BAC Information

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BAC

Clone NameB6Ng01-033D06
Chromosome7 (Build37)
Map Location 120,885,530 - 121,000,955
singlet/doubletdoublet
Overlap geneSpon1
Upstream geneTead1, 4632411J06Rik, LOC434227, Arntl, A630005I04Rik, Btbd10, Pth, LOC100042736, Mlstd2, EG434228
Downstream geneRras2, LOC668451, Copb1, Psma1, 4933406I18Rik, Pde3b, Cyp2r1, Calca, LOC100043295, Calcb, Insc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033D06.bB6Ng01-033D06.g
ACCDH862324DH862325
length1951,000
definitionDH862324|Mus musculus domesticus DNA, BAC clone: B6Ng01-033D06, 5' end.DH862325|Mus musculus domesticus DNA, BAC clone: B6Ng01-033D06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,885,530 - 120,885,724)(120,999,947 - 121,000,955)
sequence
tctctttcacaggggtgttgcctgcacaagcatgctctctcatctacatg
tcatggtctctcctactgggtgtgtcatctacatatcaaagtttgtaagg
acttaaaataggtgagtgtatgtaaatgtgtgtgtgtgcctgtgtgtata
tgtgtgtgcccatgtgtgggtatgtgtataaatgtatgtgtatta
gaattctctttaaaactcatgttagcctgaatttgtgatcttcctgcctc
agtctcccaagttctgggattatgatgtgacagggtagaggtccctccag
tttgtatccttgatgaggccatttcgggttgaattagagtttgatctcct
tgatggagaatcccatggaaaactacccaactctatggtaaaaacccaag
gtcaagatgcctagctgacttagcttctattaaattatttgcttgcactg
aatgccccttccagataatcacttaacttagcttctgccaaactgcttgt
ttatacgaagcccccaacctcccccacaccccctatgcagctgccaagag
tgagatgccaggatgtggtttctgcattccagtgccccatgttctagaca
cttggggctatgcttaggttacgaatgcctgggtatagtccttgccagct
gaaataaagactttccattggctataaactgtgtccaagtggtcatgtct
ggtgggatcccataacgatgggcatataccatcagagccaagcagtgctg
aggactacacctagagcttacagcatgtggggcgagccctctataaagtg
agatacagtccgagcccttacctaggctctgtttgcaattccacaaccac
cccacaatgtagacttaggccagaaaccaaaacaagtgggtctttatctt
cagagatgacgatgatctttgtcttatttcagacgtaggacaatcaccac
aatggcaataaccagaggtgtggccttgtgtctggcttctatcaggtaat
atttattttacaagaactcatctgatcctggtaacaactcctgaggcagc
tcctgccattatccctgtttgacagggggataatttgagacacggggaat
ttcagtgtctggggcaattcagatggttgaatagaggccccagaactcct
gcctcatccacaagaagatcaaatacaggggacatcttcatctgaaagga

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_120885530_120885724
seq2: B6Ng01-033D06.b_53_247

seq1  TCTCTTTCACAGGGGTGTTGCCTGCACAAGCATGCTCTCTCATCTACATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCACAGGGGTGTTGCCTGCACAAGCATGCTCTCTCATCTACATG  50

seq1  TCATGGTCTCTCCTACTGGGTGTGTCATCTACATATCAAAGTTTGTAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTCTCTCCTACTGGGTGTGTCATCTACATATCAAAGTTTGTAAGG  100

seq1  ACTTAAAATAGGTGAGTGTATGTAAATGTGTGTGTGTGCCTGTGTGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAAATAGGTGAGTGTATGTAAATGTGTGTGTGTGCCTGTGTGTATA  150

seq1  TGTGTGTGCCCATGTGTGGGTATGTGTATAAATGTATGTGTATTA  195
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGCCCATGTGTGGGTATGTGTATAAATGTATGTGTATTA  195

seq1: chr7_120999947_121000955
seq2: B6Ng01-033D06.g_69_1068 (reverse)

seq1  TCCTTTCAGATTGAGGCTGTTCCCCTGTTATTTTGATCTTTCTTTGTGGA  50
      |||||||||| ||| | || ||||||||   |||||||||   |||||||
seq2  TCCTTTCAGA-TGAAGATG-TCCCCTGT--ATTTGATCTT--CTTGTGGA  44

