856463
length1,0801,225
definitionDH856462|Mus musculus domesticus DNA, BAC clone: B6Ng01-024P19, 5' end.DH856463|Mus musculus domesticus DNA, BAC clone: B6Ng01-024P19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,420,817 - 112,421,895)(112,274,223 - 112,275,453)
sequence
gaattcattatgatttacatttaatacaaccttaaaacaatctgtctttg
acattatgtattttttatcaaatataaaacaataatctttggaatttatt
gttattgtttgggcaaactgtatatagactttactacaggtcaccttgtc
tgtcactcactgctcagtctagacttaagcatcatttctcttttgtttcc
tgattacagtacccagtccttatctaagtgaattgctgagagatgtcaag
tattgaagataatggattttaaaaacaaaagaaaagataaagacaggatt
taaaaggaaaggaaagaaaaggaaaggaaaaagaaaaccagttgtggcag
ccagtgatgaggtgtgtagtcagagactaggactgaactacagggtaggg
actctgctgcctcagcactcagggatcaggactggattataaggcaggga
ctctgtcctttcccctctgaacctgcgggcttgcttacctcttcaggagt
gtgtgacgaggctcctgttacagggccctgcagcaacctctgcttcccat
gctactgtacctgtgctcagcccaccatcccgaacacatcccttctctta
ttcctcacacctgagggtttagtataactccccaagttggctgtttctga
gatgatgattcttgggccctccttactctattctcaagagctcaatgctt
cccggggttgtcatgggaataagactgaagtgctttctggcaagtagctc
cggtcccaggagcagcctaagagactacttttcattccggattccccagg
gcattaatctactccagtctcatcaatctctctcgcagttatagggagat
tgaaaacgttaagttcatcattatccctgccctgacgggtgatccttttg
ttgtaatttttctgttccagctgttgtttgactggtaagtagaaaacact
ttaaagtaaagcttgactttttttttcttttttggtcatgtgatctgtgc
aaagcgggacaaactgaattatcttcctagaattacttctttcattgaac
tcttggatgctgagggaaggtgaacatcat
gaattctccttgaatgaaatggacattgttcccatcaatgatctagtgac
ataattatctaaacacagactgagtcttcagcatttctgagataagtact
tatctcctgaggactatctcgttagactaaggaggaaatgtctactcact
ttattgattctctacagatcttgtgactcataacttcaattttcactcac
tgccttggtccagattgtttagcaatcatttttttaacctagagtattaa
aagaaaccttactggtttcaccaatactattcatatgccccatgtccttt
tcaaagtgtcccttcattactgtcctataagttataatgcctaattagaa
cataaagtttgaaaaacacacagaaggtgataaattcatatttaatggct
gcattattgacacatcgtgatcaaatacagtcagaatgaagaatataata
tatccctaaaggttgatttagcatatatcatagaggaaagtggaaataaa
cttgtaacagtaattctgaagttgtaaattcaagatgaatgtagtgacat
gcacatattttgtctattgtattattcacatcaaaccaacaataaaataa
atccagattttcacaatcccctctacaaagtccttctttggctcatgtat
ctcagaactagtgtttgaatagcttgataatcccctgcttgatttcctgg
gttcgtactccatacacaatgggattgagggcaggtgggatgagatgatg
cagcacattaagaagaattggtacctctgacggtatcttctttcctgcct
tgttttgtgaagataaagactagcaacaaagtataagaagagtataagga
tgagatgtgaaccacaagtactcaaggccttggtgacagtgcctccagac
tgctgacacataacaacctcaagatgaagcagtagagagcaaatgaggac
cagatcagaaccagtaggcaccaaacgctcacaattgatagagcttattt
aggcgtattgtccccacaggaagcttgctacgaaatattggtcactattg
cagtttctccaccacatttgctgcacagtatggagtctagcaagcagaac
tggagtgtggcagtgtaatctagatgaattgcggcacattataatgctgc
attaattggacaactgttctgtatatggattggtagcgttaggatagcga
tataggcccatagcgatcatgaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_112420817_112421895
seq2: B6Ng01-024P19.b_39_1119 (reverse)

