BAC Information

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BAC

Clone NameB6Ng01-031A08
Chromosome7 (Build37)
Map Location 36,872,511 - 36,898,661
singlet/doubletdoublet
Overlap genenone
Upstream geneCebpa, Slc7a10, Wdr88, Gpatch1, Rhpn2, C230052I12Rik, Ccdc123, Slc7a9, 2410004F06Rik, Nudt19, Rgs9bp, Ankrd27, Pdcd5, Dpy19l3, zfp507
Downstream geneLOC100043872, EG668988, LOC668507, Tshz3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031A08.bB6Ng01-031A08.g
ACCDH860753DH860754
length973652
definitionDH860753|Mus musculus domesticus DNA, BAC clone: B6Ng01-031A08, 5' end.DH860754|Mus musculus domesticus DNA, BAC clone: B6Ng01-031A08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,897,689 - 36,898,661)(36,872,511 - 36,873,162)
sequence
gaattcatggaaaaccagaagaagccaagtaaaatctggatttaatgaca
ctggcataattagtcttgacaaatgttatgaaagtggggagccggtggca
tcataaggtattatcattctactatcttgatgacgaactgttgccttatg
gaactgtgaatgaaataaatcctttcctcccttagctgactttagtcatg
gtgtttcatcacagcaatagcacccttaactaagagttagttagttagtt
agttagttagttagttagttagtaacccaactaaggtggttagggattct
tgaagtttcacctggaaaacttattgaaatttcacctcttctcagaggtt
ctaattttgaaggttttggggtagagcccagatattggcatttgtcatag
gttctaagtgatgctgagttgcagcactcggatcccacatccagaccact
gttgtaggcagtggaagctgtccttgggcttctctgagagcagatccagt
aggataatgataggtaaagaggtaagcaggtagatgattgatgggtggta
gacatctagacggtgtgtaacctacttctctcgtcaccgtgacagatcat
ctgatataatttaaggaaggaaaggtttacttgggcttcaaaagttttaa
tccatcatagctagaagggcagagtagggcagggcagctcacatcatagt
ggtggagaaacagagatggatgaagcctggtcctcagctgggatttcatt
ttccctctttttattttgtctgagccccatagaccaggggatggtgtttc
tcactcagggtaggtctcctcacactcagtcccttctagaagtgtcatag
atatacttgaggaatatcgatcgccctagtctcctacactttctaaacca
atggagttgacaataaagactaatcacatatatgggtagagagaaagaaa
tacagagaggagacgcaggagga
gaattctttgtctcctgccttactcattgtagccttgaggggtaactttg
aatcagcttgcaggacatgggatgagattttgataaaagttgtacagaca
gcctctgagatcttggtcactttggggaggggtcatctgaatgcaggctt
tctggttagccttctcactctgctctctgcaactggagagcagtggccat
gtaccatctccacgtgtgtgctgtaaacgtggggcagcaattctgagtaa
cctcacagttcagggagatattctttcccagtgcttgctgagcctcctta
ctcttgcaggctgtgacatcatgaagctgcaaagcactccccccgccccc
attccatacagactacatgcgaacaggagcctggcagcaaagatcacagc
atctgtgacaacatggatgcttaggagtagaccggcaagatggggaccca
aggagctggaggtcgttcccattcagccatactggctcctccttaaatca
aggttcaggttgagagccgatgccgggaaatcagcttagcacacaagcca
aggctatgtgagaaacagtcctgagttggctaagaacccctgcagagcct
ggccacctgagtagaggtgaactcttatcagctagagctattgggggggg
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_36897689_36898661
seq2: B6Ng01-031A08.b_43_1014 (reverse)

seq1  CCTCCT---TCTCCTCTCTCTATTTCTTTCTCTCTTACCCATATATGGTG  47
      ||||||   |||||||||| |||||||||||||| ||||||||||| |||
seq2  CCTCCTGCGTCTCCTCTCTGTATTTCTTTCTCTC-TACCCATATAT-GTG  48

seq1  ATTAGTCTTTATTGTCAACTCCATTGGTTTTAGAAAAGTGTAGGAGACTA  97
      ||||||||||||||||||||||||||| ||||| ||||||||||||||||
seq2  ATTAGTCTTTATTGTCAACTCCATTGG-TTTAG-AAAGTGTAGGAGACTA  96

seq1  GGGCGATCGATATTCCTCAAGTATATCTATGACACTTCTAGAAAGGACTG  147
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGGCGATCGATATTCCTCAAGTATATCTATGACACTTCTAGAAGGGACTG  146

seq1  AGTGTGAGGAGACCTACCCTGAGTGAGAAACACCATCCCCTGGTCTATGG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGAGGAGACCTACCCTGAGTGAGAAACACCATCCCCTGGTCTATGG  196

seq1  GGCTCAGACAAAATAAAAAGAGGGAAAATGAAATTCCAGCTGAGGACCAG  247
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GGCTCAGACAAAATAAAAAGAGGGAAAATGAAATCCCAGCTGAGGACCAG  246

seq1  GCTTCATCCATCTCTGTTTCTCCACCACTATGATGTGAGCTGCCCTGCCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATCCATCTCTGTTTCTCCACCACTATGATGTGAGCTGCCCTGCCC  296

seq1  TACTCTGCCCTTCTAGCTATGATGGATTAAAACTTTTGAAGCCCAAGTAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGCCCTTCTAGCTATGATGGATTAAAACTTTTGAAGCCCAAGTAA  346

seq1  ACCTTTCCTTCCTTAAATTATATCAGATGATCTGTCACGGTGACGAGAGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCCTTCCTTAAATTATATCAGATGATCTGTCACGGTGACGAGAGA  396

