BAC Information

Click to search

BAC

Clone NameB6Ng01-031A14
Chromosome7 (Build37)16 (Build37)
Map Location 14,231,741 - 14,232,2827,812,768 - 7,813,381
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneVmn2r55, LOC629079, LOC629081, EG232875, LOC100043128, LOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256
Downstream geneLOC666267, LOC100042624, LOC100043194, Sult2a1, EG620627, EG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031A14.bB6Ng01-031A14.g
ACCDH860765DH860766
length848935
definitionDH860765|Mus musculus domesticus DNA, BAC clone: B6Ng01-031A14, 5' end.DH860766|Mus musculus domesticus DNA, BAC clone: B6Ng01-031A14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(14,231,741 - 14,232,282)(7,812,768 - 7,813,381)
sequence
gaattctttgtttagctctgtaccccatttttaatagggttggttaattt
cctggaatccaacttcttgtattctttatatttattggatattagccccc
tttccactttaggattggtaaagatcttttcctgctctgttggttgcttt
tggtcttattttcagtgtcctttgcattttatgaggtcccatttctctat
tcttgacaagccattggtattctgttcaggaatatttcccctgtgcccat
atcttcgaggctcttcaccacttcctcctctgtaagtttcagtgtctctg
gttttatgtggagttgtttgatccacttagacttgagcctgatataactg
tctcctgagaggctctgccaatgtctgagaaatacagaggcagatgcttg
cagccaaccattggaaggaacactcggttcccaatggaggagttagatca
aagactgaagtagctaaaggggtttaaaattccacaggaagaacaacatc
taccaaccagatgcccagagctcccagggcctaaaccattaaagtataca
catggagggactcatagctccagccacatatgtagcagaggatgtccttg
ttgggcattaatggggggagaggcactttgtcctgtgaaggctcaatgcc
actgtggggaggcagggtgggtgtgtgggagaacaccttttatagaagca
gggtgagagtggatggtataaggggatttccagggagggggaggctacca
ggaaaggagatgacttttgaaatggaggttatgaaaatatctataaaagg
aagacaaaagaaaatatccagattaaatatattacccttttgcttgtt
gaattcagaactcttcagctgaggaacggtggtactggtaagtctcccaa
attgatccccgggttaaagggggataaaaaggaaaagaaaagggaggaaa
aataaaaggaatcagtgataaagaaaaggaaatagtgaagaaaaggaaag
gggaaagagaaaaaaaaagggaaaggaaaggaaggaaagaaaggattgag
acaataaggttcccggctttgggacaagttaaggttcccggttttgggac
aagttaaggttcatgagttatgcttttttctcctattgaccctttgtggg
taggtctgatagttttggtcttgtttgttctgatatatggactctgttac
tgtttgaaactgtgtgtagaggcagtcaagacaggtcagaaaatccttac
agagcaacaagaaagtatgtcggaagaggagaagggcttaaaaagaaaaa
ggaaaaagaaaggagacacagtgttatcaggtggacagaaaggacaaaat
aaaagagccgaggcagaggaggaggaaggcatgcctttcacctgggcagt
atttagattggaaagccttccttattgaatttgcaaatgaacaggcagtg
gctaactctgctgcaggaaatccagcatgggatagggatatgctgcttgg
tcaaggtcgctttgcacagcaacagacaagatatccagtgcaggtgtttg
agcaggtgaatcagattgccataagggcgtggaaatcattgcccacaggt
gttgacggtgttgacgtgggcgagagggtctgtttgtttccccaggatca
ttgacaacagctgtgggtcccagaacgactgacaaggactgtgaaagatc
aagatgatcccagatgatcctgctcctgatgatgagactgggatagtata
cctttgtgggccatagtagatcatggccagtacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_14231741_14232282
seq2: B6Ng01-031A14.b_348_889

seq1  TGTGGAGTTGTTTGATCCACTTAGACTTGAGCCTGATATAACTGTCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGTTGTTTGATCCACTTAGACTTGAGCCTGATATAACTGTCTCCT  50

seq1  GAGAGGCTCTGCCAATGTCTGAGAAATACAGAGGCAGATGCTTGCAGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCTCTGCCAATGTCTGAGAAATACAGAGGCAGATGCTTGCAGCCA  100

seq1  ACCATTGGAAGGAACACTCGGTTCCCAATGGAGGAGTTAGATCAAAGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGGAAGGAACACTCGGTTCCCAATGGAGGAGTTAGATCAAAGACT  150

seq1  GAAGTAGCTAAAGGGGTTTAAAATTCCACAGGAAGAACAACATCTACCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGCTAAAGGGGTTTAAAATTCCACAGGAAGAACAACATCTACCAA  200

seq1  CCAGATGCCCAGAGCTCCCAGGGCCTAAACCATTAAAGTATACACATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGCCCAGAGCTCCCAGGGCCTAAACCATTAAAGTATACACATGGA  250

