BAC Information

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BAC

Clone NameB6Ng01-025K13
Chromosome7 (Build37)
Map Location 24,433,672 - 24,434,718
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667530, LOC667536, EG667543, LOC100043645, EG667551, LOC100043650, LOC100043067, LOC100043069, LOC670857, LOC620758, EG667570, LOC100043658, LOC100043079, LOC100043083, EG667586, EG667599, LOC100043086, LOC100043665, LOC667616, LOC100043667, LOC667623, LOC100043088, EG628664, Nlrp4e, LOC434261, Nlrp5, LOC100043095, EG622032, LOC667651, LOC100043101, LOC100043103, EG546944, V1rd7
Downstream geneV1rd9, EG545934, V1rd22, LOC384573, EG622222, LOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235, Zfp114, Zfp111, Zfp109, Zfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025K13.bB6Ng01-025K13.g
ACCDH856940DH856941
length1,0331,149
definitionDH856940|Mus musculus domesticus DNA, BAC clone: B6Ng01-025K13, 5' end.DH856941|Mus musculus domesticus DNA, BAC clone: B6Ng01-025K13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgtaaaatttcatttctaaaagagttattattattactttact
cgttgttttgtttgttatctcttcatagttttactatcattatttcacaa
tttattttcctattttcattacatcctattcacagcctacctcctctgct
tccagtcttgatcttactaattcctgccctcattacccaccttcccttct
cctgggagaaggggaagctcctgttgggtaccacactgcctttgaaaatc
tagtaccaaaaggattaagcaccacctctcccactgaggtctaattaggc
agaaaaagtaggggaagggggtcctttcttaagctaagcttgttgccact
agctcataattcagttatctcatttatgctaattgaagttctgccactta
gcaggttacctataatcagttttatacatcagatttccttcctgtctgtg
tggcaaatctccctacacctgactctttccaagacatcctctctctgacc
agaagtcccaccttacaaatctcctatttgctatgggctataggcattac
cttttaaccaatttatttcaaccctgccttagacagaaaatgaaagacag
agacacatcatcacacagtgtacaaaaatattatccctaaaagctgtgat
aaactgaaatggagagaagaaattttcccttctgcattgttcagctttca
tgtgtatgtgagctttttgttgttttttttgttactgaagaccagcctta
gtccatggtgatctgataggatgcatgggattatttcaattttctagtat
ctgttggggcctgttttgttaccaattatatgatcaatttgggagaaggt
accatgaggtgctgagaagaaggtatattctttgttttaggatgaaatgt
cctatagtatctgctaaaactattggtcataactctgtagtttcactggt
gttctgttagtttattcatgattaatccatgccgaatatggggatgttaa
gatccgctgttatttccggggtgaaatgtgctt
gaattctcacctgaggaataacaaatggcttagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatccaaacaaccctgagat
tccacctcacaccagtgagaatggctgagataaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcagtacctcttctgggc
aaatattcagaagatgttccaactggtaataaggacacatgctccacttg
ttcatatcagtcttatttataatatccagaagctggaaagaacccagatg
tccctaaacagagaaatggatacagaaaatatgatacatttacacaatgg
agtactactcagctattaaaataaatgagtttatgaaatttctaggcaaa
tggatggacctggagggcatatcctgagtgaggtaacccaatcacaaaag
aactcacatgatatgtactcactgataaatgggtattagcccagaaactt
agaatacccaagatacaagttgcaaaacacatgaaactcaagaagaatga
agaccaaagtgtggactctttgccccttctcagaattgagaacaaaacac
ccatggaaggagttacagagacaaagtttggagctgagaccaaaggatgg
accatctagagactgccacatcccgggatccatcctataatcagcctcca
aacactgacaccattgcatatgtcagcaagatttttctgaaagcaccctg
atgttgctgtctcttgtgaggctatgatggtgcctggcaaacacagacgt
ggatgctcaggtcagctatggatggatcacaggaccccaatggaggagct
agagaagtaccaagagctgatgggtcagcaccctataggtgaacaacaat
atactacagtacccagagctcatgtctctagctgcatttgtagcagaaga
atgctagtcgcatcattggaagagagacctttgggctgcacctttaatgc
tcagtataaggaacccggtcagattgggaggtgggtggggtacagttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_24433672_24434718
seq2: B6Ng01-025K13.b_33_1065

seq1  GAATTCATGTAAAATTTCATTTCTAAAAGAGTTATTATTATTACTTTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTAAAATTTCATTTCTAAAAGAGTTATTATTATTACTTTACT  50

seq1  CGTTGTTTTGTTTGTTATCTCTTCATAGTTTTACTATCATTATTTCACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGTTTTGTTTGTTATCTCTTCATAGTTTTACTATCATTATTTCACAA  100

