BAC Information

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BAC

Clone NameB6Ng01-029C10
Chromosome7 (Build37)
Map Location 86,527,892 - 86,700,044
singlet/doubletdoublet
Overlap geneRlbp1, BC025462, Polg, AI854517
Upstream geneNtrk3, Mrpl46, Mrps11, Det1, Isg20l1, Isg20, Acan, Hapln3, Mfge8, Abhd2
Downstream geneRhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2, 2610034B18Rik, Zfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029C10.bB6Ng01-029C10.g
ACCDH859433DH859434
length1,121887
definitionDH859433|Mus musculus domesticus DNA, BAC clone: B6Ng01-029C10, 5' end.DH859434|Mus musculus domesticus DNA, BAC clone: B6Ng01-029C10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,698,909 - 86,700,044)(86,527,892 - 86,528,779)
sequence
gaattcttgctcagaaatgacctccaggtttccagtctccaaaggcatac
cttctctcaacttccctgtggagagggaaaataagttcgagtgagacctc
tgctttagctattcccttaagtcccccgtgggagtcctccttggatcaac
actagtgccacagtgctaagcccgccacaaagtaagacttctcggctaat
gtccagcttagcacatgactactccctggccagcacactctctccatctt
tccccaccccggggaacttagtgctgatgctcacttcgtccttagaagtc
tctgaaactgagcaggcctccacgttggaacgtgtctacccttaggaaac
agtgggtcatgcccacagacacagtcatgcccagcccagagattcttggt
gtggcttcagtcctccgaggaaaccttcctgtctccatcattcagagaag
tcagtttctcttgaatggtctcaatcttagtttccctacttttgaaatag
aggacaaccaagtccctctccggaagaaaccagaaatgaactactggtca
cagggttctcttggaaacctgaagatgtctacacctgaagatgcctagag
gaagcctttcttcaacccccagccaagctattttccagaatctttccaga
cccttctgacttctgctgagccccaagcaaccatttctcatctgtaaaac
aggaaatcccattttacagctgggaaaagtaaggcctgaagttcaactgt
cctacctttctctacttccttaaaccaagacctctggtgagggacctcag
cattcagccagtcaccatagatgcccctggtcaccccctcagaactgtta
ttgttgccattttgagacaaggtttcattacatgggccagatgggtctca
aactcctgcctcctttttcaagtgctgggatttaccggcattgtaccact
atgtatttattttcatacatttattttcataattgaaagaggtgtaagga
ctatgagactttgctcactgccacaggaacaagaatgttcagctgccctt
catcaaacacattggcctcttcacaacactcttcagagagtgaggctttc
ctgatggagaatagacaaaat
gaattcagatgtggacgacctgagagcacttgttgatggatatagcggtc
tgtgcagagatgagagcctgaagctgaactcacccacttcccatctttgc
cccagcaaccctaagacagctgccagctccggcagagtgcaccctgatca
ctctgagctagtctaacagtcatcgttcacaggcacagaaagaagccagg
cccagagaaggaaaactgtttgctcaaggtcacacagttggtttatggct
ggtcctagaacttgagcctggtgcttttctattggggacaatgtaccctt
gtttacttgggccacttctgaagcagtgttctttatatctgagtctagga
tggcccctgggccataagctccaggctggagtctaagcctaaggtggtct
gagtactgataaactcatcttttgcaatagctttgacttcaggattgttt
cttgaacacactagtctcgcagttccaggataacctagagattggggatg
gaccttttctaaaagacagaaaacttcatcccgtctatcccacccttgct
ggttgcttcccaggttatcccagctacactccctctctcccactctgtca
cctcaccttctgcaaagtgtggcggggcagctggctgcatgggccaaaga
caggaccatgatccttggttgtgagctgctccagttgtgctcggagctcc
tgctcctcttcaggaactatgcggaaagtgcccacctggtcggaaaggag
tcatagaaggtgggacagctcagcccttggcagccagaacaactggtaaa
tgggtttgcacagtgcctttggccagatctgtggctcatctcctcccttt
ggtaggtcggggccccagagagattgttgaggtgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_86698909_86700044
seq2: B6Ng01-029C10.b_45_1165 (reverse)

seq1  ATTTTGTCTTATGTCCTTCTCCATCTGGGAAGCCTCACTCTCCTGAAGAG  50
      |||||||||       ||||||||| || |||||||||||| ||||||||
seq2  ATTTTGTCT------ATTCTCCATCAGGAAAGCCTCACTCT-CTGAAGAG  43

seq1  TGTTTGGTGAAGAGGCCAATGTGTTTGATGAAGGGCAGCTGAACATTCTT  100
      ||||  ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTT--GTGAAGAGGCCAATGTGTTTGATGAAGGGCAGCTGAACATTCTT  91

