BAC Information

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BAC

Clone NameB6Ng01-027N15
Chromosome12 (Build37)7 (Build37)
Map Location 96,448,962 - 96,449,20121,745,817 - 21,746,668
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC217786, LOC100039603
Downstream geneLOC667688, Flrt2, 1700019M22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027N15.bB6Ng01-027N15.g
ACCDH858487DH858488
length474853
definitionDH858487|Mus musculus domesticus DNA, BAC clone: B6Ng01-027N15, 5' end.DH858488|Mus musculus domesticus DNA, BAC clone: B6Ng01-027N15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(96,448,962 - 96,449,201)(21,745,817 - 21,746,668)
sequence
gaattcataaaactcaagaagaatgaagaccaaagtgtgcatacttttcc
ccttgttagaattgggaacaaaacacccatggaaggagttgcagggacca
agtttggagctgagacaaaaggatcgttcaattagagactgacatatccg
ggaatccatcccatagtcagcctccaaacgctgagaccattgcatacact
agcaagattttgctgaaaggacactgatatagatgtctcttgtgacacta
ttccggggcctagtaaacacagaagttcatgctcacagtcagttactgga
tggatcacatggcccccaatggaggagctagagaaagtaaccaaggagca
taagggatctgcaaccctataggtggaacaacaatatgaactaaccagta
ccccccggagctcgtgtctctatctgcatatgtatcagaagatatcctag
tcggccatcagtggaaagagaggc
gaattctttaaagaaagttaaaaaataaaaaaagaaaagaaaagtagaaa
agtacttcaggagagagagagagagagagagagagagagagagagagaga
gagagagagaaagaatatgagaataggaaatgggcttttcaagggagact
cacagtttcttggtagtggatagacataagatcttaatggctctcaagtt
acacttctaaggttgctaagaaatattacacacacacacacacacacaca
cacacacacacacacacggattgggggggaattttaaagtatttttaaaa
gaatgttattttgtaatgttaaaaatcaaaggcattgaggcttgggagag
tgcagcaggtggactgcagagctgaagtggaccaagcatactgtagcctt
gggcttctgcatcctaaggccttccttttccgcaccacttgctgggtccc
tgtttccagggtgcacagtggagaaggaccaggctgtgccatgacaccct
gggactattgggcagcgtgcttgtttagcatcattctgctgaagccacca
tgttgagtttgcatcctgaggttccacaaggtcgattggactgtcactgc
tgctgttgattttaggtcttatgtccctgttttggagaaaaacataattt
accacctctgtttagttgaaatcaaattagcttttggataaattgagtga
agatttcgctccacctgcaaggctggctgactttagactcagggcaaaga
ggagcaggtccaggcatccttccagggacctggatgggggaagatgaggg
aggaggaaagagcgataaaaaacctagagatccctgatttgagcctttgt
gcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_96448962_96449201
seq2: B6Ng01-027N15.b_277_518

seq1  ATGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGC  50
      ||||||||||||| ||||| ||||||||||| ||||||||||||  ||||
seq2  ATGTCTCTTGTGACACTATTCCGGGGCCTAGTAAACACAGAAGTTCATGC  50

seq1  TCACAGTCAGCTAATGGATGGATCATAGGGCTCCCAATGGAGGAGCTAGA  100
      |||||||||| || ||||||||||| | ||| ||||||||||||||||||
seq2  TCACAGTCAGTTACTGGATGGATCACATGGCCCCCAATGGAGGAGCTAGA  100

seq1  GAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAAC  150
      ||||||| |||||||||  |||||||||||||||||||||||||||||||
seq2  GAAAGTAACCAAGGAGCATAAGGGATCTGCAACCCTATAGGTGGAACAAC  150

seq1  ATTATGAACTAACCAGTA--TCCCGGAGCTCTTGACTCTAGCTGCATATA  198
      | ||||||||||||||||   |||||||||| || ||||| |||||||| 
seq2  AATATGAACTAACCAGTACCCCCCGGAGCTCGTGTCTCTATCTGCATATG  200

