BAC Information

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BAC

Clone NameB6Ng01-030B17
Chromosome7 (Build37)
Map Location 112,076,410 - 112,238,945
singlet/doubletdoublet
Overlap geneOlfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679
Upstream geneOlfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668
Downstream geneOlfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030B17.bB6Ng01-030B17.g
ACCDH860110DH860111
length1,081706
definitionDH860110|Mus musculus domesticus DNA, BAC clone: B6Ng01-030B17, 5' end.DH860111|Mus musculus domesticus DNA, BAC clone: B6Ng01-030B17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,076,410 - 112,077,497)(112,238,242 - 112,238,945)
sequence
ggaattcttagacttaaacttcttttctcatcttctgaaaataagggtca
ttagaagccacccaaacttacctcaatgctaggagagaccagagcagtgt
ccatgcccaagagcctgagcataaggggttgtacactcacacagcattgc
tgtatcattttgagtgttctccagcctggggagtatgcacttcaatgtgt
ttttgtagctcattgtctcagaagactgtaattggagagataacatcctt
tgggacttttgagataatatgagaggactgggaaatgaataggattggga
tgtatgatgtgaaattcacaaagaatcaaaattttttttgaaaaaaaata
atgaatagatatgattacatctacacaaacactcaaaagtatgttttatt
tgaatttgtatcccatacaactgcatggtatgcatgtttaagcggttgac
ttttttctttttactatttcattgtaaaaactgatactaacaatttcaaa
acaaattaaaatggagtgtgtcaaggtgtgaatgtgtgaaaaattctttt
ttaactcactttttgtttgagaatttcatgcacgcatataatgcattttg
atcaagtcgctcttcatttcctttcatagagttcttccctgtcccccata
ctaatttcctccaaattccgtgggctctctaaaaaatattttgctcttta
gcagtaccaatatgtattagagcatgcctagcctttcagagctgtattac
tgaaaaaatatctccacttccttgtcctttttttaattaggtattttcct
catttacattttccaatgctatcccaaaagtcctccatatccccccccac
tcccctaccacccactcccccttttttggccctggcgctcccctgtactg
gggcatataagtttgcatgtccaatggggctctctttccagtgatgccga
ctagccatcttttgatacttatgcagctagagacaagagctccagggtac
tggttagttcataatgttgttccaccttataaggtggcaaatcccccagc
tcattggacttttctaagtcctccattgggg
gaattcatctccttctgtgtatttttcaatctttatgttctaattaggca
tcataatttgtaggacagtaatgaagggacactttgaaaaagacatgggg
catatgaatagaatttgtaaaaccagtaaggtttctttcaatactctagg
ttaaaaaatgattgctaaataatctggaccaaggcagtgagtgaaaattg
aagttatgagtcacaagatctgtagagaattaataaagaaagtagacatt
tcctcctgagtctaataagaaagtccccagtagataagtagttatctcag
gaatgctgaacattcactctgcttttagataattatgtcactagatgatt
aatgggaataatgtcaatttcattcaaggagaattccatcttaaacccca
aattgtatactcctgctttccacctcccccaaatgaaaaatgcatgtaag
cctacaattagaaaaattgaccaagtctgggtcacttttccagatttgaa
atacttcattaattgattatgtgtataaggtagagccctatatatctggt
caattttgttcgcttcctatatggtaacaaaacaaataaatattgaaatt
tcttctgtgatcttctggatcacactagacctactaactttgtgactaga
acagtaatgaaaatggtagtatgtatatggtagtaatgtagttgggtttt
tggtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_112076410_112077497
seq2: B6Ng01-030B17.b_41_1121

seq1  GGAATTCTTAGACTTAAACTTCTTTTCTCATCTTCTGAAAATAAGGGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCTTAGACTTAAACTTCTTTTCTCATCTTCTGAAAATAAGGGTCA  50

seq1  TTAGAAGCCACCCAAACTTACCTCAATGCTAGGAGAGACCAGAGCAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGCCACCCAAACTTACCTCAATGCTAGGAGAGACCAGAGCAGTGT  100

