BAC Information

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BAC

Clone NameB6Ng01-026H20
Chromosome7 (Build37)
Map Location 70,194,881 - 70,365,747
singlet/doubletdoublet
Overlap geneChrna7
Upstream geneNdn, Magel2, Mkrn3, Peg12, Atp5l-ps1, EG665038, LOC669222, LOC384631, LOC622243, EG622251
Downstream geneOtud7a, LOC545971, LOC100041386, LOC665083, Klf13, E030018B13Rik, Trpm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026H20.bB6Ng01-026H20.g
ACCDH857518DH857519
length1,176936
definitionDH857518|Mus musculus domesticus DNA, BAC clone: B6Ng01-026H20, 5' end.DH857519|Mus musculus domesticus DNA, BAC clone: B6Ng01-026H20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,194,881 - 70,196,072)(70,364,800 - 70,365,747)
sequence
gaattcactatctatctattaccatacgtcctgccattagcaagtagctg
gtaactagaacaatagaatgaacctctgagagtgcagttacagtaagaat
tattatggtgccaaagagggctagagcaaagttctaattggaggctggga
gatgtatgccagaaatcaacaactgcctcctctgcccctccccccaaact
gaagtggcattgattcagctaaagagataaacaggcaagctagaggccag
agaaggaagtggctaagaaggaggaatactcttgaagaaataaggggttc
ttaaagatgaagtaaagccaagggcaatttcaatccagggatggtcctac
tcatagaaagtactgagaagactctacatgtgcatctctggcattctttc
ggcatggagtttgttctatgcagtttgctctatgcaagctaaggctgaat
ttcaggtagcctttcccataaattactggtaacccttttcaatgatgtct
tgagaagcaatttgaagaaatggatgaacaaagacatacaaggcacatag
gaattagatggataaatggctagagtactcttagcagtaatcactttaaa
tgtaaataggataaacttttcaattaaataatagagactgacagaacaat
ttgtattttttaatagcccaacaaggttctatctataaaaccctcacttc
ttatatagtataaaatagtagaaactgtttaattaatgcagatagctctt
tcaaataataaccaatgaagctaaggtgactctgaaaatcagtaagacag
gcttttagtgaaagtttgttacaggagccaccacagtttatatcaaatac
tgagaagtgtgtcaattcgtaagggagatatgatgattataagaacatag
ataactaagagagaaccttaaaatactaaaacttacataattaaagaaag
aatacataattaaagtcactctacaaaggtaggctttgaactgcttttct
agaacaacagaaacatactatcatgggttctgaacactaaagccaaagtc
aaaatggcacaggacatgcgcctgtccaaagcactggagtgacctctcgt
tgccccttgctgtagtaaagggcgatctctctggcactataggcatggtg
aatgttagagatacatctagccagag
gaattcactgtgaagaggagaagagggactcgggagttgagtctgaacag
gtaagggctcctggaagctggtgggggataggcatcactctccttcacag
ctttcacgaatcatcagaaaacttcatattgatagatgagaaaagaaaaa
ttgggctagagtggcttaggacttaagagtactctgctggtgcagaggga
ccaggttcagtctcacgaacttacgtgatgactcataaccatctgtaacg
ctacttctgggaaatttggtgatgcttctggcctccaaggataccaggtg
tgtatgtaacgaacgtgcaggccaaacgctcatgaatataaaaatagatc
ttttctttaaaacaaagatatagccagtattatcataatagatgcttacc
aacgatctattttcactgatttctaaaaagcataaaaatttctatctgaa
atagaagaaaaggaaagtttcttttaaaatcgaaaacatttgtgtggtgt
ctgtacatgtgcccatagatgtgtgcacatgtgtagcaggaacgttaggg
gttcctctatgtaaaatctgggggctgcacagccacaaaagcatctcctg
caggaggacctaattgaggactgcctgagagaccaagaattgctgatgca
gacaatgccagccaatcgggaactgctgtttagaagagatgctttcttgg
gactaatggggcatgggtggagggtaataaaggagcttgcagtgttcaga
gaacttgctgcactgtttctcacctgctccccgagtctgtgtcattgact
ctgtgccacctcacctccaaccccctgcaggtagggtcagcaacaaatgt
gtgagtgtgtgctgtgcatgtacgtgtagtgtgtgtgttcatgagggaag
tgatgtcgcattttttttgggtacttctactttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_70194881_70196072
seq2: B6Ng01-026H20.b_49_1224

seq1  GAATTCACTATCTATCTATTACCATACGTCCTGCCATTAGCAAGTAGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATCTATCTATTACCATACGTCCTGCCATTAGCAAGTAGCTG  50

seq1  GTAACTAGAACAATAGAATGAACCTCTGAGAGTGCAGTTACAGTAAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTAGAACAATAGAATGAACCTCTGAGAGTGCAGTTACAGTAAGAAT  100

