BAC Information

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BAC

Clone NameB6Ng01-033A08
Chromosome7 (Build37)10 (Build37)
Map Location 32,572,109 - 32,572,41063,249,619 - 63,250,585
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneKrtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340
Downstream geneLOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033A08.bB6Ng01-033A08.g
ACCDH862189DH862190
length351962
definitionDH862189|Mus musculus domesticus DNA, BAC clone: B6Ng01-033A08, 5' end.DH862190|Mus musculus domesticus DNA, BAC clone: B6Ng01-033A08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(32,572,109 - 32,572,410)(63,249,619 - 63,250,585)
sequence
agtgatggaaaggaccaggggctgtggggacagcagagccacagacacac
aaaggatagacagatccacacttcattagtctccgagtcttgccctgggt
acttgtctgtcttttgttgttttggtttggtttttttttttttttgtttg
ttttgttttgttttgttctgttttgttttgtttttaattaggtattttcc
tcatttacatttccaatgctatcccaaaagtcccccataccctcctcccc
acccccctacccacccactcccactttttggccctggtgttcccctgtac
tgggtcatataaagtttgcaagtccaatgggcctctctttccactgatgg
c
gaattcctgttgggctcagtttgatcatgctgatttgctgaattgaaact
cccaactccggtccttgtctgtggtgatgtctaccaattgaaaatattct
cctttaggaaacttaatttttcttgggggggggcggtaagctcacatttg
gaaaggaggggctttcatgtttactgagttctttttctgtttttacttga
agagccacataaataaatagaaaccattttgatcaataatttaaaatact
gagcctagggagaccagtgtgagtctggctggcttttgagttttctgaag
ccccttgatggtattcataaaacactaatgctaacttgaaaatgtacaca
ttgcttgaaaatgcaggcattgttttctaatattcttgtctggaattttt
aattgggaatattttttttcatacaatatattctaagtgtggtttcccct
ccccagtctcctcccagatcctctctgcctcccacccaaacaaatccaca
cctttctgtctctcattagaaaacaagcagtcatgtaaaaaataataaaa
cgagctaaagaaaagcaaacggtattttctcttttttatactttaagtga
agcatggcgcgtacacctacctgttaattctttccatatctaatttggat
tatttctcttgatagcaaatcttgatgtcacttgttggagtccctctgca
agaacaagtgctcttaacttctgagctgcccctctagcccagtatactgc
ttttaatttctttgttattatattttctttgttattcatgggacttattt
tagagatgccaaggaatatatcaatatgaaatatggagccataaaattca
caaactcttaaaatagtgacctttaagccattgagaagcaggaagaaagg
actactaagagaaccacttaaagaacgagacaaagtgtggacactttgtc
cttcttaaattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_32572109_32572410
seq2: B6Ng01-033A08.b_166_404 (reverse)

seq1  GCCATCACTGGAAAGAGAGGCCCATTGGACATGCAAACTTTGTATGCCCC  50
      ||||||| |||||||||||||||||||||| |||||||||| |||| |||
seq2  GCCATCAGTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGACCC  50

seq1  AGTACAGGGGAACGCCAGGGCCAAAAAGGGGGAGTGGGTGGGTAGGGGAG  100
      ||||||||||||| |||||||||||||| ||||||||||||||||||| |
seq2  AGTACAGGGGAACACCAGGGCCAAAAAGTGGGAGTGGGTGGGTAGGGGGG  100

seq1  TGGGGGTGGGTGGGTATGGGGGACTTTTGGTATAGCATTGGAAATGTAAA  150
      |||||   || ||||||||||||||||||| |||||||||||||||||||
seq2  TGGGG--AGGAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAAA  148

seq1  TGAGCTAAATACCTAATAAAAAATGGAAAAAAAGAAAATGTAAACGAGGA  200
      ||||  ||||||||||| |||     || |||| ||||            
seq2  TGAGGAAAATACCTAATTAAA-----AACAAAACAAAA------------  181

seq1  AAATACCTAATTAAAAAAAAAAGGGATGGATGCCCTTGATAAGAAAAACA  250
                   | || ||||                      ||||||
seq2  ------------CAGAACAAAA---------------------CAAAACA  198

seq1  AAA-AAACAAAAACAAAAAAAAAAAACCAAAAAAAAGTTACAAAACAAAC  299
      ||| |||||||   |||||||||||||||||         |||||| |||
seq2  AAACAAACAAA---AAAAAAAAAAAACCAAA--------CCAAAAC-AAC  236