seq1  CCATGCCCAAGAGCCTGAGCATAAGGGGTTGTACACTCACACAGCATTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCCAAGAGCCTGAGCATAAGGGGTTGTACACTCACACAGCATTGC  150

seq1  TGTATCATTTTGAGTGTTCTCCAGCCTGGGGAGTATGCACTTCAATGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCATTTTGAGTGTTCTCCAGCCTGGGGAGTATGCACTTCAATGTGT  200

seq1  TTTTGTAGCTCATTGTCTCAGAAGACTGTAATTGGAGAGATAACATCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAGCTCATTGTCTCAGAAGACTGTAATTGGAGAGATAACATCCTT  250

seq1  TGGGACTTTTGAGATAATATGAGAGGACTGGGAAATGAATAGGATTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTTTTGAGATAATATGAGAGGACTGGGAAATGAATAGGATTGGGA  300

seq1  TGTATGATGTGAAATTCACAAAGAATCAAAATTTTTTTTGAAAAAAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGATGTGAAATTCACAAAGAATCAAAATTTTTTTTGAAAAAAAATA  350

seq1  ATGAATAGATATGATTACATCTACACAAACACTCAAAAGTATGTTTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAGATATGATTACATCTACACAAACACTCAAAAGTATGTTTTATT  400

seq1  TGAATTTGTATCCCATACAACTGCATGGTATGCATGTTTAAGCGGTTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTGTATCCCATACAACTGCATGGTATGCATGTTTAAGCGGTTGAC  450

seq1  TTTTTTCTTTTTACTATTTCATTGTAAAAACTGATACTAACAATTTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTTTACTATTTCATTGTAAAAACTGATACTAACAATTTCAAA  500

seq1  ACAAATTAAAATGGAGTGTGTCAAGGTGTGAATGTGTGAAAAATTCTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTAAAATGGAGTGTGTCAAGGTGTGAATGTGTGAAAAATTCTTTT  550

seq1  TTAACTCACTTTTTGTTTGAGAATTTCATGCACGCATATAATGCATTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCACTTTTTGTTTGAGAATTTCATGCACGCATATAATGCATTTTG  600

seq1  ATCAAGTCGCTCTTCATTTCCTTTCATAGAGTTCTTCCCTGTCCCCCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTCGCTCTTCATTTCCTTTCATAGAGTTCTTCCCTGTCCCCCATA  650

seq1  CTAATTTCCTCCAAATTCCGTGGGCTCTCTAAAAAATATTTTGCTCTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTCCTCCAAATTCCGTGGGCTCTCTAAAAAATATTTTGCTCTTTA  700

seq1  GCAGTACCAATATGTATTAGAGCATGCCTAGCCTTTCAGGAGCTGTATTA  750
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCAGTACCAATATGTATTAGAGCATGCCTAGCCTTTCA-GAGCTGTATTA  749

seq1  CTGAAAAAATATCTCCACTTCCTTGTCCTTTTTTTTAATTAGGTATTTTC  800
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTGAAAAAATATCTCCACTTCCTTGTCC-TTTTTTTAATTAGGTATTTTC  798

seq1  CTCATTTACA-TTTCCAATGCTATCCCAAAAGTCCTCCATATCCCCCCCC  849
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTACATTTTCCAATGCTATCCCAAAAGTCCTCCATATCCCCCCCC  848

seq1  ACTCCCCTACCCACCCACTCCCCC-TTTTTGGCCCTGGCGCTCCCCTGTA  898
      ||||||||| |||||||||||||| |||||||||||||||||||||||||
seq2  ACTCCCCTA-CCACCCACTCCCCCTTTTTTGGCCCTGGCGCTCCCCTGTA  897

seq1  CTGGGGCATATAAAGTTTGCATGTCCAATGGGCCTCTCTTTCCAGTGATG  948
      ||||||||||| |||||||||||||||||||| |||||||||||||||| 
seq2  CTGGGGCATAT-AAGTTTGCATGTCCAATGGGGCTCTCTTTCCAGTGAT-  945

seq1  GCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCCA  998
      |||||||| ||||||||||||||| |||||||||||||||||||||||||
seq2  GCCGACTA-GCCATCTTTTGATACTTATGCAGCTAGAGACAAGAGCTCCA  994

