BAC Information

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BAC

Clone NameB6Ng01-029L13
Chromosome7 (Build37)
Map Location 82,109,800 - 82,110,964
singlet/doubletsinglet
Overlap genenone
Upstream geneSt8sia2, LOC100042127, LOC100042140, LOC546979, Slco3a1, EG665308, EG665641, 0610006L08Rik
Downstream geneSv2b, 1500012K07Rik, LOC100042171, Akap13, Klhl25, LOC100042210
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029L13.bB6Ng01-029L13.g
ACCDH859842DH859843
length1,1661,159
definitionDH859842|Mus musculus domesticus DNA, BAC clone: B6Ng01-029L13, 5' end.DH859843|Mus musculus domesticus DNA, BAC clone: B6Ng01-029L13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagccacagagataccaatacgatgtggctgaatgattaacctt
ccttgtttgtcctcatagttacattatccactggatgtcctagaaaaaca
cagcgtccgtctgtaactgccatatctgagctggtctgcttatgccaggt
aggactcacagtttatctttctcccaacttactttctttgaattcaataa
aagcatggtttttgttgttgttgttgttttttgtttgtttgtttttttcc
ttcctagaaagatttctcttaaagtcagggtaaatgatgtaattcaatgg
aatcagagttctgagatttggtgcagaattctgttggtaaccctctcaaa
cttttgtgacaaccatcctaagtctaacttgacctttcaatggctagggt
gagatgggtagcagaaggaaagaagatggggtcaggggtggtagaaagag
aactatgtaatattagtaacgtaataaaaaatgctgtcaaaatccttcca
gaatgtttgtttaaaatgtgtgtatgtgtatgactgtatgacttgtgtgt
agtgtatgtgcaagtacatgtagtgcatgcatgtgtgcacttgggtgcac
atgcacacgtggaggcaatagtttaatgtcatgtatcttccttggattct
ctctgctatatttttattttgtcttatttacttaaaatataactaatttc
tccctcttctcaaacatttccacatcacttcccattttctttcaaaacca
ttgccttttaaaattactagtattttacacacacacacacacacacacac
acacacacacacacacacagagttacacaatatacacatgtgaatatata
tacatatatatatatatatatatatatatatatatatacatacaccctca
cacccccacacccacacccacccacacccacatatatatgtatattgtat
atgtatatatatacacaacttagtgagtatggataagttttttggctaac
tatttggtataagatagccattagaggggctcattcctgggaaatacaaa
ttctctttcctctcactattgttaatggctttttagaatttttaccatgg
ggtggggcaccaaaggactttcccatcaatggtggaatgtcaccttgatt
tatcatggttcgatct
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaattcaggtaacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
gcattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggatgatccagcaattcctctcctgggc
atatatccagaagatgtcccaaccgggaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagatgctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttatacaatg
gaatactacttagctattaaaaaatgaatttatgaaattcctaggcaaat
ggatggacctggagggcatcatcctgagtgaggtaacccaaacacaaagg
aactcgcacaatatgtactcactgataagtggatattagcccagaaactt
aggatacccaagatataagatacaatttgctaaacacatgaaattcaaga
agaacgaagaccaacgtgtggacactttgccccttcttagaaatgggaac
aaaacacccattgaaggagttacagagacaaaatttggagctgtgacgaa
aggatggaccatctagtgattgccatatgcatggatccatcccatagtca
gctcacaaacgctgacaccattgcatacactagcaagattttgctgaaag
gacccagatatagctgtctcttgtgagactatgccggggtctagcaaaca
cagaagtgtatgatcacactcagctatggatgggtcacatgtccccaatg
gaggagctagagaaattactcaggagctaaaggaaactgcaccctatagt
ggacaacattatgactaacataccctggagctcttgactctagctgcata
tgtatcaaagatggctatccgcatcctgcaagaaggccattggacttgcc
aactgtaatgttcatacaggatcctaggcctaccgcggaatgggtgtggt
agtgatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_82109800_82110964
seq2: B6Ng01-029L13.b_47_1212 (reverse)

seq1  AGATCTGAACAATGATAATACAAGGTGACATACCACCATTGATGGGGAAG  50
      ||||| |||| |||||||  ||||||||||| |||||||||||||| |||
seq2  AGATC-GAACCATGATAAATCAAGGTGACATTCCACCATTGATGGGAAAG  49

seq1  TTCATTGGTGCCCCACCCATAGGTAAAAA-TCT-AAAAGCAATTAACAAT  98
      | | ||||||||||||||   |||||||| ||| |||||| |||||||||
seq2  TCCTTTGGTGCCCCACCCCATGGTAAAAATTCTAAAAAGCCATTAACAAT  99

