BAC Information

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BAC

Clone NameB6Ng01-029G06
Chromosome7 (Build37)
Map Location 115,509,322 - 115,684,667
singlet/doubletdoublet
Overlap geneOlfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980
Upstream geneSyt9, Olfml1, Ppfibp2, 5330417H12Rik, Cyb5r2, Ovch2, LOC100042310, Olfr467, Olfr468-ps1, Olfr469, GA_x5J8B7W6B6J-2580381-2580079, Olfr470, Olfr471, LOC626661, Olfr472, Olfr473, LOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493
Downstream geneOlfr503, Olfr504, Olfr505-ps1, Olfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513, Olfr514, Olfr515-ps1, Olfr516, Olfr517, Olfr518, Olfr519, Nlrp10, Eif3s5, BC049265, Tub, Ric3, Lmo1, Stk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029G06.bB6Ng01-029G06.g
ACCDH859604DH859605
length1,1291,025
definitionDH859604|Mus musculus domesticus DNA, BAC clone: B6Ng01-029G06, 5' end.DH859605|Mus musculus domesticus DNA, BAC clone: B6Ng01-029G06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,509,322 - 115,510,471)(115,683,637 - 115,684,667)
sequence
gaattcattctgacacactccacttagaaaacactgtgacactgggtaag
gagttgatatatctaaataagttattactagtaatatgctaaatatttat
attttatacgatggtaaaattaatatttcaaattactttaaagaacaatg
attcatttagaagaatttaaaacatttaatgactttacaactggaggtca
gattggtaaatttaatgtgacgattattcagttttacagactttgtgatc
aacatcaccaacaaatcacctttctatgtattaaccatagaaaagttgaa
atgatgcccttctgtatttccctgacttgtgtatggtttgaaccacattg
tgactgttcattaataatgtgattactaacagtaaaagactgaattcaac
gtacctagttttcatatctaatactcttttgaaaatttattatttttatt
tagttcatatgaatgttgccctctgtacatacatgcaccatgtgaatgcc
tggtgcccatgaggaccagaagaaagcattgagtctgaagaactgtaaaa
tcagacttctgtgaataaccagtggttgctgggaatcagactcaggcagg
tcctctgcaagtgcagccagtgtgcttagccaagagcaaactctgaattc
cacaacattttacttcatatttataactttactcaaataaaagtgtttcc
tactgtaaaatggaaattataaaagacttaactgcaagttgaaggctggt
gacacagatctttaatattggcactcaggaagcagatacaggaagttctc
tgtgaattcaagaccagcctggtctatatagcaagaaagccagaactaca
catggaaatcctattttgaaaactgaaaaagtaaagaagtatttatattt
aataaaaataaaatatacaaatatattttcaacattcctatgatggtgat
aagtagcagtcaataaatttagcaggactagtcttcatggtatatcccat
aatttatattttaatcatctgtatatagcatttctatttggaaaggcttg
tatatttttatgttattatcctttatttctgtgaaagaaatggttctggt
aactagcatagctgtttcaagacagcatg
gaattcatgagaattctaagagctatgagttggttctacagtccttgggc
aacctaccaggaagtgcttccctttctcaaaaaaaaaaaaaaaaaaaaaa
aaagaaaaaatatccttctccctgcagtcaaagctggggctctgggctgg
agttgggtggggagggacagagggaggcttttagctattgtatagtcttt
gcccaacaggcactcaaaccctcaatccatagggcccagagttgaggctg
cttgcagttggataggacctccgtaggacctcccataggaccttcaaaca
acctttactgagcagactccaaagcaaagaaggaaatctacctggccttg
tgaaagaaactctgactaggtatccagagcagcccagctggctcccattt
ccctcactcccaacagcattataattacttcaaagacaaatgatttccct
tagaactattgtcaaccaagttcatataaattccattaatttattagaaa
ttttgtcaactcccattggtctttgtcacttgtcattgccaaggatgggg
aatcagacgtgccatgcacttccgacaggagcttagacataaacagctct
ttctgtgtatcttgtatataatttgaggggcagttttaatcccttatttc
tgtgagattacatcattacacccatagcactgtcacagtggtttgtagat
tgtgatccaatccttccatttcaaagacatgtatgtgatcactttatgta
tcctcctaaattacaggtcatcctccctaataattgcagagattattaga
gtacagagtcaggataccaaatctcaaaatgcacattaggtgacctaatt
tagactttagcttgttaatgacaataaaatgtgttttcacctgttgaatg
ttgccatcatcaatgagattatgtagtagaaaaagcaaaccttctttctt
ctaaattctttgtcaaaggtaaatttcaggaaaattataactaaattgaa
aaacaaaactagtatcttcttgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_115509322_115510471
seq2: B6Ng01-029G06.b_44_1172

