BAC Information

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BAC

Clone NameB6Ng01-031I15
Chromosome7 (Build37)
Map Location 6,107,996 - 6,108,969
singlet/doubletsinglet
Overlap genenone
Upstream geneV1rd3, EG665150, Nlrp2, EG272350, V1rd4, EG665163, V1rd10, EG630071, EG665255, EG636697, EG636705, LOC636731, LOC673215, V1rd2, LOC100041627, LOC100041637, V1rd1, LOC100041647, V1rd11, LOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787
Downstream geneZfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031I15.bB6Ng01-031I15.g
ACCDH861122DH861123
length9561,152
definitionDH861122|Mus musculus domesticus DNA, BAC clone: B6Ng01-031I15, 5' end.DH861123|Mus musculus domesticus DNA, BAC clone: B6Ng01-031I15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctgtgtggcccaggactcgggatggaacagtaactaccgtgg
ctgtgtctgatgctgccagtttgccttttagttttgttagctttgagcca
ggaagggatagttaatttttttttttttttttttttttactgtcctccgt
ttactctttacctttggggccattttaatacccctgctgtgggttcgcct
ttagccttttgatcagttacaagcagcctgtgatctttatcacccgttga
aaggtcctggctggtttatctttaatctaaccacggaagtccagcgcttg
aacatgaattacaggcagtttggacattttccattacagggctcagcata
ggcctcctcttgaattttctaactctctacacatccttaacagtctgctg
agcaaagacttctggagcaccttgctaaggagatggctatgctttccatt
ttcttagcttgtcctcaggtgtcatgtatcgttttgcctgtgggctttgc
ttctttaggctgcccaggattttctctggtgcaggaggagtttgtttaaa
aagtccatcccttacttagtccaagtgtcagcagcacctgacgcctgctt
ttgtaaaggtagttacgtgatgatgataccatttgtctcagagaagctga
cattgactttcaagtttcaaattgtgccttggaagcagatatctgtagag
ggtcctttcattccttttcttcatcatcagcatcctccaaactgtgatgg
acctttcttctaggagagtaataagtcataaacacttaatttggagccct
actctgaaggttcgaggtcattcttgctatgtcacttagtaagtaatgtg
acctctggtttctgcaaacagccgatttcagatgagtcgtccaaaatgca
cccgcaccggaggctcgagcgaacatttggaaaactccgatctcgtgacg
attttt
gaattctgtatcaaacataaaactggaatttcttataaccccatgggaca
aggaatagttgaatgtgctcatcgcaccttaaagacttggctttttaaaa
caaaacaggggcagttatatcccccaaggtcaccaaaggctcatcttgcc
tttactttatttgttctaaattttttgcaaactgatattaaaggtcaatc
tgcagcggatggccactggcatccagttacttctaattcttatgcattag
taaaatggaaggacccgctgactaactaatggaaggatccagatccagtt
ctaatctgaggaaggggctcggtttgtgttttattcatgagatgaagatg
gagcgcagtgactgccagagagattaattcgtcagatgaacacagattct
gaatcttctcgtaagtatcattttgaggactaaaattcctcttttactta
gaattcagctgggaacccaggctcccagaagagctgttttcctgctactc
tctgagccagctcccccacaggaagcagaagactagcttagcttttacaa
tttgcaactgaataaagtacctggacttccccaaaagaagatttgatttg
ctactttctcattgtctagatcttgtttttcaagcaggtcaaccaacatt
cctccagccggaccatcgggcgtgcattcccccgcccccaagagcacaca
ggtgacaactgctatcttcattccagggacattccagcacatgactttca
ctctgagttgaaatttaggtttaccaagagggctagaaaagccaatattt
caatattaaaagaaatgggtttttattttgatagacgggcttagtccctt
agctggcctctggctttccatccttgctgatactgcaaggtcccttaagt
ctcagggttgtgggataacagagttgagaggatgactcccagctcctatt
tcagccacatcatgggtgtatatggacctaatcttgtgctaagccctgct
aaatctagaggtgacaatctcccttaggacgtgccaatactcagattagt
gcttacgttcgactatgaatacgaatgggttgctgaggtcagaatatccg
cgagagggcccttgacattactgatgcccgggtgatacccagttggagtt
gt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_6107996_6108969
seq2: B6Ng01-031I15.b_38_993 (reverse)

seq1  AAAAATTCGGTTCACGAGATCTGGAGTTTTTCCCCAAAATGTTTCCGCTC  50
       |||| |||  |||||||||| ||||||||    | |||||||  |||||
seq2  -AAAAATCG--TCACGAGATC-GGAGTTTT----CCAAATGTT--CGCTC  40