seq1  ATGATGTTCACCTTCCCTCAGCATCCAAGAGTTCGATG-AAGGAGTAA-T  48
      |||||||||||||||||||||||||||||||||| ||| ||| ||||| |
seq2  ATGATGTTCACCTTCCCTCAGCATCCAAGAGTTCAATGAAAGAAGTAATT  50

seq1  CTAGGAAGATAATTCAGTTTGTCCCGCTTTGCACAAGATCACATGACCAA  98
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTAGGAAGATAATTCAGTTTGTCCCGCTTTGCAC-AGATCACATGACCAA  99

seq1  AAAAG-AAAAAAAAGTCAAGCTTTACTTTAAAGTGTTTTTCTACTTACCA  147
      ||||| ||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAAAGAAAAAAAAAGTCAAGCTTTACTTTAAAGTG-TTTTCTACTTACCA  148

seq1  GTTCATACAACAGCTGGAACAGAAAAATTACAAC-AAAGGATCACCCGTC  196
      | ||| |||||||||||||||||||||||||||| |||||||||||||||
seq2  G-TCAAACAACAGCTGGAACAGAAAAATTACAACAAAAGGATCACCCGTC  197

seq1  AGGGCAGGGATAATGATGAACTTAACGTTTTCAATCTCCCTATAACTGCG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGGGATAATGATGAACTTAACGTTTTCAATCTCCCTATAACTGCG  247

seq1  AGAGAGATTGATGAGACTGGAGTAGATTAATGCCCTGGGGAATCCGGAAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGATTGATGAGACTGGAGTAGATTAATGCCCTGGGGAATCCGGAAT  297

seq1  GAAAAGTAGTCTCTTAGGCTGCTCCTGGGACCGGAGCTACTTGCCAGAAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTAGTCTCTTAGGCTGCTCCTGGGACCGGAGCTACTTGCCAGAAA  347

seq1  GCACTTCAGTCTTATTCCCATGACAACCCCGGGAAGCATTGAGCTCTTGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCAGTCTTATTCCCATGACAACCCCGGGAAGCATTGAGCTCTTGA  397

seq1  GAATAGAGTAAGGAGGGCCCAAGAATCATCATCTCAGAAACAGCCAACTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGAGTAAGGAGGGCCCAAGAATCATCATCTCAGAAACAGCCAACTT  447

seq1  GGGGAGTTATACTAAACCCTCAGGTGTGAGGAATAAGAGAAGGGATGTGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGTTATACTAAACCCTCAGGTGTGAGGAATAAGAGAAGGGATGTGT  497

seq1  TCGGGATGGTGGGCTGAGCACAGGTACAGTAGCATGGGAAGCAGAGGTTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGATGGTGGGCTGAGCACAGGTACAGTAGCATGGGAAGCAGAGGTTG  547

seq1  CTGCAGGGCCCTGTAACAGGAGCCTCGTCACACACTCCTGAAGAGGTAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGGGCCCTGTAACAGGAGCCTCGTCACACACTCCTGAAGAGGTAAG  597

seq1  CAAGCCCGCAGGTTCAGAGGGGAAAGGACAGAGTCCCTGCCTTATAATCC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCGCAGGTTCAGAGGGGAAAGGACAGAGTCCCTGCCTTATAATCC  647

seq1  AGTCCTGATCCCTGAGTGCTGAGGCAGCAGAGTCCCTACCCTGTAGTTCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGATCCCTGAGTGCTGAGGCAGCAGAGTCCCTACCCTGTAGTTCA  697

seq1  GTCCTAGTCTCTGACTACACACCTCATCACTGGCTGCCACAACTGGTTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAGTCTCTGACTACACACCTCATCACTGGCTGCCACAACTGGTTTT  747

