BAC Information

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BAC

Clone NameB6Ng01-028I17
Chromosome7 (Build37)
Map Location 14,364,187 - 14,365,031
singlet/doubletsinglet
Overlap geneLOC100043194
Upstream geneEG232875, LOC100043128, LOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267, LOC100042624
Downstream geneSult2a1, EG620627, EG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028I17.bB6Ng01-028I17.g
ACCDH858993DH858994
length1,0751,182
definitionDH858993|Mus musculus domesticus DNA, BAC clone: B6Ng01-028I17, 5' end.DH858994|Mus musculus domesticus DNA, BAC clone: B6Ng01-028I17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgacacactcagaaaagagagagtgtgctgaatatgaatgtc
acaaatcgaacaccagtcttatataatacagaaaagaaaggagtagggtg
tcacagcaggcaaagtacattgaagtatctgacacaaaacagaaattcct
caaaagacttacaggaactagattatatttacagtaaagataaaacagac
ctgcctagagtcagctaatgtcaggtaaagacttcacaacctagtcacaa
tttctgctactcctttgagccttgtgaaagctaacaccaagggtttctgt
tgtagcagaccttctcatgaataatgcaataccaccacccttctatatcc
taggccttggtaaattcttgcatatgagtgtaacttgactgttcttttaa
gtgtctgtagggaatatccatttgtcagaagaattcaccaacttgcttct
aatatgcaatctagtctgctatacctggttgtaatgaagattctaaatat
actttgctaaccttaccctgagacttctaactcttatacagtaaaatacc
ttaagaaagcatgcaagaccctccacaatattgcagagagaaatctggtg
cattctagttatggggatgccaatgttccaggaggctctttccttgaaac
tgtgcctcagaactgcttccagatttctaaacctgtaatgtgagtcactg
ctggagtggatgtagcatattaactgggtgatcattatcaagcagaaggt
aaaagcttatgataggatgaactagtgcagtgttacgaccattattaatc
cacctatgtatcttctttcacgttttacaggtacaactggggactggaag
aatcacttcacagtagcccaagctgaagccttcgataaagttttcaggag
aaaatggccggattcccccagggatgttcccatgggaataagttttcaaa
cttttgaatatatatgaacactgatgtttatgttctgtgttctgtatctt
gaatactagatgtggtcatagataaatcctgttctgatggaggtgaattt
taatgctagtgttactaatatagta
gaattctcacatgaggtataccgaatggctgagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaagacaaccctgagt
ttccacctaacaccagtcagaatggctaatatcaaatattcaggggacag
cagatgctggcaaggatgttcagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctc
agaaaattggacatagtactactggaggatcccgcaaaacttctcctggg
catatatccagaagatgttccaaccggtaagaaggacacatgctccactg
tgtcaatagcagccttatttataatagccataaggttgaaagaacccaga
tgcccctcaacagaggaatgaatacagaaaatgtggtatatttacacaat
ggagtactactcagctatgaaaaaatgaatttatgaaattcctaggcaaa
tggattgatctggagggcatcatcctgagtgaggtaacccaatcacaaag
gaactcatatacatatatactcactgataagtggatattagccttaggat
acccaagatataagatacaatttgctaaacgcatgaaactgaagaagatt
aaagaccaaagtgtggacactttgccccttcatagaatttggaacaaaac
acctatggaaggagttacagagacaaggtttggagctgagatgaatggat
ggaccatctagagactgccatatccggggatccatcccataatcagcttc
caaacgctgacaccattgcatacactagcaagtttttattgaaaggaccc
agatagagctgtctctgtgagactatgctggggcctagaaaacacaaagt
gtatgctcacagtcagttattggatggatcacaggtccccgatggaggag
ctagagaaagtactcaaggagtaaagggatctgcagtcctataggtggaa
caacaatatgaattaaccagaacgaccccccccttcagctcatgactcta
gctgcatatgaaatcaaagaatgggctagttggcctaatgggaaagaaag
gaccatgggtcatgccactcttatatgcctcagtaaggaaagaacaggga
ctaagaggtgtgtggtgagggtgggcattagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_14364187_14365031
seq2: B6Ng01-028I17.b_273_1115

seq1  TTCACAACCTAGTCAC-ATTTGTCCTTCTCCTTTGAGCCTTGTGAAAGCT  49
      |||||||||||||||| |||| | || |||||||||||||||||||||||
seq2  TTCACAACCTAGTCACAATTTCTGCTACTCCTTTGAGCCTTGTGAAAGCT  50

seq1  AGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTCATGAATAATGCAATAC  99
      | ||||| ||| ||||| | ||||||||||||||||||||||||||||||
seq2  AACACCAAGGGTTTCTGTTGTAGCAGACCTTCTCATGAATAATGCAATAC  100

