BAC Information

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BAC

Clone NameB6Ng01-029M12
Chromosome7 (Build37)
Map Location 6,132,896 - 6,264,729
singlet/doubletdoublet
Overlap geneZfp444, Galp, Zfp371, EG627821, Zfp667
Upstream geneV1rd3, EG665150, Nlrp2, EG272350, V1rd4, EG665163, V1rd10, EG630071, EG665255, EG636697, EG636705, LOC636731, LOC673215, V1rd2, LOC100041627, LOC100041637, V1rd1, LOC100041647, V1rd11, LOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787
Downstream geneZfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029M12.bB6Ng01-029M12.g
ACCDH859882DH859883
length956281
definitionDH859882|Mus musculus domesticus DNA, BAC clone: B6Ng01-029M12, 5' end.DH859883|Mus musculus domesticus DNA, BAC clone: B6Ng01-029M12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,263,976 - 6,264,729)(6,132,896 - 6,133,176)
sequence
gaattcagacaagacacaaacagcaaagtatggatagcaggtgtctgtta
aagggcaaattacagcattccaaaaggaccattgtgggtgaaagtgaaca
gaagccacagaaatcgaggcactgtttatatttctattgtctctaaaaca
atttccccaaagtaattttcaacctgggtgattgataggctcatttgagt
taactcctaaggaaagaagtaatggtatataaacccttgttccttaccaa
ctgtcttaggcttttattgctgtgaacagacaccatgatcaaaaggaact
tgttgaaaggaaaatatttaattgggactgccttatagtttcagagattt
agaccgttatcatcatggcaggaagcatggcagagtgcaggcagatatgg
tgctagaagaactgagagttctacctcttgatccacaggcagtagaaggg
gagtgtgtcctgtttgtaggcaggagaagtctattacactaggcatagct
tgagtttatatatgagacctgaaagcgcgcctccatagtgagacaattcc
tccaacaagtccacaactattccaacaagaccataactcataatagtgat
actccttatgggccaagcattcaaacacatgaatctatgggggaggggga
gcaaacttattcaaaccaccataccatcccttctggcaaattcagaatgt
catatctttacttaaggatagagatatgacttcagtcccactgttttgat
caataatcagagtcctacattttgttttctggttttacaagttgctgcta
ctgagggatgtgtccactctcaacaactttaagcctgctaacacctcact
agctacctaatattatggtgacagcactgcttctctcaagtgatgataat
aataacttttctggaaccactctatagagccatgtagtatgacaaacttt
cctagt
cctcctgaggggtgggccccaaagccaattagaaaccgtgggttacccct
gaaactgtcacgccactattgcaccagttggtgtatcttatggctaattg
ttaatgtggcaccttcttgtgtttccttagtttaatagccacaaggaaac
taggagaaaggagactgctcagccacggtagcaccagggagggaacaagg
ccaagttgtaagtctggtcggtctgctataagagagggaggggtttttgt
tctgatggtggttggtttgtttgtttgtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_6263976_6264729
seq2: B6Ng01-029M12.b_41_794 (reverse)

seq1  ATTGATCAAAACAGTGGGACTGAAGTCATATCTCTATCCTTAAGTAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCAAAACAGTGGGACTGAAGTCATATCTCTATCCTTAAGTAAAGA  50

seq1  TATGACATTCTGAATTTGCCAGAAGGGATGGTATGGTGGTTTGAATAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACATTCTGAATTTGCCAGAAGGGATGGTATGGTGGTTTGAATAAGT  100

seq1  TTGCTCCCCCTCCCCCATAGATTCATGTGTTTGAATGCTTGGCCCATAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCCCCCTCCCCCATAGATTCATGTGTTTGAATGCTTGGCCCATAAG  150

seq1  GAGTATCACTATTATGAGTTATGGTCTTGTTGGAATAGTTGTGGACTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATCACTATTATGAGTTATGGTCTTGTTGGAATAGTTGTGGACTTGT  200