seq1  TGAGGCAGGGAGTTCTGGGTGCCTCTATTCAACCATCTTGAATTGCCCCA  100
      ||||||| ||||||||||| ||||||||||||||||| ||||||||||||
seq2  TGAGGCA-GGAGTTCTGGG-GCCTCTATTCAACCATC-TGAATTGCCCCA  91

seq1  GACACTTGAAATTCCCCGTGTCTCAAATTATCCCCCTGTCAAACAGGGAT  150
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAC-TGAAATTCCCCGTGTCTCAAATTATCCCCCTGTCAAACAGGGAT  140

seq1  AATGGCAGGAGCTGCCTCAGGAGTTGTTACCAGGATCAGATGAGTTCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAGGAGCTGCCTCAGGAGTTGTTACCAGGATCAGATGAGTTCTTG  190

seq1  T-AAATAAATATTACCTGATAGAAGCCAGACACAAGGCCACACCTCTGGT  249
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAATATTACCTGATAGAAGCCAGACACAAGGCCACACCTCTGGT  240

seq1  TATTGCCATTGTGGTGATTGTCCTACGTCTGAAATAAGACAAAGATCATC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCCATTGTGGTGATTGTCCTACGTCTGAAATAAGACAAAGATCATC  290

seq1  GTCATCTCTGAAGATAAAGACCCACTTGTTTTGGTTTCTGGCCTAAGTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTCTGAAGATAAAGACCCACTTGTTTTGGTTTCTGGCCTAAGTCT  340

seq1  ACATTGTGGGGTGGTTGTGGAATTGCAAACAGAGCCTAGGTAAGGGCTCG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTGGGGTGGTTGTGGAATTGCAAACAGAGCCTAGGTAAGGGCTCG  390

seq1  GACTGTATCTCACTTTATAGAGGGCTCGCCCCACATGCTGTAAGCTCTAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTATCTCACTTTATAGAGGGCTCGCCCCACATGCTGTAAGCTCTAG  440

seq1  GTGTAGTCCTCAGCACTGCTTGGCTCTGATGGTATATGCCCATCGTTATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGTCCTCAGCACTGCTTGGCTCTGATGGTATATGCCCATCGTTATG  490

seq1  GGATCCCACCAGACATGACCACTTGGACACAGTTTATAGCCAATGGAAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCCACCAGACATGACCACTTGGACACAGTTTATAGCCAATGGAAAG  540

seq1  TCTTTATTTCAGCTGGCAAGGACTATACCCAGGCATTCGTAACCTAAGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTTCAGCTGGCAAGGACTATACCCAGGCATTCGTAACCTAAGCA  590

seq1  TAGCCCCAAGTGTCTAGAACATGGGGCACTGGAATGCAGAAACCACATCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCCAAGTGTCTAGAACATGGGGCACTGGAATGCAGAAACCACATCC  640

seq1  TGGCATCTCACTCTTGGCAGCTGCATAGGGGGTGTGGGGGAGGTTGGGGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCTCACTCTTGGCAGCTGCATAGGGGGTGTGGGGGAGGTTGGGGG  690

seq1  CTTCGTATAAACAAGCAGTTTGGCAGAAGCTAAGTTAAGTGATTATCTGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGTATAAACAAGCAGTTTGGCAGAAGCTAAGTTAAGTGATTATCTGG  740

seq1  AAGGGGCATTCAGTGCAAGCAAATAATTTAATAGAAGCTAAGTCAGCTAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGCATTCAGTGCAAGCAAATAATTTAATAGAAGCTAAGTCAGCTAG  790

seq1  GCATCTTGACCTTGGGTTTTTACCATAGAGTTGGGTAGTTTTCCATGGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTGACCTTGGGTTTTTACCATAGAGTTGGGTAGTTTTCCATGGGA  840

seq1  TTCTCCATCAAGGAGATCAAACTCTAATTCAACCCGAAATGGCCTCATCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCATCAAGGAGATCAAACTCTAATTCAACCCGAAATGGCCTCATCA  890

seq1  AGGATACAAACTGGAGGGACCTCTACCCTGTCACATCATAATCCCAGAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATACAAACTGGAGGGACCTCTACCCTGTCACATCATAATCCCAGAAC  940

seq1  TTGGGAGACTGAGGCAGGAAGATCACAAATTCAGGCTAACATGAGTTTTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGACTGAGGCAGGAAGATCACAAATTCAGGCTAACATGAGTTTTA  990

seq1  AAGAGAATTC  1009
      ||||||||||
seq2  AAGAGAATTC  1000