seq1  AAA  302
      |||
seq2  AAA  239

seq1: chr10_63249619_63250585
seq2: B6Ng01-033A08.g_63_1024

seq1  GAATTCCTGTTGGGCTCAGTTTGATCATGCTGATTTGCTGAATTGAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTGGGCTCAGTTTGATCATGCTGATTTGCTGAATTGAAACT  50

seq1  CCCAACTCCGGTCCTTGTCTGTGGTGATGTCTACCAATTGAAAATATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTCCGGTCCTTGTCTGTGGTGATGTCTACCAATTGAAAATATTCT  100

seq1  CCTTTAGGAAACTTAATTTTTCTTGGGGGGGGGCGGTAAGCTCACATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGGAAACTTAATTTTTCTTGGGGGGGGGCGGTAAGCTCACATTTG  150

seq1  GAAAGGAGGGGCTTTCATGTTTACTGAGTTCTTTTTCTGTTTTTACTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAGGGGCTTTCATGTTTACTGAGTTCTTTTTCTGTTTTTACTTGA  200

seq1  AGAGCCACATAAATAAATAGAAACCATTTTGATCAATAATTTAAAATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCACATAAATAAATAGAAACCATTTTGATCAATAATTTAAAATACT  250

seq1  GAGCCTAGGGAGACCAGTGTGAGTCTGGCTGGCTTTTGAGTTTTCTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTAGGGAGACCAGTGTGAGTCTGGCTGGCTTTTGAGTTTTCTGAAG  300

seq1  CCCCTTGATGGTATTCATAAAACACTAATGCTAACTTGAAAATGTACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTGATGGTATTCATAAAACACTAATGCTAACTTGAAAATGTACACA  350

seq1  TTGCTTGAAAATGCAGGCATTGTTTTCTAATATTCTTGTCTGGAATTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGAAAATGCAGGCATTGTTTTCTAATATTCTTGTCTGGAATTTTT  400

seq1  AATTGGGAATATTTTTTTTCATACAATATATTCTAAGTGTGGTTTCCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGGAATATTTTTTTTCATACAATATATTCTAAGTGTGGTTTCCCCT  450

seq1  CCCCAGTCTCCTCCCAGATCCTCTCTGCCTCCCACCCAAACAAATCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTCTCCTCCCAGATCCTCTCTGCCTCCCACCCAAACAAATCCACA  500

seq1  CCTTTCTGTCTCTCATTAGAAAACAAGCAGTCATGTAAAAAATAATAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTGTCTCTCATTAGAAAACAAGCAGTCATGTAAAAAATAATAAAA  550

seq1  CGAGCTAAAGAAAAGCAAACGGTATTTTCTCTTTTTTATACTTTAAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCTAAAGAAAAGCAAACGGTATTTTCTCTTTTTTATACTTTAAGTGA  600

seq1  AGCATGGCGCGTACACCTACCTGTTAATTCTTTCCATATCTAATTTGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGCGCGTACACCTACCTGTTAATTCTTTCCATATCTAATTTGGAT  650

seq1  TATTTCTCTTGATAGCAAATCTTGATGTCACTTGTTGGAGTCCCTCTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTCTTGATAGCAAATCTTGATGTCACTTGTTGGAGTCCCTCTGCA  700

seq1  AGAACAAGTGCTCTTAACTTCTGAGCTGCCCCTCTAGCCCAGTATACTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAGTGCTCTTAACTTCTGAGCTGCCCCTCTAGCCCAGTATACTGC  750

seq1  TTTAAATTTCTTTGTTATTATA-TTTCTTTGTTATTCAT-GGACTTATTT  798
      ||| |||||||||||||||||| |||||||||||||||| ||||||||||
seq2  TTTTAATTTCTTTGTTATTATATTTTCTTTGTTATTCATGGGACTTATTT  800

seq1  TAGAGATTGCCAAGGAATATATCAATATGAAATATGGAGCCATAAAAATC  848
      |||||| |||||||||||||||||||||||||||||||||||||||| ||
seq2  TAGAGA-TGCCAAGGAATATATCAATATGAAATATGGAGCCATAAAATTC  849

seq1  ACAAACTCTTAAAATAGTGACCTTTAAGCCATTGAGAAGCAGGAAGAAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTCTTAAAATAGTGACCTTTAAGCCATTGAGAAGCAGGAAGAAAG  899

seq1  GACAACTAAGAGAAACCACTTAAAAGAACGAAGACCAAAGTGTGGACACT  948
      ||| |||||||| |||||||| |||||||| ||| |||||||||||||||
seq2  GACTACTAAGAG-AACCACTT-AAAGAACG-AGA-CAAAGTGTGGACACT  945

seq1  TTGCTCCTTCTTAGAATTG  967
      ||| ||||||||| |||||
seq2  TTG-TCCTTCTTA-AATTG  962