seq1  GAGCCTCCGGTGCGGGTTGCATTTTGGGACGACCTCATCTTGAAATCGGC  100
      |||||||||||||||| |||||||| |||||| |||||| ||||||||| 
seq2  GAGCCTCCGGTGCGGG-TGCATTTT-GGACGA-CTCATC-TGAAATCGG-  85

seq1  CTGTTTTGCAGAGAACCAGAGGTCACATTACCTTACTAAGTGACATAGCA  150
      ||| |||||||| ||||||||||||||||| |||||||||||||||||||
seq2  CTG-TTTGCAGA-AACCAGAGGTCACATTA-CTTACTAAGTGACATAGCA  132

seq1  AGAATGACCTCGAACCTTCAGAGTAGGGCTCCAAATTAAGTGTTTATGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGACCTCGAACCTTCAGAGTAGGGCTCCAAATTAAGTGTTTATGAC  182

seq1  TTATTACTCTCCTAGAAGAAAGGTCCATCACAGTTTGGAGGATGCTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACTCTCCTAGAAGAAAGGTCCATCACAGTTTGGAGGATGCTGATG  232

seq1  ATGAAGAAAAGGAATGAAAGGACCCTCTACAGATATCTGCTTCCAAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAAAAGGAATGAAAGGACCCTCTACAGATATCTGCTTCCAAGGCA  282

seq1  CAATTTGAAACTTGAAAGTCAATGTCAGCTTCTCTGAGACAAATGGTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGAAACTTGAAAGTCAATGTCAGCTTCTCTGAGACAAATGGTATC  332

seq1  ATCATCACGTAACTACCTTTACAAAAGCAGGCGTCAGGTGCTGCTGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCACGTAACTACCTTTACAAAAGCAGGCGTCAGGTGCTGCTGACAC  382

seq1  TTGGACTAAGTAAGGGATGGACTTTTTAAACAAACTCCTCCTGCACCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACTAAGTAAGGGATGGACTTTTTAAACAAACTCCTCCTGCACCAGA  432

seq1  GAAAATCCTGGGCAGCCTAAAGAAGCAAAGCCCACAGGCAAAACGATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCCTGGGCAGCCTAAAGAAGCAAAGCCCACAGGCAAAACGATACA  482

seq1  TGACACCTGAGGACAAGCTAAGAAAATGGAAAGCATAGCCATCTCCTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACCTGAGGACAAGCTAAGAAAATGGAAAGCATAGCCATCTCCTTAG  532

seq1  CAAGGTGCTCCAGAAGTCTTTGCTCAGCAGACTGTTAAGGATGTGTAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTGCTCCAGAAGTCTTTGCTCAGCAGACTGTTAAGGATGTGTAGAG  582

seq1  AGTTAGAAAATTCAAGAGGAGGCCTATGCTGAGCCCTGTAATGGAAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGAAAATTCAAGAGGAGGCCTATGCTGAGCCCTGTAATGGAAAATG  632

seq1  TCCAAACTGCCTGTAATTCATGTTCAAGCGCTGGACTTCCGTGGTTAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACTGCCTGTAATTCATGTTCAAGCGCTGGACTTCCGTGGTTAGAT  682

seq1  TAAAGATAAACCAGCCAGGACCTTTCAACGGGTGATAAAGATCACAGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATAAACCAGCCAGGACCTTTCAACGGGTGATAAAGATCACAGGCT  732

seq1  GCTTGTAACTGATCAAAAGGCTAAAGGCGAACCCACAGCAGGGGTATTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTAACTGATCAAAAGGCTAAAGGCGAACCCACAGCAGGGGTATTAA  782

seq1  AATGGCCCCAAAGGTAAAGAGTAAACGGAGGACAGTAAAAAAAAAAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCCCAAAGGTAAAGAGTAAACGGAGGACAGTAAAAAAAAAAAAAA  832

seq1  AAAAAAAAATTAACTATCCCTTCCTGGCTCAAAGCTAACAAAACTAAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATTAACTATCCCTTCCTGGCTCAAAGCTAACAAAACTAAAAG  882

seq1  GCAAACTGGCAGCATCAGACACAGCCACGGTAGTTACTGTTCCATCCCGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTGGCAGCATCAGACACAGCCACGGTAGTTACTGTTCCATCCCGA  932

seq1  GTCCTGGGCCACACAGAGGAATTC  974
      ||||||||||||||||||||||||
seq2  GTCCTGGGCCACACAGAGGAATTC  956