seq1  GAATTCATTCTGACACACTCCACTTAGAAAACACTGTGACACTGGGTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTGACACACTCCACTTAGAAAACACTGTGACACTGGGTAAG  50

seq1  GAGTTGATATATCTAAATAAGTTATTACTAGTAATATGCTAAATATTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGATATATCTAAATAAGTTATTACTAGTAATATGCTAAATATTTAT  100

seq1  ATTTTATACGATGGTAAAATTAATATTTCAAATTACTTTAAAGAACAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATACGATGGTAAAATTAATATTTCAAATTACTTTAAAGAACAATG  150

seq1  ATTCATTTAGAAGAATTTAAAACATTTAATGACTTTACAACTGGAGGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTAGAAGAATTTAAAACATTTAATGACTTTACAACTGGAGGTCA  200

seq1  GATTGGTAAATTTAATGTGACGATTATTCAGTTTTACAGACTTTGTGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGTAAATTTAATGTGACGATTATTCAGTTTTACAGACTTTGTGATC  250

seq1  AACATCACCAACAAATCACCTTTCTATGTATTAACCATAGAAAAGTTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCACCAACAAATCACCTTTCTATGTATTAACCATAGAAAAGTTGAA  300

seq1  ATGATGCCCTTCTGTATTTCCCTGACTTGTGTATGGTTTGAACCACATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCCCTTCTGTATTTCCCTGACTTGTGTATGGTTTGAACCACATTG  350

seq1  TGACTGTTCATTAATAATGTGATTACTAACAGTAAAAGACTGAATTCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTTCATTAATAATGTGATTACTAACAGTAAAAGACTGAATTCAAC  400

seq1  GTACCTAGTTTTCATATCTAATACTCTTTTGAAAATTTATTATTTTTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTAGTTTTCATATCTAATACTCTTTTGAAAATTTATTATTTTTATT  450

seq1  TAGTTCATATGAATGTTGCCCTCTGTACATACATGCACCATGTGAATGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCATATGAATGTTGCCCTCTGTACATACATGCACCATGTGAATGCC  500

seq1  TGGTGCCCATGAGGACCAGAAGAAAGCATTGAGTCTGAAGAACTGTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCCCATGAGGACCAGAAGAAAGCATTGAGTCTGAAGAACTGTAAAA  550

seq1  TCAGACTTCTGTGAATAACCAGTGGTTGCTGGGAATCAGACTCAGGCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTTCTGTGAATAACCAGTGGTTGCTGGGAATCAGACTCAGGCAGG  600

seq1  TCCTCTGCAAGTGCAGCCAGTGTGCTTAGCCAAGAGCAAACTCTGAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGCAAGTGCAGCCAGTGTGCTTAGCCAAGAGCAAACTCTGAATTC  650

seq1  CACAACATTTTACTTCATATTTATAACTTTACTCAAATAAAAGTGTTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACATTTTACTTCATATTTATAACTTTACTCAAATAAAAGTGTTTCC  700