seq1  GGGACTCATAGCTCCAGCCACATATGTAGCAGAGGATGTCCTTGTTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTCATAGCTCCAGCCACATATGTAGCAGAGGATGTCCTTGTTGGGC  300

seq1  ATTAATGGGGGGAGAGGCACTTTGTCCTGTGAAGGCTCAATGCCACTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGGGGGGAGAGGCACTTTGTCCTGTGAAGGCTCAATGCCACTGTG  350

seq1  GGGAGGCAGGGTGGGTGTGTGGGAGAACACC-TTTATAGAAGCAGGGTGA  399
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GGGAGGCAGGGTGGGTGTGTGGGAGAACACCTTTTATAGAAGCAGGGTGA  400

seq1  GAGTGGATGGTATAAGGGGATTTCCAGGGAGGGGGAGGCTACCAGGAAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGATGGTATAAGGGGATTTCCAGGGAGGGGGAGGCTACCAGGAAAG  450

seq1  GAGATGAC-TTTGAAATGGAAGTAAAGAAAATATCTAATAAAAAGGAAGA  498
      |||||||| ||||||||||| || | |||||||||||   ||||||||||
seq2  GAGATGACTTTTGAAATGGAGGTTATGAAAATATCTA--TAAAAGGAAGA  498

seq1  CAAAAGAAAATATCCCAGAATAAATATATTA-CCGTTTGCTTGTT  542
      ||||||||||||| ||||| ||||||||||| || ||||||||||
seq2  CAAAAGAAAATAT-CCAGATTAAATATATTACCCTTTTGCTTGTT  542

seq1: chr16_7812768_7813381
seq2: B6Ng01-031A14.g_67_680

seq1  ATTCAGAACTCTTCAGCTGAGGAACGGTGGTACCGGTAAGTCTCCCAAAT  50
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATTCAGAACTCTTCAGCTGAGGAACGGTGGTACTGGTAAGTCTCCCAAAT  50

seq1  TGATCCCCGGGTTAAAGGGGGATAAAAAGGAAAAGAAAAGGGAGGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCCGGGTTAAAGGGGGATAAAAAGGAAAAGAAAAGGGAGGAAAAA  100

seq1  TAAAAGGAATCAGTGATAAAGAAAAGGAAATAGTGAAGAAAAGGAAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGAATCAGTGATAAAGAAAAGGAAATAGTGAAGAAAAGGAAAGGG  150

seq1  GAAAGGAAAAAAAGGGGGGAAAGGAAAGGAAGGAAAGAAAGGATTGAGAC  200
      |||||  ||||||   ||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAAAAAAAAAGGGAAAGGAAAGGAAGGAAAGAAAGGATTGAGAC  200

seq1  AATAAGGTTCCTGGCTTTGGGACAAGTTAAGGTTCCCAGTTTTGGGACAA  250
      ||||||||||| ||||||||||||||||||||||||| ||||||||||||
seq2  AATAAGGTTCCCGGCTTTGGGACAAGTTAAGGTTCCCGGTTTTGGGACAA  250

seq1  GTTAAGGTTCATGAGTTATGCTTTTTTCTCCTATTGACCCTTTGTGGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGGTTCATGAGTTATGCTTTTTTCTCCTATTGACCCTTTGTGGGTA  300

seq1  GGTCTGATAGTTTTGGTCTTGTTTGTTCTGATATATGGACTCTGTTACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGATAGTTTTGGTCTTGTTTGTTCTGATATATGGACTCTGTTACTG  350

seq1  TTTGAAACTGTGTGTAGAGGCAGTCAAGACAGGTCAGAAAATCCTTACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAACTGTGTGTAGAGGCAGTCAAGACAGGTCAGAAAATCCTTACAG  400

seq1  AGCAACAAAAAAGTATGTCAGAAGAGGAGAAGGGCTTAAAAAGAAAAAGG  450
      |||||||| |||||||||| ||||||||||||||||||||||||||||||
seq2  AGCAACAAGAAAGTATGTCGGAAGAGGAGAAGGGCTTAAAAAGAAAAAGG  450

seq1  AAAAAGAAAGGAGACACAGTGTTATCAGGTGGACAGAAAGGACAAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAGGAGACACAGTGTTATCAGGTGGACAGAAAGGACAAAATAA  500

seq1  AAGAGCCGAGGCGGAGGAGGAGGAAGGCATGCCTTTCACCTGGGCAGTAT  550
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAGAGCCGAGGCAGAGGAGGAGGAAGGCATGCCTTTCACCTGGGCAGTAT  550

seq1  TTAGATTGGAAAGCCTTCCTTATTGAATTTGCAAATGAACAGGCAGTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTGGAAAGCCTTCCTTATTGAATTTGCAAATGAACAGGCAGTGGC  600

seq1  TAACTTTGCTGCAG  614
      ||||| ||||||||
seq2  TAACTCTGCTGCAG  614