seq1  CACAACCCTACTATTTCCTAGGCATTGGTACATTCTTGCATATGAGTGTA  149
      ||| ||||| |||| |||||||| |||||| |||||||||||||||||||
seq2  CACCACCCTTCTATATCCTAGGCCTTGGTAAATTCTTGCATATGAGTGTA  150

seq1  ACTTGGCTGTTTATTAAAGTATCTGTAGGGAATCTCCATTTATCAGAAGA  199
      ||||| |||||  || |||| |||||||||||| ||||||| ||||||||
seq2  ACTTGACTGTTCTTTTAAGTGTCTGTAGGGAATATCCATTTGTCAGAAGA  200

seq1  ATTCACCAACTTGCTTCTAATATGCAATGTAGTCTGCTGTACCTGGCTGT  249
      |||||||||||||||||||||||||||| ||||||||| ||||||| |||
seq2  ATTCACCAACTTGCTTCTAATATGCAATCTAGTCTGCTATACCTGGTTGT  250

seq1  AATGAAGAGTCTAAGTATACTTTGCTAAGCTTGCTCTGAGACTTCTAAAT  299
      |||||||| ||||| ||||||||||||| ||| | ||||||||||||| |
seq2  AATGAAGATTCTAAATATACTTTGCTAACCTTACCCTGAGACTTCTAACT  300

seq1  CTTATCCAGTAAAATACCTTAAGAAAGCATGCAAGACCCTCCACAATATT  349
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATACAGTAAAATACCTTAAGAAAGCATGCAAGACCCTCCACAATATT  350

seq1  GCAGACACAAATCTGGGGCATTCTAGCTATGGGAATGCCAAGGTTCCAGG  399
      ||||| | |||||||| ||||||||| |||||| ||||||| ||||||||
seq2  GCAGAGAGAAATCTGGTGCATTCTAGTTATGGGGATGCCAATGTTCCAGG  400

seq1  AGGCTCTTTCCT-----GTTTTC-------CGGCTTCCAGATTTCTAAAC  437
      ||||||||||||      | | |       | ||||||||||||||||||
seq2  AGGCTCTTTCCTTGAAACTGTGCCTCAGAACTGCTTCCAGATTTCTAAAC  450

seq1  CTGTAATGTGAGTCACTGCTGGAGTGGATGTAGCATATTAACTGGGTGAT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATGTGAGTCACTGCTGGAGTGGATGTAGCATATTAACTGGGTGAT  500

seq1  CATTATCAAACAGAAGGTAAAAGCTTATGAAGGGATGAGCTAGTGCAGTG  537
      ||||||||| ||||||||||||||||||||  |||||| |||||||||||
seq2  CATTATCAAGCAGAAGGTAAAAGCTTATGATAGGATGAACTAGTGCAGTG  550

seq1  TTACATCCATTATTAATCCACCTATGTATCTTC-TTCACATTTTACAGGT  586
      ||||  ||||||||||||||||||||||||||| ||||| ||||||||||
seq2  TTACGACCATTATTAATCCACCTATGTATCTTCTTTCACGTTTTACAGGT  600

seq1  ACAACTGGGGACTGGAAGAATCACTTCACAGTAGCCCAAGCTGAAGCCTT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGGGGACTGGAAGAATCACTTCACAGTAGCCCAAGCTGAAGCCTT  650

seq1  CGATAAAGTTTTCCAGGAGAAAATGGCCGGATTCCCCCCAGGGATGTTCC  686
      |||||||||||| |||||||||||||||||||| ||||||||||||||||
seq2  CGATAAAGTTTT-CAGGAGAAAATGGCCGGATT-CCCCCAGGGATGTTCC  698

seq1  CATGGGAATAAATTTTCAAAACTTTTGAATATTATATGAACACTGATGTT  736
      ||||||||||| ||||| ||||||||||||| ||||||||||||||||||
seq2  CATGGGAATAAGTTTTC-AAACTTTTGAATA-TATATGAACACTGATGTT  746

seq1  TATGTTCCTGTTGTTCTATATCTTGAATACCTGAATATGGTCATAGAATA  786
      |||||| ||| |||||| ||||||||||| ||  || ||||||||| |||
seq2  TATGTT-CTG-TGTTCTGTATCTTGAATA-CTAGATGTGGTCATAG-ATA  792

seq1  AAACCTGTTGTGGAATTGTGAGGGTGATTTTTTTAAAGCTAGTGTTACTA  836
      || |||||| ||      ||  |||||   |||||| |||||||||||||
seq2  AATCCTGTTCTG-----ATGGAGGTGA--ATTTTAATGCTAGTGTTACTA  835

seq1  ATACTAGTA  845
      ||| |||||
seq2  ATA-TAGTA  843