seq1  AGCTGAGA-GAAGGAGAATTTGTATTTCCCAGGGATGAGCCCCT-AAATG  146
      || ||||| ||| |||||||||||||||||||| ||||||||||  ||||
seq2  AG-TGAGAGGAAAGAGAATTTGTATTTCCCAGGAATGAGCCCCTCTAATG  148

seq1  GCTATCTAATACCAAATAGTTAGCCCAAAAAACTTATCCATACTCAACTA  196
      ||||||| ||||||||||||||| ||||||||||||||||||||| ||||
seq2  GCTATCTTATACCAAATAGTTAG-CCAAAAAACTTATCCATACTC-ACTA  196

seq1  AGTTGTGTATATATATACATATAC-ATATACATATATATGTGGGTGTGGG  245
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGTTGTGTATATATATACATATACAATATACATATATATGTGGGTGTGGG  246

seq1  TGGGTGTGGGTGTGGGGGTGTGAGGGTGTATGTATATATATATATATATA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTGGGTGTGGGGGTGTGAGGGTGTATGTATATATATATATATATA  296

seq1  TATATATATATATATATGTATATATATTCACATGTGTATATTGTGTAACT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATGTATATATATTCACATGTGTATATTGTGTAACT  346

seq1  CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAATA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAATA  396

seq1  CTAGTAATTTTAAAAGGCAATGGTTTTGAAAGAAAATGGGAAGTGATGTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAATTTTAAAAGGCAATGGTTTTGAAAGAAAATGGGAAGTGATGTG  446

seq1  GAAATGTTTGAGAAGAGGGAGAAATTAGTTATATTTTAAGTAAATAAGAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTTTGAGAAGAGGGAGAAATTAGTTATATTTTAAGTAAATAAGAC  496

seq1  AAAATAAAAATATAGCAGAGAGAATCCAAGGAAGATACATGACATTAAAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAATATAGCAGAGAGAATCCAAGGAAGATACATGACATTAAAC  546

seq1  TATTGCCTCCACGTGTGCATGTGCACCCAAGTGCACACATGCATGCACTA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCCTCCACGTGTGCATGTGCACCCAAGTGCACACATGCATGCACTA  596

seq1  CATGTACTTGCACATACACTACACACAAGTCATACAGTCATACACATACA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACTTGCACATACACTACACACAAGTCATACAGTCATACACATACA  646

seq1  CACATTTTAAACAAACATTCTGGAAGGATTTTGACAGCATTTTTTATTAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTTAAACAAACATTCTGGAAGGATTTTGACAGCATTTTTTATTAC  696

seq1  GTTACTAATATTACATAGTTCTCTTTCTACCACCCCTGACCCCATCTTCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTAATATTACATAGTTCTCTTTCTACCACCCCTGACCCCATCTTCT  746

seq1  TTCCTTCTGCTACCCATCTCACCCTAGCCATTGAAAGGTCAAGTTAGACT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCTGCTACCCATCTCACCCTAGCCATTGAAAGGTCAAGTTAGACT  796

seq1  TAGGATGGTTGTCACAAAAGTTTGAGAGGGTTACCAACAGAATTCTGCAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATGGTTGTCACAAAAGTTTGAGAGGGTTACCAACAGAATTCTGCAC  846

seq1  CAAATCTCAGAACTCTGATTCCATTGAATTACATCATTTACCCTGACTTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCTCAGAACTCTGATTCCATTGAATTACATCATTTACCCTGACTTT  896

seq1  AAGAGAAATCTTTCTAGGAAGGAAAAAAACAAACAAACAAAAAACAACAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAATCTTTCTAGGAAGGAAAAAAACAAACAAACAAAAAACAACAA  946

seq1  CAACAACAAAAACCATGCTTTTATTGAATTCAAAGAAAGTAAGTTGGGAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAAAAACCATGCTTTTATTGAATTCAAAGAAAGTAAGTTGGGAG  996

seq1  AAAGATAAACTGTGAGTCCTACCTGGCATAAGCAGACCAGCTCAGATATG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAAACTGTGAGTCCTACCTGGCATAAGCAGACCAGCTCAGATATG  1046

seq1  GCAGTTACAGACGGACGCTGTGTTTTTCTAGGACATCCAGTGGATAATGT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTACAGACGGACGCTGTGTTTTTCTAGGACATCCAGTGGATAATGT  1096

seq1  AACTATGAGGACAAACAAGGAAGGTTAATCATTCAGCCACATCGTATTGG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGAGGACAAACAAGGAAGGTTAATCATTCAGCCACATCGTATTGG  1146

seq1  TATCTCTGTGGCTAGAATTC  1165
      ||||||||||||||||||||
seq2  TATCTCTGTGGCTAGAATTC  1166