BAC Information

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BAC

Clone NameB6Ng01-026I11
Chromosome7 (Build37)
Map Location 119,736,011 - 119,902,198
singlet/doubletdoublet
Overlap geneLOC627808, Tead1
Upstream geneGalntl4, LOC668399, LOC100042678, Usp47, Dkk3, Mical2, Micalcl, Parva
Downstream gene4632411J06Rik, LOC434227, Arntl, A630005I04Rik, Btbd10, Pth, LOC100042736, Mlstd2, EG434228
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026I11.bB6Ng01-026I11.g
ACCDH857546DH857547
length1,067902
definitionDH857546|Mus musculus domesticus DNA, BAC clone: B6Ng01-026I11, 5' end.DH857547|Mus musculus domesticus DNA, BAC clone: B6Ng01-026I11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,901,124 - 119,902,198)(119,736,011 - 119,736,906)
sequence
gaattcctgattacatggaaactgtggtgcaatatttccttaagttttag
ggcaatgaagataacagaaacacaagaaatctttctccaagatgtagatg
cattccccttcaattgtacacagcccctatagtcacaaggggataagctt
tctaaacaaatggcttgacaccaacctgaaaatgatcaaatccagtactc
cctgctggctgcacactaacatatcaatattgctttgtgaaaactacatc
agatcattaatgcaaaggactccccaaaagaaggacaaagagacctgggg
gacagtgagaaaggagccacagtgtgctgagcagggaggctctcatgtga
tccctgctgtccccttagatccctgcagcatttcaacacaagaaaccaaa
ggaaagcatgcccatgctccaggacactgtcagcttcccttcactctacc
aactgcatcctctcggctgttctcctcagtctgtgcatttcaacagaccc
cagggacagaaactctgaatattgtgaaatctatgttccaactgatgggt
ggctttgggttcctcaccttgacttttttcagtttggcagcatttgcctt
aaagaaaaattagcatacttagtttcaactgttaccaccaagccatcatt
cagagaacacgtcagcaagatactgacagccccttaccaacacacacatg
cttacacaggacttgaaaatatgccagtgtcaaggtataaattatgaaac
tagaaagggcttcgtgactggcctcaagatgaactctcggtgcctgcctc
gtgggcctttagaatttttaaatgattacattttgggttgggatctgaga
gttatacaatttgagctaagttgtaaccaccatagtgattgcttactgga
gaaattacgagaataggagggaacgctttgatagtggctagctctccgcc
aaacacaaacatgcacacaacatgtgaaaccatagaccagccagacagat
cacagttggataatttcctcagggagctgtatttaagataaacatatggg
atgggggggggggggct
gaattccagggctgtaattttccaataaccagactctccggcgtgtatac
attgtggttcccatatgaatcagtgtcttccagcgtgagagcacatgtat
acatcacccattccctgcccccccccaaattagtgctcatttatttttcc
actggaaaatgagagtggatggaatccataggtcagggggcttagactcc
ctaagcaggaaaggctttgagactccctgccttgagtgcagccccgcctc
aggaatccaagctaggggccccagcctactctggcaagaggaatatgtcc
tccagccttctctaatgcaagcattgcatagaatctctcccaccagattg
acaggctgtattggaaaatacaggacagtcactcaaaaactgagaaccgg
agaaccacactgaggtacagtactgcatggttgattgacatactcactga
ctgtataaaatttttaaaaatacttttaacttactttgttttaatgtgag
tattttgtctgcatgcatgtatatgtaccacatgcatgtagtctcaacag
atttcagaagaaggcatcagctcaggtcccctagcactgaagatccggat
ggtttttgagccactatgtgaatattgggaagcaagcccagttcctctgg
agcacaggaagtgctcttaacctcccagcaacctctttaaccaagaaaat
agtagagagtggcacagggtgtgtgtatgtgtgggggagacagtcttttc
ataaaagatattgaaggatcttaccaatttggtatctaggggtcgttctt
gaaccaatcccaaggacacaaaacgacaaccttatttaaaaattatggaa
gtggtccaatttggatttggggccccgagagggttgtggaaattacgcat
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_119901124_119902198
seq2: B6Ng01-026I11.b_44_1110 (reverse)

seq1  AG-CCCCCCCCCCCCATACCTTATGTTTATCTTTAAATACAGCTTCCTTG  49
      || |||||||||||||| || |||||||||| ||||||||||| ||| ||
seq2  AGCCCCCCCCCCCCCATCCCATATGTTTATC-TTAAATACAGC-TCCCTG  48

seq1  AGTGAATTTATTCCACTGTGATCTGTCCTGGCTTGGTCTATGGTTTCACA  99
      || ||| |||| | |||||||||||| ||||| |||||||||||||||||
seq2  AG-GAAATTATCCAACTGTGATCTGT-CTGGC-TGGTCTATGGTTTCACA  95