seq1  CTTTTTCCTTTCCTTTTCTTTCCTTTCCTTTTAAATCCTGTCTTTATCTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCCTTTCCTTTTCTTTCCTTTCCTTTTAAATCCTGTCTTTATCTT  797

seq1  TTCTTTTGTTTTTAAAATCCATTATCTTCAATACTTGACATCTCTCAGCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGTTTTTAAAATCCATTATCTTCAATACTTGACATCTCTCAGCA  847

seq1  ATTCACTTAGATAAGGACTGGGTACTGTAATCAGGAAACAAAAGAGAAAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTTAGATAAGGACTGGGTACTGTAATCAGGAAACAAAAGAGAAAT  897

seq1  GATGCTTAAGTCTAGACTGAGCAGTGAGTGACAGACAAGGTGACCTGTAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTAAGTCTAGACTGAGCAGTGAGTGACAGACAAGGTGACCTGTAG  947

seq1  TAAAGTCTATATACAGTTTGCCCAAACAATAACAATAAATTCCAAAGATT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTCTATATACAGTTTGCCCAAACAATAACAATAAATTCCAAAGATT  997

seq1  ATTGTTTTATATTTGATAAAAAATACATAATGTCAAAGACAGATTGTTTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTATATTTGATAAAAAATACATAATGTCAAAGACAGATTGTTTT  1047

seq1  AA-TTTGTATTAAATGTAAATCATAATGAATTCC  1079
      ||  ||||||||||||||||||||||||||||||
seq2  AAGGTTGTATTAAATGTAAATCATAATGAATTCC  1081

seq1: chr7_112274223_112275453
seq2: B6Ng01-024P19.g_69_1293

seq1  GAATTCTCCTTGAATGAAATGGACATTGTTCCCATCAATGATCTAGTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTGAATGAAATGGACATTGTTCCCATCAATGATCTAGTGAC  50

seq1  ATAATTATCTAAACACAGACTGAGTCTTCAGCATTTCTGAGATAAGTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATCTAAACACAGACTGAGTCTTCAGCATTTCTGAGATAAGTACT  100

seq1  TATCTCCTGAGGACTATCTCGTTAGACTAAGGAGGAAATGTCTACTCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCTGAGGACTATCTCGTTAGACTAAGGAGGAAATGTCTACTCACT  150

seq1  TTATTGATTCTCTACAGATCTTGTGACTCATAACTTCAATTTTCACTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGATTCTCTACAGATCTTGTGACTCATAACTTCAATTTTCACTCAC  200

seq1  TGCCTTGGTCCAGATTGTTTAGCAATCATTTTTTTAACCTAGAGTATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGGTCCAGATTGTTTAGCAATCATTTTTTTAACCTAGAGTATTAA  250

seq1  AAGAAACCTTACTGGTTTCACCAATACTATTCATATGCCCCATGTCCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACCTTACTGGTTTCACCAATACTATTCATATGCCCCATGTCCTTT  300

seq1  TCAAAGTGTCCCTTCATTACTGTCCTATAAGTTATAATGCCTAATTAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTGTCCCTTCATTACTGTCCTATAAGTTATAATGCCTAATTAGAA  350

seq1  CATAAAGTTTGAAAAACACACAGAAGGTGATAAATTCATATTTAATGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGTTTGAAAAACACACAGAAGGTGATAAATTCATATTTAATGGCT  400

seq1  GCATTATTGACACATCGTGATCAAATACAGTCAGAATGAAGAATATAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATTGACACATCGTGATCAAATACAGTCAGAATGAAGAATATAATA  450

seq1  TATCCCTAAAGGTTGATTTAGCATATATCATAGAGGAAAGTGGAAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCTAAAGGTTGATTTAGCATATATCATAGAGGAAAGTGGAAATAAA  500

seq1  CTTGTAACAGTAATTCTGAAGTTGTAAATTCAAGATGAATGTAGTGACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAACAGTAATTCTGAAGTTGTAAATTCAAGATGAATGTAGTGACAT  550

