BAC Information

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BAC

Clone NameB6Ng01-033F23
Chromosome7 (Build37)
Map Location 97,063,932 - 97,253,800
singlet/doubletdoublet
Overlap genel7Rn6, Eed, E230029C05Rik
Upstream geneTmem135, LOC100039969, Fzd4, Prss23, LOC100040001, Me3, Ccdc81
Downstream geneEG384719, 2310010J17Rik, Picalm, Ccdc83, Sytl2, Ccdc89, Crebzf, Tmem126a, Tmem126b, B230218P12Rik, LOC666689, LOC621816, LOC100039943, Dlg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033F23.bB6Ng01-033F23.g
ACCDH862438DH862439
length1,089944
definitionDH862438|Mus musculus domesticus DNA, BAC clone: B6Ng01-033F23, 5' end.DH862439|Mus musculus domesticus DNA, BAC clone: B6Ng01-033F23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,063,932 - 97,065,031)(97,252,858 - 97,253,800)
sequence
gaattctcttatttctgtagcttgtatatttttccatgacttctgtgtat
ttcaacattccttggttttaaaaaagctttaagtataatctacatacaca
attccccatttaaagaatacagtacttttagtttactcaaggcagtgtca
gcggtatccacaggctgacttgtagagcaccgtttctgtttgataacttt
taccttttttattctggaatacttccatcctcccacaaggcagcctcccc
tccagtaacagttaatcctaccctgtaacccacagtggccttaagcaacc
actgacctgtccgtctccagactcgccttttctagatattttactcaaat
taaatcagtatgtagtcttttagtattggtttccttcacttaccatgttt
tcaagattgtccatgccatagctatgtataattcatttttttaaaaagat
tttatttattttacatatgtgagtacactgtcgctgtcttcagacacacc
agaagagggcatcagatcccattacagatggttgtgagccaccatgtggt
tgctgggaattaaactcaggatctctggaagagcagtcagtcctcttcac
aactgaaccatgtctccagccttaattcattcttttctattgcaaataaa
atatgccattatagggacacagaacaccatatccagcctcagttgacgga
caactgtgttgcttccatctttttgggctactaagagtaatgttattgac
atctatgttctatgtttcacaagaatgtttttcttttttaaaaagcagat
ttattattttaaattatatgtctgtgtatatgtctacagaggccagaggt
gtcaggtcccctgaagctgggttatcaggtgatgctgagccacccaacat
gggtgctgggagtgactgggtcttctgcaagacagtccaagctttcagtc
acttagctatccctccatccactatcatcattccccttcgcactccctta
gaacatcttggactgttctaaattagaattgactaaaaatcaaaataatg
aatttaatgttccattatttatgtaacttagaaattcct
gaattcagtgaatagcatccccagtgagttcagtattcagtgaatagggc
tggctgatcaatgcgtcagattgagtctctgcaggagatgtgttttccct
acccatcgaggagtctgagattatttctctggaggtatcactgagaatga
agttttaactatcatgtcagttcagaacatgattcacaatgatgaagagc
ccaggttcaaggcatttgttgactctctggatgttaatcgggtagcccgt
gccatctgagggccaccatcttgatcaacatctctattgtctcaaggcag
aaatgctactggaggaagaagatcagcaagcccccccacattgttctgta
ctgagaaatcactggcctatgctgtgtgctccttccctatctacgggggc
actgctgctgtagatgatagctacacttcagccagggacagcacaatcac
atgggtgactccaataaggccacctttgatgccatctccaagacctctag
ctcacctgatctccaacctctggaaagaatcagatcagaatctcctgatc
agaaattcgcagagcattctgttaaacctgcaccaaaggcttcatataga
agaggcaggctttagccatggttaccacatggaatttttataaaacaaaa
gagtgaggctggtgtggtggcacagggttttgaacccagcacttgggtgg
cagacataggcagatctctatagtatgaggccagccttggtctacatggt
gagttctaggccagtcaagaatatacagtgagtccactatgttcatagca
gcctttgtttattatagccagagcttggaaagacccagatgcccctcaac
agaggaatggatacagaaaatgtggtacatttacacaatgcattactact
cagctattaaaaagattgaatttatgaaattcctaggcaatgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_97063932_97065031
seq2: B6Ng01-033F23.b_48_1136

seq1  GAATTCTCTTATTTCTGTAGCTTGTATATTTTTCCATGACTTCTGTGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTATTTCTGTAGCTTGTATATTTTTCCATGACTTCTGTGTAT  50

