BAC Information

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BAC

Clone NameB6Ng01-027D23
Chromosome7 (Build37)
Map Location 50,638,901 - 50,639,520
singlet/doubletsinglet
Overlap genenone
Upstream geneVmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf
Downstream geneSiglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027D23.bB6Ng01-027D23.g
ACCDH858044DH858045
length723934
definitionDH858044|Mus musculus domesticus DNA, BAC clone: B6Ng01-027D23, 5' end.DH858045|Mus musculus domesticus DNA, BAC clone: B6Ng01-027D23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcataagattcttaggcaaatggatagaactagaaaatattatcct
gagtgaggtaacccaatcagaaaagaagatacatggaatgtactcacaga
taagtggatattagcccaatagttctgaatacccaagatagaattcacag
accacatgaagctcaaggacaatgaagactaaagtgggggtgcttctgtc
cttctcagaaaggggaacaaaatacttatgggataaaattgaggttaaaa
gtgtagagcagagattgaaggaaagctgatccagagactgacacatctgg
ggatccatcctgtatacagtcaccaacccagacactgtggtggatgccaa
gtagtgcttgctgaaaggaggctgatatagttatttcctgaggtgctcgg
cagagcctaacaaatacagaggcagatactagcagccaactactggaatg
agcacctaatggaggacttagagaaaggactgaaggagctgaaggggttt
gcaaccccataggatgaacaacatcaaccaaccagatccccacagagctc
ccagggactaagccaccaaccaaggagtatacaaggagggacccatggcc
ccagctgcatatgtagcagaggatggctttgtgaagcatcaatgagagga
gaggcccttggtcctgtgaaagcttgatggataccccagtacaggagaat
ttgagtgtgggtagggtgggagt
gaattctcctccttacatctagtgcactgtttccttaaagtgctttcaga
gtgaaacctcaccatgcccttcttgtgacacaaaagagaaacagtgcaca
ggaaaggatcagcctttaacgccatccttgggtgtggcgcagccatatct
gtgtccccaagatgaagatcagtgcttccttccgtgttctcgatctacat
ctcttcaaacaggctccagtgaaatccagatcactagaggatactttgaa
aacttacattgcgaatatgtggaaaaaatctgacaagatggtaaatttct
aaatatatataacgtacctaacaaaaagctagaagataaagacaatttaa
aagaccagtaataaacaatgagagtgaagcagtaattaagcctccttata
gggtctgcagaggtggctcagagatggttgcaagtactagatgctattgc
tgaggatccaaagtcagttcccagctccacgtggcagctcacaatcatca
gtaaatataattccaggggatttaactccttcttctgttttttttttttt
ttggcaccagggagacttgtggtgcacatatatgcatactgcattcacac
atacactaaaattaaaaataaacacagttcttaaaactgtccataaaaac
gcccaggatcagatggagtcagttctgaattatatcaaactttatgaaaa
cacaatacaaacacttttcaaaatagaagagaaaggaacactactgaatt
tagttgatgaagccagtattttcttgataccaaaaccaagataaaaacac
aaccatgggcaataatatttctgaacagcccaaaagctacagaccaattt
tcctgtgcggatgtaaaattctcaataagatgattgcaaatctgactcat
gaacacattaagaaggatgtataccatgatcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_50638901_50639520
seq2: B6Ng01-027D23.g_66_685 (reverse)

seq1  TATTTTTAATTTTAGTGTATGTGTGAATGCAGTATGCATATATGTGCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAATTTTAGTGTATGTGTGAATGCAGTATGCATATATGTGCACC  50

seq1  ACAAGTCTCCCTGGTGCCAAAAAAAAAAAAAAACAGAAGAAGGAGTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCTCCCTGGTGCCAAAAAAAAAAAAAAACAGAAGAAGGAGTTAAA  100

seq1  TCCCCTGGAATTATATTTACTGATGATTGTGAGCTGCCACGTGGAGCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGGAATTATATTTACTGATGATTGTGAGCTGCCACGTGGAGCTGG  150

seq1  GAACTGACTTTGGATCCTCAGCAATAGCATCTAGTACTTGCAACCATCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGACTTTGGATCCTCAGCAATAGCATCTAGTACTTGCAACCATCTC  200

seq1  TGAGCCACCTCTGCAGACCCTATAAGGAGGCTTAATTACTGCTTCACTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCACCTCTGCAGACCCTATAAGGAGGCTTAATTACTGCTTCACTCT  250

seq1  CATTGTTTATTACTGGTCTTTTAAATTGTCTTTATCTTCTAGCTTTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTTATTACTGGTCTTTTAAATTGTCTTTATCTTCTAGCTTTTTGT  300

seq1  TAGGTACGTTATATATATTTAGAAATTTACCATCTTGTCAGATTTTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTACGTTATATATATTTAGAAATTTACCATCTTGTCAGATTTTTTCC  350

seq1  ACATATTCGCAATGTAAGTTTTCAAAGTATCCTCTAGTGATCTGGATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTCGCAATGTAAGTTTTCAAAGTATCCTCTAGTGATCTGGATTTC  400

seq1  ACTGGAGCCTGTTTGAAGAGATGTAGATCGAGAACACGGAAGGAAGCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGCCTGTTTGAAGAGATGTAGATCGAGAACACGGAAGGAAGCACT  450

seq1  GATCTTCATCTTGGGGACACAGATATGGCTGCGCCACACCCAAGGATGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCATCTTGGGGACACAGATATGGCTGCGCCACACCCAAGGATGGC  500

seq1  GTTAAAGGCTGATCCTTTCCTGTGCACTGTTTCTCTTTTGTGTCACAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGGCTGATCCTTTCCTGTGCACTGTTTCTCTTTTGTGTCACAAGA  550

seq1  AGGGCATGGTGAGGTTTCACTCTGAAAGCACTTTAAGGAAACAGTGCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATGGTGAGGTTTCACTCTGAAAGCACTTTAAGGAAACAGTGCACT  600

seq1  AGATGTAAGGAGGAGAATTC  620
      ||||||||||||||||||||
seq2  AGATGTAAGGAGGAGAATTC  620