BAC Information

Click to search

BAC

Clone NameB6Ng01-026H23
Chromosome7 (Build37)
Map Location 128,231,387 - 128,232,291
singlet/doubletsinglet
Overlap geneOtoa
Upstream geneDnahc3, Tmem159, Zp2, Anks4b, Crym, Abca14, Abca15, Abca16, LOC668429, LOC546994, LOC100042914, E130201H02Rik, LOC637957, Uqcrc2, 4930408O21Rik, BC030336, E030013G06Rik, EG436008, LOC100043426, Eef2k, Polr3e, Cdr2, 4933427G17Rik, EG668548, Mettl9, LOC668456, Igsf6
Downstream geneLOC668556, Hs3st2, Usp31, Scnn1g, Scnn1b, Cog7, Gga2, Ears2, Ubfd1, Ndufab1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026H23.bB6Ng01-026H23.g
ACCDH857524DH857525
length1,271900
definitionDH857524|Mus musculus domesticus DNA, BAC clone: B6Ng01-026H23, 5' end.DH857525|Mus musculus domesticus DNA, BAC clone: B6Ng01-026H23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaccatgtaaggctatcactccgagggttttcatatactcacgaa
ggggtacagctctcagtatcgtttattttagaacatgctaatcaccccaa
agagaaattacactcctgtcggtgatcaccccgttttcccagcccctccc
atcagcccccggcaggcagaggtctatttttgtctctatagatcagccta
ccatggtcatttcacagaaatggaattatataatacataggatgtgttct
gtacctgacttatttcacttagcataaggtggtcaagctttatccatttt
gtgcctgtgttagtaattcttcttttttgaagcattcagtggttttaaag
tgcagttgagtgacataaaagcactctttcacacatccacctccaaaatt
cttttcattctgtaaaaactgaaatattaacccattaataagaatccctc
cccaacctctttcaagtcttagaaactatcaccctacattctgtctttat
aggtccgctgcctgtgcttttaactcagtgcccctcaaccttcctgatgc
tgtgagcctttaatacagtttctcatcttgtgctgacccaaaccataaaa
ttatttcattgcaacttcatatctgtaattttgctactattgtgaattaa
tcataatgcaaatatccaatatacaagatacctgatatgtgacccctgtg
aaagggtcatttgagctcccaaaggggtcatgactcacaggttgagaata
actcttttaattgctaaataatattccattggatggctatatcaaatttt
gtttaaagtatcattccaatattgggtggaaataggccctgtgtgttatt
agtttccattactgtcacaaaatacctgtgagaaccaacttattaaaaag
aattgttcattttggctcatgttgggaaggtaacagaacaccataacagg
acagatggtagaggacagcatcacttcatggccaggaaggttaagcaaga
acaacagcacctattactgctgggacaggcacagtgactgctgggaacag
gcaccaatgactgctgggacagcacaatgacgtgctgggacaggcacctt
taatgctgggaacagcacaaggactgctgggaaagacaatgatgcttgga
accgacccatgaatgtctaggaaggactactcttcccgtaacctcttatt
gtgcaggcaaggctctctacctggcatccacacgatatcttcacccctgg
gtattatatggtgtcatgctc
gaattcacagagggttgcctggaagacttgggacttataatgaattgggt
gagccaagccaaaagggaggagagatctttacaaaggaccttgaactgag
aaatatgacaactcggagagacacaaagaagcaggtgccccgaccactag
tgggttcgctactgacaggcatgggctgacactttggaaactgcagcctg
acctcctcggttgtaaaaactcaaactcagaactccttccgacctaagct
ccattcaaaatgactaattcatttctcaaagggcaccatcaggtgggtac
ctgtgctggttagtctttgtcaactcatcacaaactagcgtcatctcgga
agagggaccctcagctgaggaattacctctgtcacgttggcctgtaggtg
cagctctgggacctttccttgttaatgatgtagcagaattgcctctctgt
gggcggggccatccctgggtgctcagttctgggttgtataagaaagcagg
ctgagcaagcccctgagaagcaagccagtaggtagcactcctccatggcc
tctgcttcagttcctacctccaggttcctgccctggcttccctggatgat
ggactgtaagctgggggccaaattaaccctttcctccccaagttggtttt
ggtcagtattttattacaagcaagctaggacagtaccacttaatacccca
ttttatagctgagaaaattgaagtacagagaggtgaacgaagcaagttgc
ttgacatcacccaagctagtgagtgggcagagggaagagagaaaccaggc
catgtgagtacagcccatggtttctctccctttggggaggtatagatgta
ataatttcaccggtttaaacacacatatcagagacttgtaactgtggctt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_128231387_128232291
seq2: B6Ng01-026H23.g_67_966