seq1  TTCAACATTCCTTGGTTTTAAAAAAGCTTTAAGTATAATCTACATACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATTCCTTGGTTTTAAAAAAGCTTTAAGTATAATCTACATACACA  100

seq1  ATTCCCCATTTAAAGAATACAGTACTTTTAGTTTACTCAAGGCAGTGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCATTTAAAGAATACAGTACTTTTAGTTTACTCAAGGCAGTGTCA  150

seq1  GCGGTATCCACAGGCTGACTTGTAGAGCACCGTTTCTGTTTGATAACTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTATCCACAGGCTGACTTGTAGAGCACCGTTTCTGTTTGATAACTTT  200

seq1  TACCTTTTTTATTCTGGAATACTTCCATCCTCCCACAAGGCAGCCTCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTTTTATTCTGGAATACTTCCATCCTCCCACAAGGCAGCCTCCCC  250

seq1  TCCAGTAACAGTTAATCCTACCCTGTAACCCACAGTGGCCTTAAGCAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTAACAGTTAATCCTACCCTGTAACCCACAGTGGCCTTAAGCAACC  300

seq1  ACTGACCTGTCCGTCTCCAGACTCGCCTTTTCTAGATATTTTACTCAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACCTGTCCGTCTCCAGACTCGCCTTTTCTAGATATTTTACTCAAAT  350

seq1  TAAATCAGTATGTAGTCTTTTAGTATTGGTTTCCTTCACTTACCATGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAGTATGTAGTCTTTTAGTATTGGTTTCCTTCACTTACCATGTTT  400

seq1  TCAAGATTGTCCATGCCATAGCTATGTATAATTCATTTTTTTAAAAAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATTGTCCATGCCATAGCTATGTATAATTCATTTTTTTAAAAAGAT  450

seq1  TTTATTTATTTTACATATGTGAGTACACTGTCGCTGTCTTCAGACACACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTTACATATGTGAGTACACTGTCGCTGTCTTCAGACACACC  500

seq1  AGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGT  550

seq1  TGCTGGGAATTAAACTCAGGATCTCTGGAAGAGCAGTCAGTCCTCTTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAATTAAACTCAGGATCTCTGGAAGAGCAGTCAGTCCTCTTCAC  600

seq1  AACTGAACCATGTCTCCAGCCTTAATTCATTCTTTTCTATTGCAAATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAACCATGTCTCCAGCCTTAATTCATTCTTTTCTATTGCAAATAAA  650

seq1  ATATGCCATTATAGGGACACAGAACACCATATCCAGCCTCAGTTGACGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCCATTATAGGGACACAGAACACCATATCCAGCCTCAGTTGACGGA  700

seq1  CAACTGTGTTGCTTCCATCTTTTTGGGCTACTAAGAGTAATGTTATTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTGTTGCTTCCATCTTTTTGGGCTACTAAGAGTAATGTTATTGAC  750

seq1  ATCTATGTTCTATGTTTCACAAGAATGTTTTTCTTTTTTAAAAAGCAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGTTCTATGTTTCACAAGAATGTTTTTCTTTTTTAAAAAGCAGAT  800

seq1  TTATTATTTTAAATTATATGTCTGTGTATATGTCTACAGAGGCCAGAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTTTAAATTATATGTCTGTGTATATGTCTACAGAGGCCAGAGGT  850

seq1  GTCAGGTCCCCTGAAGCTGGGTTA-CAGGTGATGCTGAGCCACCCAACAT  899
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTCAGGTCCCCTGAAGCTGGGTTATCAGGTGATGCTGAGCCACCCAACAT  900

seq1  GGGTGCTGGGAGTGAACTTGGGTCCTCTGCAAGAACAGTCCGAGCTTTCA  949
      |||||||||||||||   |||||| |||||||| ||||||| ||||||||
seq2  GGGTGCTGGGAGTGA--CTGGGTCTTCTGCAAG-ACAGTCCAAGCTTTCA  947

seq1  GTCACTTAGCTATCCCTCCAATCCACTATCATCATTCCCCTTCGCACTCC  999
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTCACTTAGCTATCCCTCC-ATCCACTATCATCATTCCCCTTCGCACTCC  996

seq1  CTTAG-ACATCTTGGACTGTTCTAAATTAAGTACATAGACTAAAAAATCA  1048
      ||||| |||||||||||||||||||||||     || |||| ||||||||
seq2  CTTAGAACATCTTGGACTGTTCTAAATTA---GAATTGACT-AAAAATCA  1042