seq1  TGTTGTGTGCATTGTTTTGTGTTTTGGCGGAGAGGCTAGCCACTATCAAA  149
      ||||||||||||   |||||| ||||||||||| ||||||||||||||||
seq2  TGTTGTGTGCAT--GTTTGTG-TTTGGCGGAGA-GCTAGCCACTATCAAA  141

seq1  GCGTTCCCTCCTATTCTCGTAATTTCTCCAGTAAGCAATCACTATGGTGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTCCCTCCTATTCTCGTAATTTCTCCAGTAAGCAATCACTATGGTGG  191

seq1  TTACAACTTAGCTCAAATTGTATAACTCTCAGATCCCAACCCAAAATGTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACTTAGCTCAAATTGTATAACTCTCAGATCCCAACCCAAAATGTA  241

seq1  ATCATTTAAAAATTCTAAAGGCCCACGAGGCAGGCACCGAGAGTTCATCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTAAAAATTCTAAAGGCCCACGAGGCAGGCACCGAGAGTTCATCT  291

seq1  TGAGGCCAGTCACGAAGCCCTTTCTAGTTTCATAATTTATACCTTGACAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCAGTCACGAAGCCCTTTCTAGTTTCATAATTTATACCTTGACAC  341

seq1  TGGCATATTTTCAAGTCCTGTGTAAGCATGTGTGTGTTGGTAAGGGGCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATATTTTCAAGTCCTGTGTAAGCATGTGTGTGTTGGTAAGGGGCTG  391

seq1  TCAGTATCTTGCTGACGTGTTCTCTGAATGATGGCTTGGTGGTAACAGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATCTTGCTGACGTGTTCTCTGAATGATGGCTTGGTGGTAACAGTT  441

seq1  GAAACTAAGTATGCTAATTTTTCTTTAAGGCAAATGCTGCCAAACTGAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAAGTATGCTAATTTTTCTTTAAGGCAAATGCTGCCAAACTGAAA  491

seq1  AAAGTCAAGGTGAGGAACCCAAAGCCACCCATCAGTTGGAACATAGATTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAAGGTGAGGAACCCAAAGCCACCCATCAGTTGGAACATAGATTT  541

seq1  CACAATATTCAGAGTTTCTGTCCCTGGGGTCTGTTGAAATGCACAGACTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATATTCAGAGTTTCTGTCCCTGGGGTCTGTTGAAATGCACAGACTG  591

seq1  AGGAGAACAGCCGAGAGGATGCAGTTGGTAGAGTGAAGGGAAGCTGACAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAACAGCCGAGAGGATGCAGTTGGTAGAGTGAAGGGAAGCTGACAG  641

seq1  TGTCCTGGAGCATGGGCATGCTTTCCTTTGGTTTCTTGTGTTGAAATGCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGGAGCATGGGCATGCTTTCCTTTGGTTTCTTGTGTTGAAATGCT  691

seq1  GCAGGGATCTAAGGGGACAGCAGGGATCACATGAGAGCCTCCCTGCTCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGATCTAAGGGGACAGCAGGGATCACATGAGAGCCTCCCTGCTCAG  741

seq1  CACACTGTGGCTCCTTTCTCACTGTCCCCCAGGTCTCTTTGTCCTTCTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTGGCTCCTTTCTCACTGTCCCCCAGGTCTCTTTGTCCTTCTTT  791

seq1  TGGGGAGTCCTTTGCATTAATGATCTGATGTAGTTTTCACAAAGCAATAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGTCCTTTGCATTAATGATCTGATGTAGTTTTCACAAAGCAATAT  841

seq1  TGATATGTTAGTGTGCAGCCAGCAGGGAGTACTGGATTTGATCATTTTCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGTTAGTGTGCAGCCAGCAGGGAGTACTGGATTTGATCATTTTCA  891

seq1  GGTTGGTGTCAAGCCATTTGTTTAGAAAGCTTATCCCCTTGTGACTATAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTGTCAAGCCATTTGTTTAGAAAGCTTATCCCCTTGTGACTATAG  941

seq1  GGGCTGTGTACAATTGAAGGGGAATGCATCTACATCTTGGAGAAAGATTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGTGTACAATTGAAGGGGAATGCATCTACATCTTGGAGAAAGATTT  991

seq1  CTTGTGTTTCTGTTATCTTCATTGCCCTAAAACTTAAGGAAATATTGCAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTTTCTGTTATCTTCATTGCCCTAAAACTTAAGGAAATATTGCAC  1041