seq1  TACTGTAAAATGGAAATTATAAAAGACTTAACTGCAAGTTGAAGGCTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTAAAATGGAAATTATAAAAGACTTAACTGCAAGTTGAAGGCTGGT  750

seq1  GACACAGATCTTTAATATTGGCACTCAGGAAGCAGATACAGGAAGTTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGATCTTTAATATTGGCACTCAGGAAGCAGATACAGGAAGTTCTC  800

seq1  TGTGAATTCAAGACCAGCCTGGTCTATATAGCAAGAAAGCCAGAACTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATTCAAGACCAGCCTGGTCTATATAGCAAGAAAGCCAGAACTACA  850

seq1  CATGGAAATCCTATTTTGAAAAACTGAAAAAGTAAAAGAAGTAATTAATA  900
      |||||||||||||||||| |||||||||||||| |||||||| ||| |||
seq2  CATGGAAATCCTATTTTG-AAAACTGAAAAAGT-AAAGAAGT-ATTTATA  897

seq1  TTTAATAAAAATAAAAATATACAAATATATTTTCAACATTCCTATGATGG  950
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTAATAAAAAT-AAAATATACAAATATATTTTCAACATTCCTATGATGG  946

seq1  TGATTAAGTAAGCAGTCAAATAAATTTAGCAAGGACTAAGTCTTCATGGT  1000
      ||| ||||| ||||||| |||||||||||| |||||| ||||||||||||
seq2  TGA-TAAGT-AGCAGTC-AATAAATTTAGC-AGGACT-AGTCTTCATGGT  991

seq1  ATAATCCCATAATTTTATATTTTAATCATCTGTTATAATAAGCATTTCTA  1050
      || ||||||||| ||||||||||||||||||| ||||   ||||||||||
seq2  AT-ATCCCATAA-TTTATATTTTAATCATCTG-TATA--TAGCATTTCTA  1036

seq1  TTTTGAAAAGGCTTGTATATTTTTATGTTAATTTATCCCTTTATTTCTGT  1100
       |||| ||||||||||||||||||||||||  |||| |||||||||||||
seq2  -TTTGGAAAGGCTTGTATATTTTTATGTTA--TTAT-CCTTTATTTCTGT  1082

seq1  GAAGAGAATGGTTCTGGTAACATAGCATAGCTGTTTCAAAGGACAGCATG  1150
      |||   ||||||||||||||| |||||||||||||||||  |||||||||
seq2  GAAAGAAATGGTTCTGGTAAC-TAGCATAGCTGTTTCAA--GACAGCATG  1129

seq1: chr7_115683637_115684667
seq2: B6Ng01-029G06.g_68_1092 (reverse)

seq1  TCACAAAGAAGATACATGTTTTGTTTTTCATATTTAGTTCTAATGTTTTC  50
      |||| ||||||||||  ||||||||||||| |||||||| |||  |||||
seq2  TCAC-AAGAAGATACTAGTTTTGTTTTTCA-ATTTAGTTATAA--TTTTC  46

seq1  CTGAAATTTACCTTTGGCCAAAGGAATTTAAGAAGAAAGAAGGTTTGCTT  100
      |||||||||||||||| |  || |||||| ||||||||||||||||||||
seq2  CTGAAATTTACCTTTGAC--AAAGAATTT-AGAAGAAAGAAGGTTTGCTT  93

seq1  TTTCTACTACAT-ATCTCATTGATG-TAGCAACATTCAACA-GTGAAAAC  147
      |||||||||||| |||||||||||| | ||||||||||||| ||||||||
seq2  TTTCTACTACATAATCTCATTGATGATGGCAACATTCAACAGGTGAAAAC  143

seq1  ACA-TTTATTGTCATTGAACAAGCTAAAGTCTAAATTAGGTCACCTAATG  196
      ||| |||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACATTTTATTGTCATT-AACAAGCTAAAGTCTAAATTAGGTCACCTAATG  192