seq1  AAAATAAATGATTTTAATGTTCCCATTATTTTATGTAACATTAGAAATTC  1098
      |||   ||||| ||||||||| |||||| |||||||||| ||||||||||
seq2  AAA--TAATGAATTTAATGTT-CCATTA-TTTATGTAAC-TTAGAAATTC  1087

seq1  CT  1100
      ||
seq2  CT  1089

seq1: chr7_97252858_97253800
seq2: B6Ng01-033F23.g_68_1011 (reverse)

seq1  TCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTTAATAGCTGAGTAG  50
      |||| |||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCCA-TTGCCTAGGAATTTCATAAATTCAATCTTTTTAATAGCTGAGTAG  49

seq1  TACTGCATTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGA  100
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCATTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGA  99

seq1  GGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAAC-AAGGCTGCT  149
      |||||||||||| ||||||||   ||||||||| |||||| |||||||||
seq2  GGGGCATCTGGG-TCTTTCCAAGCTCTGGCTATAATAAACAAAGGCTGCT  148

seq1  ATGAACATAGTGGACTCACTGTATATTCTTGACTGGCCTAGAACTCACCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACATAGTGGACTCACTGTATATTCTTGACTGGCCTAGAACTCACCA  198

seq1  TGTAGACC-AGGCTGGCCTCATACTATAGAGATCTGCCTATGTCTGCCAC  248
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACCAAGGCTGGCCTCATACTATAGAGATCTGCCTATGTCTGCCAC  248

seq1  CCAAGTGCTGGGTTCAAAACCCTGTGCCACCACACCAGCCTCACTCTTTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGCTGGGTTCAAAACCCTGTGCCACCACACCAGCCTCACTCTTTT  298

seq1  G-TTTATAAAAATTCCATGTGGTAACCATGGCTAAAGCCTGCCTCTTCTA  347
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATAAAAATTCCATGTGGTAACCATGGCTAAAGCCTGCCTCTTCTA  348

seq1  TATGAAGCCTTTGGTGCAGGTTTAACAGAATGCTCTGCGAATTTCTGATC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGCCTTTGGTGCAGGTTTAACAGAATGCTCTGCGAATTTCTGATC  398

seq1  AGGAGATTCTGATCTGATTCTTTCCAGAGGTTGGAGATCAGGTGAGCTAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATTCTGATCTGATTCTTTCCAGAGGTTGGAGATCAGGTGAGCTAG  448

seq1  AGGTCTTGGAGATGGCATCAAAGGTGGCCTTATTGGAGTCACCCATGTGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTGGAGATGGCATCAAAGGTGGCCTTATTGGAGTCACCCATGTGA  498

seq1  TTGTGCTGTCCCTGGCTGAAGTGTAGCTATCATCTACAGCAGCAGTGCCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTGTCCCTGGCTGAAGTGTAGCTATCATCTACAGCAGCAGTGCCC  548

seq1  CCGTAGATAGGGAAGGAGCACACAGCATAGGCCAGTGATTTCTCAGTACA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTAGATAGGGAAGGAGCACACAGCATAGGCCAGTGATTTCTCAGTACA  598

seq1  GAACAATGTGGGGGGGCTTGCTGATCTTCTTCCTCCAGTAGCATTTCTGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATGTGGGGGGGCTTGCTGATCTTCTTCCTCCAGTAGCATTTCTGC  648

seq1  CTTGAGACAATAGAGATGTTGATCAAGATGGTGGCCCTCAGATGGCACGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGACAATAGAGATGTTGATCAAGATGGTGGCCCTCAGATGGCACGG  698

seq1  GCTACCCGATTAACATCCAGAGAGTCAACAAATGCCTTGAACCTGGGCTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCCGATTAACATCCAGAGAGTCAACAAATGCCTTGAACCTGGGCTC  748

seq1  TTCATCATTGTGAATCATGTTCTGAACTGACATGATAGTTAAAACTTCAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCATTGTGAATCATGTTCTGAACTGACATGATAGTTAAAACTTCAT  798

seq1  TCTCAGTGATACCTCCAGAGAAATAATCTCAGACTCCTCGATGGGTAGGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTGATACCTCCAGAGAAATAATCTCAGACTCCTCGATGGGTAGGG  848

seq1  AAAACACATCTCCTGCAGAGACTCAATCTGACGCATTGATCAGCCAGCCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACATCTCCTGCAGAGACTCAATCTGACGCATTGATCAGCCAGCCC  898

seq1  TATTCACTGAATACTGAACTCACTGGGGATGCTATTCACTGAATTC  943
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACTGAATACTGAACTCACTGGGGATGCTATTCACTGAATTC  944