BAC Information

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BAC

Clone NameB6Ng01-033D08
Chromosome7 (Build37)
Map Location 20,861,227 - 20,862,135
singlet/doubletsinglet
Overlap genenone
Upstream geneC79127, Rtn2, Fosb, D830036C21Rik, Ercc1, Cd3eap, Ppp1r13l, Ercc2, Klc3, Ckm, Mark4, 4933417E01Rik, Bloc1s3, Trappc6a, Nkpd1, BC024868, Gemin7, Zfp296, Sfrs16, Relb, Clptm1, Apoc2, Apoc4, Apoc1, Apoe, Tomm40, Pvrl2, Bcam, Cblc, Bcl3, Ceacam16, Ceacam19, Pvr, 2210010C17Rik, EG243872, Ceacam20, Nlrp9b, EG667040, EG667067, LOC620401, V1rd21, EG620537, LOC100043519, EG620574, LOC100043523, EG545926
Downstream geneLOC100043528, LOC100042964, LOC100042966, LOC100043533, EG435949, LOC100043536, LOC100042968, LOC100042971, EG667129, EG667135, EG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033D08.bB6Ng01-033D08.g
ACCDH862328DH862329
length620911
definitionDH862328|Mus musculus domesticus DNA, BAC clone: B6Ng01-033D08, 5' end.DH862329|Mus musculus domesticus DNA, BAC clone: B6Ng01-033D08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaaaccatacgaagctcaagaagaaaggagacaaaagtgtggg
tgcttcggtccttcttagaaggagaacaaaatactcacaggagcaaatat
ggagataaagagtagagcaaaaactggaggaaaagtaatccagagactgt
cccacctgaagattcatcccatatacagttaccaaacccagacaactttg
tggatgccaagaagtgcatcgagaaagaggctggtatggctgtctcctga
gtgaccctgccagagccttacaaatacagggacagatgctcaaaaccaat
cattggactgagcatagggtccacaatagagtagttagagaaaggaacaa
aggagttgaaggggattgcagtcccataggaagaacaacaatatcaacca
accagtcccccaagagctcccagggaacaaggagtacacgaagctccagc
agcagaagttgcagaggatgtccttgtcatgcatcagtgggcggagtggt
tcttggtcctatgaaggctcaatagatgccccagtgtaggtgaactgagg
gcagagaggtggtactgggtaggtgtgtagaggaacaccttcatagaagc
agggggagaagggattgtat
gaattcaattcctgagaccaacacatggaaggagagcactgactcctgga
aattactatctcttacacactgaataaagaaataaaagttttcttaaagt
aaataaatatttgtggaatgtgtgaaatcagagcagcggagaaggtgtag
tcatacttcctagacctgtgttaacttgtgggtcttgaccccttggggag
gttgaatgacctatccacaggggtcagatatcaaatatccagcccatcag
atacttacatgatcattaataacagtagtaaagttgcagttatgaagtag
gaatgaaaatcatgttatggttgggggtcaacacaacacatcactaaggt
agagaacactgatctagattcttaacccaggattcagcgttctagaatca
cctggcatctgtaaccatcactgaggacccgttcccacctgcagctgtcc
cctgacatcagccaaggtttcagagtaccctcggtgactgcgactcctct
catcatgcaccacacaggaaaaatggtctgctcagtagactcaaaggaga
aaaacagaaaagatgtaacatctctctgtactcccaggtttttgtactcc
taagtctttgtaaactagaaaatgactcaataaagagaggtccaaaagca
aagcaccaaaaacctcatgctgaagaagagatcacttaaaatgatacctt
ttctgttttgtttactggtgtgtatgcgtgcatgtatgtgcgtgcatccc
catgtctaggcgtggcagtcagaggacagctttaggagaatcagtgagtc
cccagagtcagactcaggctcttcaggctttgcagcaatattttctttgg
gggacacaatgacaacactggaccagactggacagggcaacagggtggag
ttctagcttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_20861227_20862135
seq2: B6Ng01-033D08.g_69_979