seq1  TGCATTTTGAGATTTGGTATCCTGACTCTGTACTCTAATAATCTCTGCAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTTGAGATTTGGTATCCTGACTCTGTACTCTAATAATCTCTGCAA  242

seq1  TTATTAGGGAGGATGACCTGTAATTTAGGAGGATACATAAAGTGATCACA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGGGAGGATGACCTGTAATTTAGGAGGATACATAAAGTGATCACA  292

seq1  TACATGTCTTTGGAATTGGAAGGATTGGATCACAATCTACAAACCACTGT  346
      ||||||||||| ||| ||||||||||||||||||||||||||||||||||
seq2  TACATGTCTTT-GAAATGGAAGGATTGGATCACAATCTACAAACCACTGT  341

seq1  GACAGTGCTATGGGTGTAATGATGTAATCTCACAGAAATTAAGGGATTAA  396
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GACAGTGCTATGGGTGTAATGATGTAATCTCACAGAAA-TAAGGGATTAA  390

seq1  AACTGCCCCTCAAATTATATACAAGATACACAGAAAGAGCTGTTTATGTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCCCTCAAATTATATACAAGATACACAGAAAGAGCTGTTTATGTC  440

seq1  TAAGCTCCTGTCGGAAGTGCATGGCACGTCTGATTCCCCATCCTTGGCAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCCTGTCGGAAGTGCATGGCACGTCTGATTCCCCATCCTTGGCAA  490

seq1  TGACAAGTGACAAAGACCAATGGGAGTTGACAAAATTTCTAATAAATTAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGTGACAAAGACCAATGGGAGTTGACAAAATTTCTAATAAATTAA  540

seq1  TGGAATTTATATGAACTTGGTTGACAATAGTTCTAAGGGAAATCATTTGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTTATATGAACTTGGTTGACAATAGTTCTAAGGGAAATCATTTGT  590

seq1  CTTTGAAGTAATTATAATGCTGTTGGGAGTGAGGGAAATGGGAGCCAGCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAGTAATTATAATGCTGTTGGGAGTGAGGGAAATGGGAGCCAGCT  640

seq1  GGGCTGCTCTGGATACCTAGTCAGAGTTTCTTTCACAAGGCCAGGTAGAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGCTCTGGATACCTAGTCAGAGTTTCTTTCACAAGGCCAGGTAGAT  690

seq1  TTCCTTCTTTGCTTTGGAGTCTGCTCAGTAAAGGTTGTTTGAAGGTCCTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCTTTGCTTTGGAGTCTGCTCAGTAAAGGTTGTTTGAAGGTCCTA  740

seq1  TGGGAGGTCCTACGGAGGTCCTATCCAACTGCAAGCAGCCTCAACTCTGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGTCCTACGGAGGTCCTATCCAACTGCAAGCAGCCTCAACTCTGG  790

seq1  GCCCTATGGATTGAGGGTTTGAGTGCCTGTTGGGCAAAGACTATACAATA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTATGGATTGAGGGTTTGAGTGCCTGTTGGGCAAAGACTATACAATA  840

seq1  GCTAAAAGCCTCCCTCTGTCCCTCCCCACCCAACTCCAGCCCAGAGCCCC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAAGCCTCCCTCTGTCCCTCCCCACCCAACTCCAGCCCAGAGCCCC  890

seq1  AGCTTTGACTGCAGGGAGAAGGATATTTTTTCTTTTTTTTTTTTTTTTTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGACTGCAGGGAGAAGGATATTTTTTCTTTTTTTTTTTTTTTTTT  940

seq1  TTTTTTTGAGAAAGGGAAGCACTTCCTGGTAGGTTGCCCAAGGACTGTAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGAGAAAGGGAAGCACTTCCTGGTAGGTTGCCCAAGGACTGTAG  990

seq1  AACCAACTCATAGCTCTTAGAATTCTCATGAATTC  1031
      |||||||||||||||||||||||||||||||||||
seq2  AACCAACTCATAGCTCTTAGAATTCTCATGAATTC  1025