seq1  GTTCCTGTGGCAGTGAGCAAAAGTCTTCAATAGTTCCTTACACCTCTTTC  150
      |||||||||||||||||| |||||||   |||| ||||||||||||||||
seq2  GTTCCTGTGGCAGTGAGC-AAAGTCT--CATAG-TCCTTACACCTCTTTC  137

seq1  AATTTATGAAAATAAATTGTATGAAAATAAATACATAGTGGTACAATGCC  200
      || ||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AA-TTATGAAAATAAA-TGTATGAAAATAAATACATAGTGGTACAATGCC  185

seq1  GGTAAATCCCAGCACTTGAAAAAGGAGGCAGGAGTTTGAGACCCATCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATCCCAGCACTTGAAAAAGGAGGCAGGAGTTTGAGACCCATCTGG  235

seq1  CCCATGTAATGAAACCTTGTCTCAAAATGGCAACAATAACAGTTCTGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTAATGAAACCTTGTCTCAAAATGGCAACAATAACAGTTCTGAGG  285

seq1  GGGTGACCAGGGGCATCTATGGTGACTGGCTGAATGCTGAGGTCCCTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGACCAGGGGCATCTATGGTGACTGGCTGAATGCTGAGGTCCCTCAC  335

seq1  CAGAGGTCTTGGTTTAAGGAAGTAGAGAAAGGTAGGACAGTTGAACTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTCTTGGTTTAAGGAAGTAGAGAAAGGTAGGACAGTTGAACTTCA  385

seq1  GGCCTTACTTTTCCCAGCTGTAAAATGGGATTTCCTGTTTTACAGATGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTACTTTTCCCAGCTGTAAAATGGGATTTCCTGTTTTACAGATGAG  435

seq1  AAATGGTTGCTTGGGGCTCAGCAGAAGTCAGAAGGGTCTGGAAAGATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTTGCTTGGGGCTCAGCAGAAGTCAGAAGGGTCTGGAAAGATTCT  485

seq1  GGAAAATAGCTTGGCTGGGGGTTGAAGAAAGGCTTCCTCTAGGCATCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAGCTTGGCTGGGGGTTGAAGAAAGGCTTCCTCTAGGCATCTTC  535

seq1  AGGTGTAGACATCTTCAGGTTTCCAAGAGAACCCTGTGACCAGTAGTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTAGACATCTTCAGGTTTCCAAGAGAACCCTGTGACCAGTAGTTCA  585

seq1  TTTCTGGTTTCTTCCGGAGAGGGACTTGGTTGTCCTCTATTTCAAAAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGTTTCTTCCGGAGAGGGACTTGGTTGTCCTCTATTTCAAAAGTA  635

seq1  GGGAAACTAAGATTGAGACCATTCAAGAGAAACTGACTTCTCTGAATGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACTAAGATTGAGACCATTCAAGAGAAACTGACTTCTCTGAATGAT  685

seq1  GGAGACAGGAAGGTTTCCTCGGAGGACTGAAGCCACACCAAGAATCTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAGGAAGGTTTCCTCGGAGGACTGAAGCCACACCAAGAATCTCTG  735

seq1  GGCTGGGCATGACTGTGTCTGTGGGCATGACCCACTGTTTCCTAAGGGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGCATGACTGTGTCTGTGGGCATGACCCACTGTTTCCTAAGGGTA  785

seq1  GACACGTTCCAACGTGGAGGCCTGCTCAGTTTCAGAGACTTCTAAGGACG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACGTTCCAACGTGGAGGCCTGCTCAGTTTCAGAGACTTCTAAGGACG  835

seq1  AAGTGAGCATCAGCACTAAGTTCCCCGGGGTGGGGAAAGATGGAGAGAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGCATCAGCACTAAGTTCCCCGGGGTGGGGAAAGATGGAGAGAGT  885

seq1  GTGCTGGCCAGGGAGTAGTCATGTGCTAAGCTGGACATTAGCCGAGAAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGCCAGGGAGTAGTCATGTGCTAAGCTGGACATTAGCCGAGAAGT  935

seq1  CTTACTTTGTGGCGGGCTTAGCACTGTGGCACTAGTGTTGATCCAAGGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTTGTGGCGGGCTTAGCACTGTGGCACTAGTGTTGATCCAAGGAG  985

seq1  GACTCCCACGGGGGACTTAAGGGAATAGCTAAAGCAGAGGTCTCACTCGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCCACGGGGGACTTAAGGGAATAGCTAAAGCAGAGGTCTCACTCGA  1035