seq1  GGGTACTGGTTAGTTCATAATGTTGTTCCACC-TATAGGGTTGCAGATCC  1047
      |||||||||||||||||||||||||||||||| |||| ||| ||| || |
seq2  GGGTACTGGTTAGTTCATAATGTTGTTCCACCTTATAAGGTGGCAAAT-C  1043

seq1  CCCCAGCTCATTGGGTACTTTCTCTAGTTCCTCCATTGGGG  1088
      ||||||||||||||  ||||| ||||  |||||||||||||
seq2  CCCCAGCTCATTGG--ACTTT-TCTAAGTCCTCCATTGGGG  1081

seq1: chr7_112238242_112238945
seq2: B6Ng01-030B17.g_70_775 (reverse)

seq1  TAACCAATAA-CCTACTACATTACTACCATATACATACTACCATTTTCAT  49
      ||||||| || || ||||||||||||||||||||||||||||||||||||
seq2  TAACCAAAAACCCAACTACATTACTACCATATACATACTACCATTTTCAT  50

seq1  TACTGTTCTAGTCAC-AAGTTAGTAGGTCTAGTGTGATCCAGAAGATCAC  98
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TACTGTTCTAGTCACAAAGTTAGTAGGTCTAGTGTGATCCAGAAGATCAC  100

seq1  AGAAGAAATTTCAATATTTATTTGTTTTGTTACCATATAGGAAGCGAACA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAATTTCAATATTTATTTGTTTTGTTACCATATAGGAAGCGAACA  150

seq1  AAATTGACCAGATATATAGGGCTCTACCTTATACACATAATCAATTAATG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGACCAGATATATAGGGCTCTACCTTATACACATAATCAATTAATG  200

seq1  AAGTATTTCAAATCTGGAAAAGTGACCCAGACTTGGTCAATTTTTCTAAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTCAAATCTGGAAAAGTGACCCAGACTTGGTCAATTTTTCTAAT  250

seq1  TGTAGGCTTACATGCATTTTTCATTTGGGGGAGGTGGAAAGCAGGAGTAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGCTTACATGCATTTTTCATTTGGGGGAGGTGGAAAGCAGGAGTAT  300

seq1  ACAATTTGGGGTTTAAGATGGAATTCTCCTTGAATGAAATTGACATTATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTGGGGTTTAAGATGGAATTCTCCTTGAATGAAATTGACATTATT  350

seq1  CCCATTAATCATCTAGTGACATAATTATCTAAAAGCAGAGTGAATGTTCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTAATCATCTAGTGACATAATTATCTAAAAGCAGAGTGAATGTTCA  400

seq1  GCATTCCTGAGATAACTACTTATCTACTGGGGACTTTCTTATTAGACTCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCCTGAGATAACTACTTATCTACTGGGGACTTTCTTATTAGACTCA  450

seq1  GGAGGAAATGTCTACTTTCTTTATTAATTCTCTACAGATCTTGTGACTCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAATGTCTACTTTCTTTATTAATTCTCTACAGATCTTGTGACTCA  500

seq1  TAACTTCAATTTTCACTCACTGCCTTGGTCCAGATTATTTAGCAATCATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCAATTTTCACTCACTGCCTTGGTCCAGATTATTTAGCAATCATT  550

seq1  TTTTAACCTAGAGTATTGAAAGAAACCTTACTGGTTTTACAAATTCTATT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACCTAGAGTATTGAAAGAAACCTTACTGGTTTTACAAATTCTATT  600

seq1  CATATGCCCCATGTCTTTTTCAAAGTGTCCCTTCATTACTGTCCTACAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCCCCATGTCTTTTTCAAAGTGTCCCTTCATTACTGTCCTACAAA  650

seq1  TTATGATGCCTAATTAGAACATAAAGATTGAAAAATACACAGAAGGAGAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATGCCTAATTAGAACATAAAGATTGAAAAATACACAGAAGGAGAT  700

seq1  GAATTC  704
      ||||||
seq2  GAATTC  706