BAC Information

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BAC

Clone NameB6Ng01-028B03
Chromosome7 (Build37)
Map Location 92,026,516 - 92,027,045
singlet/doubletsinglet
Overlap genenone
Upstream geneMesdc1, Mesdc2, 9930013L23Rik, 2210412D01Rik, Arnt2, LOC100039239, Fah, Zfand6, 2610206C17Rik, EG620480, Olfr291
Downstream geneLOC666276, Olfr290, ENSMUSG00000070600, F830104D24Rik, LOC620641, EG620672, Vmn2r-ps68, EG620697, Vmn2r-ps69, LOC330581, LOC100039339, Vmn2r70, Vmn2r-ps72, EG233445, Vmn2r-ps74, EG244114, EG620928
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028B03.bB6Ng01-028B03.g
ACCDH858648DH858649
length1,0151,260
definitionDH858648|Mus musculus domesticus DNA, BAC clone: B6Ng01-028B03, 5' end.DH858649|Mus musculus domesticus DNA, BAC clone: B6Ng01-028B03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatattgagatgtaatatctaaattgaaaagtgatacagatttg
ctacatttgttccatgtagttccatgtgtaggaaacacaaaacattaata
tgaatatactctatttcatctagtgtgagttttatctctgagttcaggca
aagatttcctgacttaaaatgatatagtacttaggtaaaaagatagactt
tagtacatttcactggagaccaagattaaggatacttctgtggccaccat
gaacttttttttggtgtgatagacagtgaggaaagtaaatgagacactac
agaactctagcatgcttaatgtcagaatcttgacttcatcttggggtaac
tctagccaaacaaattaaagacctttatgacaataacttcaagtctctca
agaaagaaatcaaataagatctcagaaaatagagagatatcccatgctca
tgggtcagcagaattaataaaatggccatcctcctaaaggcaatctacag
attcaacacagcccccattaaagttccaacacaattcttcaaagacatgg
gaagagcagttctcaaattcatctggaaaggcaaaaagcccagaatagca
aaaacaattcttaacaataaaagaagtgctgggtaaatcaccatccatga
cctcaagctttactacagagcaggtgtgataaaaactgcatggtattggt
acagagacagacatgttgatcaatggaatagaattgaagactcagaaata
gaaccacacacttacagacaattgatctttgacaaagaagccaaaaatat
acaatggataaaagaaagcatcttcagtatatggtactggtctaactgtc
tgttggtatgtagaaaaattaaaatagacccatatttgttcccttgcaca
aagctcaagtccaaggagatcaaggacatcaacataaatcagatacataa
aaaatacagatctaataaagagaaattgggaagagccttgaactcattgg
cacagggggaaattt
gaattcattgaaaatgatgacacaacataccaaatcttatgggacactac
gaaaacagtgctaagaggaaaattcatagcactaagtgcctttataaaga
aactggagagatcctacagtagtaacttgacattacatctgaaagttcta
gaacaaaatgaaacaactatacccaagaggagtagacagaagtaaataat
caaactcagggcagtaatcaaccaattagaaacaacaagaatgatacaaa
gcatcaataaagagctagttctttgagaaaatcaacaatatagatgataa
atccttagccaaactaactaaaggataaagagacagattccaagttaaca
aaaccagaaatgaaaagggagacataacaacagaaacttaggcaattcaa
aaaatatttagatcttatcacaaaaacctatactcaacaaaactgggaaa
tctccataaaaatgcatgaatttctagacagataacccaaaccaaagtta
aatcaagagaaagtgaactattttaacagtcccataatacctaatgaaac
agaagcagtcattaaaaatccctccccacaaaagcccagggccagatgtt
agtgcaggattctatcagaccttcaatgaaaagttaataccaatactctg
gaaaccattccacaaaatagaaacagatggaacacaacaaaattcatttt
ctgaagttgcagatactctcatattgaaaccacacaaagactcaacaagg
aaagaaaatatcaaactaatctccttacaaatattgatgcaaaaaatact
caataaaattctcacaaatcgaatccaagaccacatcaaaaccatcattc
accaagatcaagtaagttccatcccatggatgcagggttcattcaatata
tgaaaatttatcaacataatccactctataagcaatcttaaaaaaaatca
catgatcatctcattaggtgctaaaaaccttcacaaacccaacactcttt
atgtaaaagtcttggagtgattggaattcaaggtcatacctaatgtataa
aggaataacaacaaacaacacaacacaacacaaaacccgcagccatgttc
aggtacatgaagaactgatcatctactaaaatcgaactgcttccaatttt
tcttattctttcaattaagcacctctaacgctgcttgaacatagaacaag
gaatcagaggattccaattggaaaaaggagtttaggtatctctatcttta
gaggatagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_92026516_92027045
seq2: B6Ng01-028B03.b_43_572 (reverse)

seq1  GTTGGAACTTTAATGGGGGCTGTGTTGAATCTGTAGATTGCCTTTAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAACTTTAATGGGGGCTGTGTTGAATCTGTAGATTGCCTTTAGGAG  50

seq1  GATGGCCATTTTATTAATTCTGCTGACCCATGAGCATGGGATATCTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCATTTTATTAATTCTGCTGACCCATGAGCATGGGATATCTCTCT  100

seq1  ATTTTCTGAGATCTTATTTGATTTCTTTCTTGAGAGACTTGAAGTTATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTGAGATCTTATTTGATTTCTTTCTTGAGAGACTTGAAGTTATTG  150

seq1  TCATAAAGGTCTTTAATTTGTTTGGCTAGAGTTACCCCAAGATGAAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAGGTCTTTAATTTGTTTGGCTAGAGTTACCCCAAGATGAAGTCA  200

seq1  AGATTCTGACATTAAGCATGCTAGAGTTCTGTAGTGTCTCATTTACTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTGACATTAAGCATGCTAGAGTTCTGTAGTGTCTCATTTACTTTC  250

seq1  CTCACTGTCTATCACACCAAAAAAAAGTTCATGGTGGCCACAGAAGTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGTCTATCACACCAAAAAAAAGTTCATGGTGGCCACAGAAGTATC  300

seq1  CTTAATCTTGGTCTCCAGTGAAATGTACTAAAGTCTATCTTTTTACCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATCTTGGTCTCCAGTGAAATGTACTAAAGTCTATCTTTTTACCTAA  350

seq1  GTACTATATCATTTTAAGTCAGGAAATCTTTGCCTGAACTCAGAGATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATATCATTTTAAGTCAGGAAATCTTTGCCTGAACTCAGAGATAAA  400

seq1  ACTCACACTAGATGAAATAGAGTATATTCATATTAATGTTTTGTGTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACACTAGATGAAATAGAGTATATTCATATTAATGTTTTGTGTTTCC  450

seq1  TACACATGGAACTACATGGAACAAATGTAGCAAATCTGTATCACTTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATGGAACTACATGGAACAAATGTAGCAAATCTGTATCACTTTTCA  500

seq1  ATTTAGATATTACATCTCAATATAGAATTC  530
      ||||||||||||||||||||||||||||||
seq2  ATTTAGATATTACATCTCAATATAGAATTC  530