seq1  AGTAGGTTACACACCGTCTAGATGTCTACCACCCATCAATCATCTACCTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGTTACACACCGTCTAGATGTCTACCACCCATCAATCATCTACCTG  446

seq1  CTTACCTCTTTACCTATCATTATCCTACTGGATCTGCTCTCAGAGAAGCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTCTTTACCTATCATTATCCTACTGGATCTGCTCTCAGAGAAGCC  496

seq1  CAAGGACAGCTTCCACTGCCTACAACAGTGGTCTGGATGTGGGATCCGAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGACAGCTTCCACTGCCTACAACAGTGGTCTGGATGTGGGATCCGAG  546

seq1  TGCTGCAACTCAGCATCACTTAGAACCTATGACAAATGCCAATATCTGGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCAACTCAGCATCACTTAGAACCTATGACAAATGCCAATATCTGGG  596

seq1  CTCTACCCCAAAACCTTCAAAATTAGAACCTCTGAGAAGAGGTGAAATTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACCCCAAAACCTTCAAAATTAGAACCTCTGAGAAGAGGTGAAATTT  646

seq1  CAATAAGTTTTCCAGGTGAAACTTCAAGAATCCCTAACCACCTTAGTTGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGTTTTCCAGGTGAAACTTCAAGAATCCCTAACCACCTTAGTTGG  696

seq1  GTTACTAACTAACTAACTAACTAACTAACTAACTAACTAACTCTTAGTTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTAACTAACTAACTAACTAACTAACTAACTAACTAACTCTTAGTTA  746

seq1  AGGGTGCTATTGCTGTGATGAAACACCATGACTAAAGTCAGCTAAGGGAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGCTATTGCTGTGATGAAACACCATGACTAAAGTCAGCTAAGGGAG  796

seq1  GAAAGGATTTATTTCATTCACAGTTCCATAAGGCAACAGTTCGTCATCAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGATTTATTTCATTCACAGTTCCATAAGGCAACAGTTCGTCATCAA  846

seq1  GATAGTAGAATGATAATACCTTATGATGCCACCGGCTCCCCACTTTCATA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTAGAATGATAATACCTTATGATGCCACCGGCTCCCCACTTTCATA  896

seq1  ACATTTGTCAAGACTAATTATGCCAGTGTCATTAAATCCAGATTTTACTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGTCAAGACTAATTATGCCAGTGTCATTAAATCCAGATTTTACTT  946

seq1  GGCTTCTTCTGGTTTTCCATGAATTC  973
      ||||||||||||||||||||||||||
seq2  GGCTTCTTCTGGTTTTCCATGAATTC  972

seq1: chr7_36872511_36873162
seq2: B6Ng01-031A08.g_66_717

seq1  GAATTCTTTGTCTCCTGCCTTACTCATTGTAGCCTTGAGGGGTAACTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTCTCCTGCCTTACTCATTGTAGCCTTGAGGGGTAACTTTG  50

seq1  AATCAGCTTGCAGGACATGGGATGAGATTTTGATAAAAGTTGTACAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGCTTGCAGGACATGGGATGAGATTTTGATAAAAGTTGTACAGACA  100

seq1  GCCTCTGAGATCTTGGTCACTTTGGGGAGGGGTCATCTGAATGCAGGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGAGATCTTGGTCACTTTGGGGAGGGGTCATCTGAATGCAGGCTT  150

seq1  TCTGGTTAGCCTTCTCACTCTGCTCTCTGCAACTGGAGAGCAGTGGCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTAGCCTTCTCACTCTGCTCTCTGCAACTGGAGAGCAGTGGCCAT  200

seq1  GTACCATCTCCACGTGTGTGCTGTAAACGTGGGGCAGCAATTCTGAGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATCTCCACGTGTGTGCTGTAAACGTGGGGCAGCAATTCTGAGTAA  250

seq1  CCTCACAGTTCAGGGAGATATTCTTTCCCAGTGCTTGCTGAGCCTCCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAGTTCAGGGAGATATTCTTTCCCAGTGCTTGCTGAGCCTCCTTA  300

seq1  CTCTTGCAGGCTGTGACATCATGAAGCTGCAAAGCACTCCCCCCGCCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCAGGCTGTGACATCATGAAGCTGCAAAGCACTCCCCCCGCCCCC  350

seq1  ATTCCATACAGACTACATGCGAACAGGAGCCTGGCAGCAAAGATCACAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATACAGACTACATGCGAACAGGAGCCTGGCAGCAAAGATCACAGC  400

seq1  ATCTGTGACAACATGGATGCTTAGGAGTAGACCGGCAAGATGGGGACCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGACAACATGGATGCTTAGGAGTAGACCGGCAAGATGGGGACCCA  450

seq1  AGGAGCTGGAGGTCGTTCCCATTCAGCCATACTGGCTCCTCCTTAAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTGGAGGTCGTTCCCATTCAGCCATACTGGCTCCTCCTTAAATCA  500

seq1  AGGTTCAGGTTGAGAGCCGATGCCGGGAAATCAGCTTAGCACACAAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAGGTTGAGAGCCGATGCCGGGAAATCAGCTTAGCACACAAGCCA  550

seq1  AGGCTATGTGAGAAACAGTCCTGAGTTGGCTAAGAACCCCTGCAGAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATGTGAGAAACAGTCCTGAGTTGGCTAAGAACCCCTGCAGAGCCT  600

seq1  GGCCACCTGAGTAGAGGTGAACTCTTATCAGCTAGAGCTATTGGGGGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACCTGAGTAGAGGTGAACTCTTATCAGCTAGAGCTATTGGGGGGGG  650

seq1  GG  652
      ||
seq2  GG  652