seq1  TGGAGGAATTGTCTCACTATGGAGGCGCGCTTTCAGGTCTCATATATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAATTGTCTCACTATGGAGGCGCGCTTTCAGGTCTCATATATAAA  250

seq1  CTCAAGCTATGCCTAGTGTAATAGACTTCTCCTGCCTACAAACAGGACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCTATGCCTAGTGTAATAGACTTCTCCTGCCTACAAACAGGACAC  300

seq1  ACTCCCCTTCTACTGCCTGTGGATCAAGAGGTAGAACTCTCAGTTCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCTTCTACTGCCTGTGGATCAAGAGGTAGAACTCTCAGTTCTTCT  350

seq1  AGCACCATATCTGCCTGCACTCTGCCATGCTTCCTGCCATGATGATAACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCATATCTGCCTGCACTCTGCCATGCTTCCTGCCATGATGATAACG  400

seq1  GTCTAAATCTCTGAAACTATAAGGCAGTCCCAATTAAATATTTTCCTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAATCTCTGAAACTATAAGGCAGTCCCAATTAAATATTTTCCTTTC  450

seq1  AACAAGTTCCTTTTGATCATGGTGTCTGTTCACAGCAATAAAAGCCTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTTCCTTTTGATCATGGTGTCTGTTCACAGCAATAAAAGCCTAAG  500

seq1  ACAGTTGGTAAGGAACAAGGGTTTATATACCATTACTTCTTTCCTTAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGGTAAGGAACAAGGGTTTATATACCATTACTTCTTTCCTTAGGA  550

seq1  GTTAACTCAAATGAGCCTATCAATCACCCAGGTTGAAAATTACTTTGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTCAAATGAGCCTATCAATCACCCAGGTTGAAAATTACTTTGGGG  600

seq1  AAATTGTTTTAGAGACAATAGAAATATAAACAGTGCCTCGATTTCTGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTTTTAGAGACAATAGAAATATAAACAGTGCCTCGATTTCTGTGG  650

seq1  CTTCTGTTCACTTTCACCCACAATGGTCCTTTTGGAATGCTGTAATTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTTCACTTTCACCCACAATGGTCCTTTTGGAATGCTGTAATTTGC  700

seq1  CCTTTAACAGACACCTGCTATCCATACTTTGCTGTTTGTGTCTTGTCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAACAGACACCTGCTATCCATACTTTGCTGTTTGTGTCTTGTCTGA  750

seq1  ATTC  754
      ||||
seq2  ATTC  754

seq1: chr7_6132896_6133176
seq2: B6Ng01-029M12.g_72_352

seq1  CCTCCTGAGGGGTGGGCCCCAAAGCCAATTAGAAACCGTGGGTTACCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGAGGGGTGGGCCCCAAAGCCAATTAGAAACCGTGGGTTACCCCT  50

seq1  GAAACTGTCACGCCACTATTGCACCAGTTGGTGTATCTTATGGCTAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGTCACGCCACTATTGCACCAGTTGGTGTATCTTATGGCTAATTG  100

seq1  TTAATGTGGCACCTTCTTGTGTTTCCTTAGTTTAATAGCCACAAGGAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTGGCACCTTCTTGTGTTTCCTTAGTTTAATAGCCACAAGGAAAC  150

seq1  TAGGAGAAAGGAGACTGCTCAGCCACGGTAGCACCAGGGAGGGAACAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAAAGGAGACTGCTCAGCCACGGTAGCACCAGGGAGGGAACAAGG  200

seq1  CCAAGTTGTAAGTCTGGTCGGTCTGCTATAAGAGAGGGAGGGGTTTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTGTAAGTCTGGTCGGTCTGCTATAAGAGAGGGAGGGGTTTTTGT  250

seq1  TCTGATGGTGGTTGGTTTGTTTGTTTGTTTG  281
      |||||||||||||||||||||||||||||||
seq2  TCTGATGGTGGTTGGTTTGTTTGTTTGTTTG  281