seq1  GAATTCACAGAGGGTTGCCTGGAAGACTTGGGACTTATAATGAATTGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGAGGGTTGCCTGGAAGACTTGGGACTTATAATGAATTGGGT  50

seq1  GAGCCAAGCCAAAAGGGAGGAGAGATCTTTACAAAGGACCTTGAACTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAAGCCAAAAGGGAGGAGAGATCTTTACAAAGGACCTTGAACTGAG  100

seq1  AAATATGACAACTCGGAGAGACACAAAGAAGCAGGTGCCCCGACCACTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGACAACTCGGAGAGACACAAAGAAGCAGGTGCCCCGACCACTAG  150

seq1  TGGGTTCGCTACTGACAGGCATGGGCTGACACTTTGGAAACTGCAGCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCGCTACTGACAGGCATGGGCTGACACTTTGGAAACTGCAGCCTG  200

seq1  ACCTCCTCGGTTGTAAAAACTCAAACTCAGAACTCCTTCCGACCTAAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTCGGTTGTAAAAACTCAAACTCAGAACTCCTTCCGACCTAAGCT  250

seq1  CCATTCAAAATGACTAATTCATTTCTCAAAGGGCACCATCAGGTGGGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCAAAATGACTAATTCATTTCTCAAAGGGCACCATCAGGTGGGTAC  300

seq1  CTGTGCTGGTTAGTCTTTGTCAACTCATCACAAACTAGCGTCATCTCGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTGGTTAGTCTTTGTCAACTCATCACAAACTAGCGTCATCTCGGA  350

seq1  AGAGGGACCCTCAGCTGAGGAATTACCTCTGTCACGTTGGCCTGTAGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGACCCTCAGCTGAGGAATTACCTCTGTCACGTTGGCCTGTAGGTG  400

seq1  CAGCTCTGGGACCTTTCCTTGTTAATGATGTAGCAGAATTGCCTCTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTGGGACCTTTCCTTGTTAATGATGTAGCAGAATTGCCTCTCTGT  450

seq1  GGGCGGGGCCATCCCTGGGTGCTCAGTTCTGGGTTGTATAAGAAAGCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGGGGCCATCCCTGGGTGCTCAGTTCTGGGTTGTATAAGAAAGCAGG  500

seq1  CTGAGCAAGCCCCTGAGAAGCAAGCCAGTAGGTAGCACTCCTCCATGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAAGCCCCTGAGAAGCAAGCCAGTAGGTAGCACTCCTCCATGGCC  550

seq1  TCTGCTTCAGTTCCTACCTCCAGGTTCCTGCCCTGGCTTCCCTGGATGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCAGTTCCTACCTCCAGGTTCCTGCCCTGGCTTCCCTGGATGAT  600

seq1  GGACTGTAAGCTGGGGGCCAAATTAACCCTTTCCTCCCCAAGTTGGTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGTAAGCTGGGGGCCAAATTAACCCTTTCCTCCCCAAGTTGGTTTT  650

seq1  GGTCAGTATTTTATTACAAGCAAGCTAGGACAGTACCACTTAATACCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGTATTTTATTACAAGCAAGCTAGGACAGTACCACTTAATACCCCA  700

seq1  TTTTATAGCTGAGAAAATTGAAGTACAGAGAGGTGAACGAAGCAAGTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAGCTGAGAAAATTGAAGTACAGAGAGGTGAACGAAGCAAGTTGC  750

seq1  TTGACATCACCCAAGCTAGTGAGTGGGCAGAGGGAAGAGAGAAACCAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATCACCCAAGCTAGTGAGTGGGCAGAGGGAAGAGAGAAACCAGGC  800

seq1  CATGTGAGTACAGCCCATGGTTTCTCTCCACTTTGGGGAGGTATTAGATG  850
      ||||||||||||||||||||||||||||| ||||||||||||| ||||||
seq2  CATGTGAGTACAGCCCATGGTTTCTCTCC-CTTTGGGGAGGTA-TAGATG  848

seq1  TAATAATTTTCACCGGTTTAAAACACACATATCAGTAGACTTGTAACTGT  900
      |||||| |||||||||||| ||||||||||||||| ||||||||||||||
seq2  TAATAA-TTTCACCGGTTT-AAACACACATATCAG-AGACTTGTAACTGT  895

seq1  GGCTT  905
      |||||
seq2  GGCTT  900