seq1  TATTATGGTGCCAAAGAGGGCTAGAGCAAAGTTCTAATTGGAGGCTGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGGTGCCAAAGAGGGCTAGAGCAAAGTTCTAATTGGAGGCTGGGA  150

seq1  GATGTATGCCAGAAATCAACAACTGCCTCCTCTGCCCCTCCCCCCAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATGCCAGAAATCAACAACTGCCTCCTCTGCCCCTCCCCCCAAACT  200

seq1  GAAGTGGCATTGATTCAGCTAAAGAGATAAACAGGCAAGCTAGAGGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGCATTGATTCAGCTAAAGAGATAAACAGGCAAGCTAGAGGCCAG  250

seq1  AGAAGGAAGTGGCTAAGAAGGAGGAATACTCTTGAAGAAATAAGGGGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAAGTGGCTAAGAAGGAGGAATACTCTTGAAGAAATAAGGGGTTC  300

seq1  TTAAAGATGAAGTAAAGCCAAGGGCAATTTCAATCCAGGGATGGTCCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATGAAGTAAAGCCAAGGGCAATTTCAATCCAGGGATGGTCCTAC  350

seq1  TCATAGAAAGTACTGAGAAGACTCTACATGTGCATCTCTGGCATTCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAAAGTACTGAGAAGACTCTACATGTGCATCTCTGGCATTCTTTC  400

seq1  GGCATGGAGTTTGTTCTATGCAGTTTGCTCTATGCAAGCTAAGGCTGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGAGTTTGTTCTATGCAGTTTGCTCTATGCAAGCTAAGGCTGAAT  450

seq1  TTCAGGTAGCCTTTCCCATAAATTACTGGTAACCCTTTTCAATGATGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTAGCCTTTCCCATAAATTACTGGTAACCCTTTTCAATGATGTCT  500

seq1  TGAGAAGCAATTTGAAGAAATGGATGAACAAAGACATACAAGGCACATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGCAATTTGAAGAAATGGATGAACAAAGACATACAAGGCACATAG  550

seq1  GAATTAGATGGATAAATGGCTAGAGTACTCTTAGCAGTAATCACTTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGATGGATAAATGGCTAGAGTACTCTTAGCAGTAATCACTTTAAA  600

seq1  TGTAAATAGGATAAACTTTTCAATTAAATAATAGAGACTGACAGAACAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATAGGATAAACTTTTCAATTAAATAATAGAGACTGACAGAACAAT  650

seq1  TTGTATTTTTTAATAGCCCAACAAGGTTCTATCTATAAAACCCTCACTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTTTTAATAGCCCAACAAGGTTCTATCTATAAAACCCTCACTTC  700

seq1  TTATATAGTATAAAATAGTAGAAACTGTTTAATTAATGCAGATAGCTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAGTATAAAATAGTAGAAACTGTTTAATTAATGCAGATAGCTCTT  750

seq1  TCAAATAATAACCAATGAAGCTAAGGTGACTCTGAAAATCAGTAAGACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAATAACCAATGAAGCTAAGGTGACTCTGAAAATCAGTAAGACAG  800

seq1  GCTTTTAGTGAAAGTTTGTTACAGGAGCCACCACAGTTTATATCAAATAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTAGTGAAAGTTTGTTACAGGAGCCACCACAGTTTATATCAAATAC  850

seq1  TGAGAAGTGTGTCAATTCGTAAGGGAGATATGATGATTATAAGAACATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGTGTGTCAATTCGTAAGGGAGATATGATGATTATAAGAACATAG  900

seq1  ATAACTAAGAAGAGAACCTTAAAATACTAAAAACTTACATAATTAAAGAA  950
      ||||||||| |||||||||||||||||| |||||||||||||||||||||
seq2  ATAACTAAG-AGAGAACCTTAAAATACT-AAAACTTACATAATTAAAGAA  948

seq1  AGAATACATAATTAAAGTCACCCTACAAAGGTAGGCTTTGAACTGCTTTT  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGAATACATAATTAAAGTCACTCTACAAAGGTAGGCTTTGAACTGCTTTT  998

seq1  CTAGAACAACAGAAACATACTATCAT-GGTTCTGAACACTAAAAGCCAAA  1049
      |||||||||||||||||||||||||| ||||||||||||| |||||| ||
seq2  CTAGAACAACAGAAACATACTATCATGGGTTCTGAACACT-AAAGCC-AA  1046

seq1  AGTCAAAATGCCAACAGGACATGCGCCCTGTCCAGAGGCACTGGAGTGCA  1099
      |||||||||| | |||||||||||| |||||||| | ||||||||||| |
seq2  AGTCAAAATGGC-ACAGGACATGCG-CCTGTCCA-AAGCACTGGAGTG-A  1092

seq1  CCTTCTGTTGCCCCTTTGCTGTAGTTAAAGGGCCGATCTCTCATGGCACT  1149
      |||   |||||||| ||||||||| ||||||| ||||||||| |||||||
seq2  CCTCTCGTTGCCCC-TTGCTGTAG-TAAAGGG-CGATCTCTC-TGGCACT  1138