seq1  GCACATATTTTGTCTATTGTATTATTCACATCAAACCAACAATAAAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATATTTTGTCTATTGTATTATTCACATCAAACCAACAATAAAATAA  600

seq1  ATCCAGATTTTCACAATCCCCTCTACAAAGTCCTTCTTTGGCTCATGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGATTTTCACAATCCCCTCTACAAAGTCCTTCTTTGGCTCATGTAT  650

seq1  CTCAGAACTAGTGTTTGAATAGCTTGATAATCCCCTGCTTGATTTCCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAACTAGTGTTTGAATAGCTTGATAATCCCCTGCTTGATTTCCTGG  700

seq1  GTTCGTACTCCATACACAATGGGATTGAGGGCAGGTGGGATGAGATGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGTACTCCATACACAATGGGATTGAGGGCAGGTGGGATGAGATGATG  750

seq1  CAGCACATTAAGAAGAATTGGTACCTCTGACGGTATCTTCTTTCCTGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACATTAAGAAGAATTGGTACCTCTGACGGTATCTTCTTTCCTGCCT  800

seq1  TG-TTTGTGAAGATAAAGACTAGCAACAAAGTATAAGAAGAGTATAAGGA  849
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTGAAGATAAAGACTAGCAACAAAGTATAAGAAGAGTATAAGGA  850

seq1  TGAGATGTGAACCACAAGTACTCAAGGCCTTGGTGACAGTGCCTCCAGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGTGAACCACAAGTACTCAAGGCCTTGGTGACAGTGCCTCCAGAC  900

seq1  TGCTGACACATAACAACCCTCAAGATGAAGCAGTAAGAGAGCAAAATGAG  949
      |||||||||||||||| ||||||||||||||||| ||||||| |||||||
seq2  TGCTGACACATAACAA-CCTCAAGATGAAGCAGT-AGAGAGC-AAATGAG  947

seq1  GACCAGATCAGAACCAAGTAGGCACCAAACGCTCACAAATTGATAGAGCT  999
      ||||||||||||||| |||||||||||||||||||| |||||||||||||
seq2  GACCAGATCAGAACC-AGTAGGCACCAAACGCTCAC-AATTGATAGAGCT  995

seq1  TATTTAGGCG-AATGTCCCCACAGGAAAGCTTTGCTACAGAAATATTGG-  1047
      |||||||||| | |||||||||||| |||| ||||||| |||||||||| 
seq2  TATTTAGGCGTATTGTCCCCACAGG-AAGC-TTGCTAC-GAAATATTGGT  1042

seq1  CACATATGCAG-TTCTCCACCACA-TTGCTGGCACAGTAATTGAGTCTAG  1095
      |||   ||||| |||||||||||| ||||| ||||||| || ||||||||
seq2  CACTATTGCAGTTTCTCCACCACATTTGCT-GCACAGT-ATGGAGTCTAG  1090

seq1  CAGCCAGAACTGGAGTG-GGCAGTGT-AGCTAGAAG-ATTGCGGGCAACA  1142
      ||  ||||||||||||| |||||||| | ||||| | |||||||   |||
seq2  CAAGCAGAACTGGAGTGTGGCAGTGTAATCTAGATGAATTGCGG--CACA  1138

seq1  ATAAAAATGGCTGCATTAAT--GACAAACTGTTCTGTGATGATGGATGGG  1190
       || ||   |||||||||||  ||| ||||||||||| || |||||| ||
seq2  TTATAA--TGCTGCATTAATTGGAC-AACTGTTCTGT-AT-ATGGATTGG  1183

seq1  TAGCGCAGAGGATGGC-AGATAGCCACATAGCGATCAT-AGGC  1231
      |||||   ||||| || | |||| | |||||||||||| ||||
seq2  TAGCG-TTAGGATAGCGATATAGGCCCATAGCGATCATGAGGC  1225