BAC Information

Click to search

BAC

Clone NameB6Ng01-033C21
Chromosome7 (Build37)
Map Location 33,220,338 - 33,220,876
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373
Downstream geneEG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033C21.bB6Ng01-033C21.g
ACCDH862308DH862309
length7601,170
definitionDH862308|Mus musculus domesticus DNA, BAC clone: B6Ng01-033C21, 5' end.DH862309|Mus musculus domesticus DNA, BAC clone: B6Ng01-033C21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcaaatgctttttccgcatctaacgaggtgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgagaccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcaagaattttattgaggatttttgc
atcgatattcataagggaaaatggtctgaagttctctatctttgttggat
ctttttgtggtttaggtatcagagtaattgtgccttcatagaatgagttg
gatagagttccctctacttctattttgtggaatagtttgtgcagaactgg
aattagatcttctttgaaggtggtagaactctgcactaaacccatctggt
cctgggcttttttttggttgggagactattaatgactgcttctatttcct
taggggatatgggactttttagaacgttaacttgatcctgatttaacttt
ggtacctggtatctgtctagaaatttgtccatttcatccaggttttccag
ttttgttaagtatagccttttgtagaaggatctgatggtgttttggattt
cttcaagatctgttgttatgtctccctttttcatttctgattttgttaat
taggatgttgtccctgtgccttctagtgagtctagctaagggtttatcca
tctgttgatt
gaattcaagaatattgacttttgttaaaggagtgactaaaggagttcagt
gagtcaacagagtctctagggacagaatgagaattgaaaagaaaaagaca
attagatagcattataaaaagaatagcatgatcgagctatatacagcatg
ctggaagcttaacaaagatggaaatactgaccttaagccatgaataattt
tatcagcctactccacaggatcaaaactcagcagagcagccttccttaaa
ttcaaaatctgaagatacaaacttaaaatgtccagagaggtgttagaatt
gtgccaaataccttataagtgtctttgaattttctcccaattattgtgac
tctcattgtaaagttgagaagtgacagaaatccattggaatttaccatga
cacatgagatggtttcttactcttaaactctgatcctcctttccaacagt
ttgaataggatcataaggagcatcaatccgttgttccaaaggtctatcta
aatctttttgaatactcagagcattagtaacatggtttgctaaatcattt
aaaaatttagctgccttcacttcttgtgtcaaagagattgcagaagtaat
gatgctagctatcaatataatcaaaactgttatactggcaacaatcaaac
ccactaaactcttgcttctgcttaaagcctgacttcttcttccagtatct
gtaagcttttttttttttttcagaataccaaggtcttgtcatacttatag
gaaatagaacagaggctcgttgagagcccaccatgacagcaacactagat
tttcaatacactaacacaattagaaagtgtacattaaatgcacttacatt
aactaccatagcagaaactaatgtaattttacatgactaaccaaaaaaaa
aaaaaaaaaagaattaggagccttaacacaccagtatatttgctcaaatc
aagaaatgtccattttatctactacaatgtcacctcatacaaggcagctg
tcagttttcaaatttgtcttgcaattgatcaggaaaggctttcaaaggaa
actgtactttttttccccaatatggaatgatttccagactagggctgatg
agccgaaaatcggcactaagggagagagggtcatactcctatcataagtt
ggaggcagtttctacgctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33220338_33220876
seq2: B6Ng01-033C21.b_268_804 (reverse)

seq1  AATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAGAGGGCACAGGG  50
      ||||||| |||| ||||||||||||||||||||||||||| |||||||||
seq2  AATCAAC-AGATGGATAAACCCTTAGCTAGACTCACTAGAAGGCACAGGG  49

seq1  ACAACATCCTATTTAACAAAATCAGAAATG-AAAAGGGAGACATAACAAC  99
      ||||||||||| |||||||||||||||||| |||||||||||||||||||
seq2  ACAACATCCTAATTAACAAAATCAGAAATGAAAAAGGGAGACATAACAAC  99

seq1  AGATCCTGGAGAAATCCAAAACACCATCGGATCCTTCTACAAAAGGATAT  149
      ||||| || ||||||||||||||||||| ||||||||||||||||| |||
seq2  AGATCTTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTAT  149

seq1  ACTCAACAAAACTGGAAAACCTGGATGAAATGGACAAATTTCTAGACAGA  199
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACAAAACTGGAAAACCTGGATGAAATGGACAAATTTCTAGACAGA  199

seq1  TACCAGGTACCAAAGTTAAATCAGGATCAATTTAACGATCTAAACATTCC  249
      |||||||||||||||||||||||||||||| |||||| |||||| | |||
seq2  TACCAGGTACCAAAGTTAAATCAGGATCAAGTTAACGTTCTAAAAAGTCC  249

seq1  CATATCCCCTAAAGAAATAGAATCAGTCATTAGTAGTCTCCCAGCCAAAA  299
      |||||||||||| ||||||||| ||||||||| |||||||||| ||||||
seq2  CATATCCCCTAAGGAAATAGAAGCAGTCATTAATAGTCTCCCAACCAAAA  299

seq1  AAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTACCAGACCTTCAA  349
      ||||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  AAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTACC--ACCTTCAA  347

seq1  AGAAGATCTAATTCCAGTTCTGCATAAAGTATTCCACAAAATAGAAGTAG  399
      |||||||||||||||||||||||| ||| |||||||||||||||||||||
seq2  AGAAGATCTAATTCCAGTTCTGCACAAACTATTCCACAAAATAGAAGTAG  397

seq1  ATGGAACTCTACCCAACTCATTCTATGAAGCCACAATTACTCTGATACCT  449
      | ||||||||| |||||||||||||||||| |||||||||||||||||||
seq2  AGGGAACTCTATCCAACTCATTCTATGAAGGCACAATTACTCTGATACCT  447

seq1  AAACCACAGAAAGATCCAAAAAAGATAGAGAACTTCAGACCAATTTCCCT  499
      |||||||| |||||||||| |||||||||||||||||||||| |||||||
seq2  AAACCACAAAAAGATCCAACAAAGATAGAGAACTTCAGACCATTTTCCCT  497

seq1  TATGAATATAGATGCAAAAATCCTCAATAAAATTCTCGCT  539
      ||||||||| |||||||||||||||||||||||||| |||
seq2  TATGAATATCGATGCAAAAATCCTCAATAAAATTCTTGCT  537