seq1  ATTAGGCATTGGTGAAATGTTTAGAGATACAATCTAGCAAGAG  1192
      | |||||| ||||| |||| |||||||||| ||||||| ||||
seq2  A-TAGGCA-TGGTG-AATG-TTAGAGATAC-ATCTAGCCAGAG  1176

seq1: chr7_70364800_70365747
seq2: B6Ng01-026H20.g_70_1005 (reverse)

seq1  AAAAAATAAGGTAGAGAGTAACCAAAAAAAATAGCTGACATCAACTTCAC  50
      ||||||    ||||| |||| ||||||||||| || |||||| ||||| |
seq2  AAAAAA----GTAGA-AGTACCCAAAAAAAAT-GC-GACATC-ACTTC-C  41

seq1  CTCATGAACACACACACATACACGTACATGCACAGGCACACACTCACACA  100
      ||||||||||||||||| |||||||||||||||| |||||||||||||||
seq2  CTCATGAACACACACAC-TACACGTACATGCACA-GCACACACTCACACA  89

seq1  TTTGTTGCCTGACCCTACCTGCAGGGGGTTGGAGGTGAGGTGGCACAGAG  150
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTG-CTGACCCTACCTGCAGGGGGTTGGAGGTGAGGTGGCACAGAG  138

seq1  TCAATGACACAGACTCGGGGAGCAGGTGAGAAACAGTGCAGCAAGTTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGACACAGACTCGGGGAGCAGGTGAGAAACAGTGCAGCAAGTTCTC  188

seq1  TGAACACTGCAAGCTCCTTTATTACCCTCCACCCATGCCCCATTAGTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACTGCAAGCTCCTTTATTACCCTCCACCCATGCCCCATTAGTCCC  238

seq1  AAGAAAGCATCTCTTCTAAACAGCAGTTCCCGATTGGCTGGCATTGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGCATCTCTTCTAAACAGCAGTTCCCGATTGGCTGGCATTGTCTG  288

seq1  CATCAGCAATTCTTGGTCTCTCAGGCAGTCCTCAATTAGGTCCTCCTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGCAATTCTTGGTCTCTCAGGCAGTCCTCAATTAGGTCCTCCTGCA  338

seq1  GGAGATGCTTTTGTGGCTGTGCAGCCCCCAGATTTTACATAGAGGAACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATGCTTTTGTGGCTGTGCAGCCCCCAGATTTTACATAGAGGAACCC  388

seq1  CTAACGTTCCTGCTACACATGTGCACACATCTATGGGCACATGTACAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACGTTCCTGCTACACATGTGCACACATCTATGGGCACATGTACAGAC  438

seq1  ACCACACAAATGTTTTCGATTTTAAAAGAAACTTTCCTTTTCTTCTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACAAATGTTTTCGATTTTAAAAGAAACTTTCCTTTTCTTCTATTT  488

seq1  CAGATAGAAATTTTTATGCTTTTTAGAAATCAGTGAAAATAGATCGTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGAAATTTTTATGCTTTTTAGAAATCAGTGAAAATAGATCGTTGG  538

seq1  TAAGCATCTATTATGATAATACTGGCTATATCTTTGTTTTAAAGAAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATCTATTATGATAATACTGGCTATATCTTTGTTTTAAAGAAAAGA  588

seq1  TCTATTTTTATATTCATGAGCGTTTGGCCTGCACGTTCGTTACATACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTTATATTCATGAGCGTTTGGCCTGCACGTTCGTTACATACACA  638

seq1  CCTGGTATCCTTGGAGGCCAGAAGCATCACCAAATTTCCCAGAAGTAGCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTATCCTTGGAGGCCAGAAGCATCACCAAATTTCCCAGAAGTAGCG  688

seq1  TTACAGATGGTTATGAGTCATCACGTAAGTTCGTGAGACTGAACCTGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGATGGTTATGAGTCATCACGTAAGTTCGTGAGACTGAACCTGGTC  738

seq1  CCTCTGCACCAGCAGAGTACTCTTAAGTCCTAAGCCACTCTAGCCCAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCACCAGCAGAGTACTCTTAAGTCCTAAGCCACTCTAGCCCAATT  788

seq1  TTTCTTTTCTCATCTATCAATATGAAGTTTTCTGATGATTCGTGAAAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTCATCTATCAATATGAAGTTTTCTGATGATTCGTGAAAGCT  838

seq1  GTGAAGGAGAGTGATGCCTATCCCCCACCAGCTTCCAGGAGCCCTTACCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGAGAGTGATGCCTATCCCCCACCAGCTTCCAGGAGCCCTTACCT  888

seq1  GTTCAGACTCAACTCCCGAGTCCCTCTTCTCCTCTTCACAGTGAATTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGACTCAACTCCCGAGTCCCTCTTCTCCTCTTCACAGTGAATTC  936