seq1  TTTATTTTCCTATTTTCATTACATCCTATTCACAGCCTACCTCCTCTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTCCTATTTTCATTACATCCTATTCACAGCCTACCTCCTCTGCT  150

seq1  TCCAGTCTTGATCTTACTAATTCCTGCCCTCATTACCCACCTTCCCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCTTGATCTTACTAATTCCTGCCCTCATTACCCACCTTCCCTTCT  200

seq1  CCTGGGAGAAGGGGAAGCTCCTGTTGGGTACCACACTGCCTTTGAAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAGAAGGGGAAGCTCCTGTTGGGTACCACACTGCCTTTGAAAATC  250

seq1  TAGTACCAAAAGGATTAAGCACCACCTCTCCCACTGAGGTCTAATTAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACCAAAAGGATTAAGCACCACCTCTCCCACTGAGGTCTAATTAGGC  300

seq1  AGAAAAAGTAGGGGAAGGGGGTCCTTTCTTAAGCTAAGCTTGTTGCCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGTAGGGGAAGGGGGTCCTTTCTTAAGCTAAGCTTGTTGCCACT  350

seq1  AGCTCATAATTCAGTTATCTCATTTATGCTAATTGAAGTTCTGCCACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATAATTCAGTTATCTCATTTATGCTAATTGAAGTTCTGCCACTTA  400

seq1  GCAGGTTACCTATAATCAGTTTTATACATCAGATTTCCTTCCTGTCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTTACCTATAATCAGTTTTATACATCAGATTTCCTTCCTGTCTGTG  450

seq1  TGGCAAATCTCCCTACACCTGACTCTTTCCAAGACATCCTCTCTCTGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAATCTCCCTACACCTGACTCTTTCCAAGACATCCTCTCTCTGACC  500

seq1  AGAAGTCCCACCTTACAAATCTCCTATTTGCTATGGGCTATAGGCATTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCCCACCTTACAAATCTCCTATTTGCTATGGGCTATAGGCATTAC  550

seq1  CTTTTAACCAATTTATTTCAACCCTGCCTTAGACAGAAAATGAAAGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAACCAATTTATTTCAACCCTGCCTTAGACAGAAAATGAAAGACAG  600

seq1  AGACACATCATCACACAGTGTACAAAAATATTATCCCTAAAAGCTGTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACATCATCACACAGTGTACAAAAATATTATCCCTAAAAGCTGTGAT  650

seq1  AAACTGAAATGGAGAGAAGAAATTTTCCCTTCTGCATTGTTCAGCTTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAAATGGAGAGAAGAAATTTTCCCTTCTGCATTGTTCAGCTTTCA  700

seq1  TGTGTATGTGAGCTTTTTGTTG-TTTTTTTGTTACTGAAGACCAGCCTTA  749
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGTGTATGTGAGCTTTTTGTTGTTTTTTTTGTTACTGAAGACCAGCCTTA  750

seq1  GTCCATGGTGATCTGATAGGATGCATGGGATTATTTCAATTTTCTAGTAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATGGTGATCTGATAGGATGCATGGGATTATTTCAATTTTCTAGTAT  800

seq1  CTGTTGGGGCCTGTTTTGTTACCAATTATATGATCAATTTTGGAGAAGGT  849
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTGTTGGGGCCTGTTTTGTTACCAATTATATGATCAATTTGGGAGAAGGT  850

seq1  ACCATGAGGTGCTGAGAAGAAGGTATATTCTTTTGTTTTAGGATGAAATG  899
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACCATGAGGTGCTGAGAAGAAGGTATATTC-TTTGTTTTAGGATGAAATG  899

seq1  TCCTATAGGTATCTGCTAAAACTATTTGGTTCATAACTTCTGTTAGTTTC  949
      ||||||| ||||||||||||||||||  | ||||||| |||| |||||||
seq2  TCCTATA-GTATCTGCTAAAACTATT--GGTCATAAC-TCTG-TAGTTTC  944

seq1  ACT-GTGTCTCTGTTTAGTTTATTTCCATGATCAATCCATTGCTGAGAGT  998
      ||| |||| |||| ||||||||||  |||||| |||||||  |  | |  
seq2  ACTGGTGT-TCTG-TTAGTTTATT--CATGATTAATCCATGCCGAATATG  990

seq1  GGGATGTTAAAGACTCCCGCTGTTATTTTCCGGGGTGTGACATGTGCTT  1047
      |||||||| ||||   ||||||||| ||||||||  |||| ||||||||
seq2  GGGATGTT-AAGA--TCCGCTGTTA-TTTCCGGG--GTGAAATGTGCTT  1033