seq1  ACTTATTTTCCCTCTCCACAGGGAAGTTGAGAGAAGGTATGCCTTTGGAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTTTCCCTCTCCACAGGGAAGTTGAGAGAAGGTATGCCTTTGGAG  1085

seq1  ACTGGAAACCTGGAGGTCATTTCTGAGCAAGAATTC  1136
      ||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAACCTGGAGGTCATTTCTGAGCAAGAATTC  1121

seq1: chr7_86527892_86528779
seq2: B6Ng01-029C10.g_67_953

seq1  GAATTCAGATGTGGACGACCTGAGAGCACTTGTTGATGGATATAGCGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATGTGGACGACCTGAGAGCACTTGTTGATGGATATAGCGGTC  50

seq1  TGTGCAGAGATGAGAGCCTGAAGCTGAACTCACCCACTTCCCATCTTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGAGATGAGAGCCTGAAGCTGAACTCACCCACTTCCCATCTTTGC  100

seq1  CCCAGCAACCCTAAGACAGCTGCCAGCTCCGGCAGAGTGCACCCTGATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAACCCTAAGACAGCTGCCAGCTCCGGCAGAGTGCACCCTGATCA  150

seq1  CTCTGAGCTAGTCTAACAGTCATCGTTCACAGGCACAGAAAGAAGCCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGCTAGTCTAACAGTCATCGTTCACAGGCACAGAAAGAAGCCAGG  200

seq1  CCCAGAGAAGGAAAACTGTTTGCTCAAGGTCACACAGTTGGTTTATGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGAAGGAAAACTGTTTGCTCAAGGTCACACAGTTGGTTTATGGCT  250

seq1  GGTCCTAGAACTTGAGCCTGGTGCTTTTCTATTGGGGACAATGTACCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTAGAACTTGAGCCTGGTGCTTTTCTATTGGGGACAATGTACCCTT  300

seq1  GTTTACTTGGGCCACTTCTGAAGCAGTGTTCTTTATATCTGAGTCTAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTTGGGCCACTTCTGAAGCAGTGTTCTTTATATCTGAGTCTAGGA  350

seq1  TGGCCCCTGGGCCATAAGCTCCAGGCTGGAGTCTAAGCCTAAGGTGGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCCTGGGCCATAAGCTCCAGGCTGGAGTCTAAGCCTAAGGTGGTCT  400

seq1  GAGTACTGATAAACTCATCTTTTGCAATAGCTTTGACTTCAGGATTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACTGATAAACTCATCTTTTGCAATAGCTTTGACTTCAGGATTGTTT  450

seq1  CTTGAACACACTAGTCTCGCAGTTCCAGGATAACCTAGAGATTGGGGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACACACTAGTCTCGCAGTTCCAGGATAACCTAGAGATTGGGGATG  500

seq1  GACCTTTTCTAAAAGACAGAAAACTTCATCCCGTCTATCCCACCCTTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTTCTAAAAGACAGAAAACTTCATCCCGTCTATCCCACCCTTGCT  550

seq1  GGTTGCTTCCCAGGTTATCCCAGCTACACTCCCTCTCTCCCACTCTGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTTCCCAGGTTATCCCAGCTACACTCCCTCTCTCCCACTCTGTCA  600

seq1  CCTCACCTTCTGCAAAGTGTGGCGGGGCAGCTGGCTGCATGGGCCAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCTTCTGCAAAGTGTGGCGGGGCAGCTGGCTGCATGGGCCAAAGA  650

seq1  CAGGACCATGATCCTTGGTTGTGAGCTGCTCCAGTTGTGCTCGGAGCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCATGATCCTTGGTTGTGAGCTGCTCCAGTTGTGCTCGGAGCTCC  700

seq1  TGCTCCTCTTCAGGAACCATGCGGAAAGTGCCCACCTGGTCGGAAAGGAG  750
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGCTCCTCTTCAGGAACTATGCGGAAAGTGCCCACCTGGTCGGAAAGGAG  750

seq1  TCATAGAAGGTGGGACAGCTCAGCCCTTGGCAGCCAGAACAACTGGCAAA  800
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCATAGAAGGTGGGACAGCTCAGCCCTTGGCAGCCAGAACAACTGGTAAA  800

seq1  TGGGTTTGCACAGTGCCTTTGGCCAAGATCTGT-GCTCAGTCTCCTCCCT  849
      |||||||||||||||||||||||| |||||||| ||||| ||||||||||
seq2  TGGGTTTGCACAGTGCCTTTGGCC-AGATCTGTGGCTCA-TCTCCTCCCT  848

seq1  TTGGTAGGTCGGGGCCCCAGAGAGATTGTTGAGGTGTGG  888
      |||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGGTCGGGGCCCCAGAGAGATTGTTGAGGTGTGG  887