seq1  GAATTCAATTCCTGAGACCAACACATGGAAGGAGAGCACTGACTCCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCCTGAGACCAACACATGGAAGGAGAGCACTGACTCCTGGA  50

seq1  AATTACTATCTCTTACACACTGAATAAAGAAATAAAAGTTTTCTTAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTATCTCTTACACACTGAATAAAGAAATAAAAGTTTTCTTAAAGT  100

seq1  AAATAAATATTTGTGGAATGTGTGAAATCAGAGCAGCGGAGAAGGTGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATATTTGTGGAATGTGTGAAATCAGAGCAGCGGAGAAGGTGTAG  150

seq1  TCATACTTCCTAGACCTGTGTTAACTTGTGGGTCTTGACCCCTTGGGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTTCCTAGACCTGTGTTAACTTGTGGGTCTTGACCCCTTGGGGAG  200

seq1  GTTGAATGACCTATCCACAGGGGTCAGATATCAAATATCCAGCCCATCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATGACCTATCCACAGGGGTCAGATATCAAATATCCAGCCCATCAG  250

seq1  ATACTTACATGATCATTAATAACAGTAGTAAAGTTGCAGTTATGAAGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTACATGATCATTAATAACAGTAGTAAAGTTGCAGTTATGAAGTAG  300

seq1  GAATGAAAATCATGTTATGGTTGGGGGTCAACACAACACATCACTAAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAAATCATGTTATGGTTGGGGGTCAACACAACACATCACTAAGGT  350

seq1  AGAGAACACTGATCTAGATTCTTAACCCAGGATTCAGCGTTCTAGAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACACTGATCTAGATTCTTAACCCAGGATTCAGCGTTCTAGAATCA  400

seq1  CCTGGCATCTGTAACCATCACTGAGGACCCGTTCCCACCTGCAGCTGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCATCTGTAACCATCACTGAGGACCCGTTCCCACCTGCAGCTGTCC  450

seq1  CCTGACATCAGCCAAGGTTTCAGAGTACCCTCGGTGACTGCGACTCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACATCAGCCAAGGTTTCAGAGTACCCTCGGTGACTGCGACTCCTCT  500

seq1  CATCATGCACCACACAGGAAAAATGGTCTGCTCAGTAGACTCAAAGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGCACCACACAGGAAAAATGGTCTGCTCAGTAGACTCAAAGGAGA  550

seq1  AAAACAGAAAAGATGTAACATCTCTCTGTACTCCCAGGTTTTTGTACTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGAAAAGATGTAACATCTCTCTGTACTCCCAGGTTTTTGTACTCC  600

seq1  TAAGTCTTTGTAAACTAGAAAATGACTCAATAAAGAGAGGTCCAAAAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTTTGTAAACTAGAAAATGACTCAATAAAGAGAGGTCCAAAAGCA  650

seq1  AAGCACCAAAAACCTCATGCTGAAGAAGAGATCACTTAAAATGATACCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCAAAAACCTCATGCTGAAGAAGAGATCACTTAAAATGATACCTT  700

seq1  TTCTGTTTTGTTTACTGGTGTGTATGCGTGCATGTATGTGCGTGCATCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTTGTTTACTGGTGTGTATGCGTGCATGTATGTGCGTGCATCCC  750

seq1  CATGTCTAGGCGTGGCAGTCAGAGGACAGC-TTAGGAGAATCAGTGAGTC  799
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CATGTCTAGGCGTGGCAGTCAGAGGACAGCTTTAGGAGAATCAGTGAGTC  800

seq1  CCCAGAGTCAGACTCAGGCTC-TCAGGCTTTGCAGCAATATTTTCTTTGG  848
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCCAGAGTCAGACTCAGGCTCTTCAGGCTTTGCAGCAATATTTTCTTTGG  850

seq1  GGGACAACAATGACAACACTGGACCAGACTGGACAGGGC-ACAGGGTGGA  897
      ||||| ||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGGAC-ACAATGACAACACTGGACCAGACTGGACAGGGCAACAGGGTGGA  899

seq1  GTTCTAGCTTCA  909
      ||||||||||||
seq2  GTTCTAGCTTCA  911