seq1  CACAGTTTCCATGTAATCAGGAATTC  1075
      ||||||||||||||||||||||||||
seq2  CACAGTTTCCATGTAATCAGGAATTC  1067

seq1: chr7_119736011_119736906
seq2: B6Ng01-026I11.g_66_967

seq1  GAATTCCAGGGCTGTAATTTTCCAATAACCAGACTCTCCGGCGTGTATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGCTGTAATTTTCCAATAACCAGACTCTCCGGCGTGTATAC  50

seq1  ATTGTGGTTCCCATATGAATCAGTGTCTTCCAGCGTGAGAGCACATGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGTTCCCATATGAATCAGTGTCTTCCAGCGTGAGAGCACATGTAT  100

seq1  ACATCACCCATTCCCTGCCCCCCCCCAAATTAGTGCTCATTTATTTTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACCCATTCCCTGCCCCCCCCCAAATTAGTGCTCATTTATTTTTCC  150

seq1  ACTGGAAAATGAGAGTGGATGGAATCCATAGGTCAGGGGGCTTAGACTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAAATGAGAGTGGATGGAATCCATAGGTCAGGGGGCTTAGACTCC  200

seq1  CTAAGCAGGAAAGGCTTTGAGACTCCCTGCCTTGAGTGCAGCCCCGCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCAGGAAAGGCTTTGAGACTCCCTGCCTTGAGTGCAGCCCCGCCTC  250

seq1  AGGAATCCAAGCTAGGGGCCCCAGCCTACTCTGGCAAGAGGAATATGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCCAAGCTAGGGGCCCCAGCCTACTCTGGCAAGAGGAATATGTCC  300

seq1  TCCAGCCTTCTCTAATGCAAGCATTGCATAGAATCTCTCCCACCAGATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCTTCTCTAATGCAAGCATTGCATAGAATCTCTCCCACCAGATTG  350

seq1  ACAGGCTGTATTGGAAAATACAGGACAGTCACTCAAAAACTGAGAACCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTGTATTGGAAAATACAGGACAGTCACTCAAAAACTGAGAACCGG  400

seq1  AGAACCACACTGAGGTACAGTACTGCATGGTTGATTGACATACTCACTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCACACTGAGGTACAGTACTGCATGGTTGATTGACATACTCACTGA  450

seq1  CTGTATAAAATTTTTAAAAATACTTTTAACTTACTTTG-TTTAATGTGAG  499
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTGTATAAAATTTTTAAAAATACTTTTAACTTACTTTGTTTTAATGTGAG  500

seq1  TATTTTGTCTGCATGCATGTATATGTACCACATGCATGTAGTCTCAACAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTCTGCATGCATGTATATGTACCACATGCATGTAGTCTCAACAG  550

seq1  ATTTCAGAAGAAGGCATCAGCTCAGGTCCCCTAGCACTGAAGATCCGGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGAAGAAGGCATCAGCTCAGGTCCCCTAGCACTGAAGATCCGGAT  600

seq1  GG-TTTTGAGCCACTATGTGAATATTGGGAAGCAAGCCCAGTTCCTCTGG  648
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTGAGCCACTATGTGAATATTGGGAAGCAAGCCCAGTTCCTCTGG  650

seq1  AGCACAGGAAGTGCTCTTAACCTCCCAGCAACCTCTTTAACCAAGAAAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGGAAGTGCTCTTAACCTCCCAGCAACCTCTTTAACCAAGAAAAT  700

seq1  AGTAGAGAGTGGCACA-GGTGTGTGTATGTGT-GGGGAGACAGTC-TTTC  745
      |||||||||||||||| ||||||||||||||| |||||||||||| ||||
seq2  AGTAGAGAGTGGCACAGGGTGTGTGTATGTGTGGGGGAGACAGTCTTTTC  750

seq1  ATAAAAGATATTGAAGGATC-TACCAATTTGGTATCTAGGGGTCGTTCTT  794
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATAAAAGATATTGAAGGATCTTACCAATTTGGTATCTAGGGGTCGTTCTT  800

seq1  GAACCAATCCCAAGGACACAAAACGACAACCATA-TTAAAAATTATGGAA  843
      ||||||||||||||||||||||||||||||| || |||||||||||||||
seq2  GAACCAATCCCAAGGACACAAAACGACAACCTTATTTAAAAATTATGGAA  850

seq1  GTGGTCCAATTTGGATTTGGGGCGCCAGAGAGGGTTGTGGAAATACGGCA  893
      ||||||||||||||||||||||| || |||||||||||||||||   |||
seq2  GTGGTCCAATTTGGATTTGGGGC-CCCGAGAGGGTTGTGGAAATTACGCA  899

seq1  TTC  896
      |||
seq2  TTC  902