seq1  TATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGC  240
      ||||| |||||  ||||||||||||||| |||||||||||||
seq2  TATCAGAAGATATCCTAGTCGGCCATCAGTGGAAAGAGAGGC  242

seq1: chr7_21745817_21746668
seq2: B6Ng01-027N15.g_69_921

seq1  GAATTCTTTAAAGAAAGTTAAAAAATAAAAAAAGAAAAGAAAAGTAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAGAAAGTTAAAAAATAAAAAAAGAAAAGAAAAGTAGAAA  50

seq1  AGTACTTCAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTCAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  100

seq1  GAGAGAGAGAAAGAATATGAGAATAGGAAATGGGCTTTTCAAGGGAGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAAAGAATATGAGAATAGGAAATGGGCTTTTCAAGGGAGACT  150

seq1  CACAGTTTCTTGGTAGTGGATAGACATAAGATCTTAATGGCTCTCAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTTCTTGGTAGTGGATAGACATAAGATCTTAATGGCTCTCAAGTT  200

seq1  ACACTTCTAAGGTTGCTAAGAAATATTACACACACACACACACACACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCTAAGGTTGCTAAGAAATATTACACACACACACACACACACACA  250

seq1  CACACACACACACACACGGATTGGGGGGGAATTTTAAAGTATTTTTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACGGATTGGGGGGGAATTTTAAAGTATTTTTAAAA  300

seq1  GAATGTTATTTTGTAATGTTAAAAATCAAAGGCATTGAGGCTTGGGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTATTTTGTAATGTTAAAAATCAAAGGCATTGAGGCTTGGGAGAG  350

seq1  TGCAGCAGGTGGACTGCAGAGCTGAAGTGGACCAAGCATACTGTAGCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCAGGTGGACTGCAGAGCTGAAGTGGACCAAGCATACTGTAGCCTT  400

seq1  GGGCTTCTGCATCCTAAGGCCTTCCTTTTCCGCACCACTTGCTGGGTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCTGCATCCTAAGGCCTTCCTTTTCCGCACCACTTGCTGGGTCCC  450

seq1  TGTTTCCAGGGTGCACAGTGGAGAAGGACCAGGCTGTGCCATGACACCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCAGGGTGCACAGTGGAGAAGGACCAGGCTGTGCCATGACACCCT  500

seq1  GGGACTATTGGGCAGCGTGCTTGTTTAGCATCATTCTGCTGAAGCCACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTATTGGGCAGCGTGCTTGTTTAGCATCATTCTGCTGAAGCCACCA  550

seq1  TGTTGAGTTTGCATCCTGAGGTTCCACAAGGTCGATTGGACTGTCACTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGTTTGCATCCTGAGGTTCCACAAGGTCGATTGGACTGTCACTGC  600

seq1  TGCTGTTGATTTTAGGTCTTATGTCCCTGTTTTGGAGAAAAACATAA-TT  649
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGCTGTTGATTTTAGGTCTTATGTCCCTGTTTTGGAGAAAAACATAATTT  650

seq1  ACCACCTCTGTTTAGTTGAAATCAAATTAGCTTTTGGATAAA-TGAGTGA  698
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACCACCTCTGTTTAGTTGAAATCAAATTAGCTTTTGGATAAATTGAGTGA  700

seq1  AGATTTCGCTCCACCTGCAAGGCTGGCTGACTTTAGACTCAGGGCAAAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCGCTCCACCTGCAAGGCTGGCTGACTTTAGACTCAGGGCAAAGA  750

seq1  GGAGCAGGTCCAGGCATCCTTCCAGGGACCTGGATGGGGGAAGATGAGGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGGTCCAGGCATCCTTCCAGGGACCTGGATGGGGGAAGATGAGGG  800

seq1  AGGAGGAAAGAGCGATAAAGAAACAAGAGATGCCCTGATTTGAGCCTTTG  848
      ||||||||||||||||||| || | |||||| ||||||||||||||||||
seq2  AGGAGGAAAGAGCGATAAAAAACCTAGAGAT-CCCTGATTTGAGCCTTTG  849

seq1  TGCC  852
      ||||
seq2  TGCC  853