BAC Information

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BAC

Clone NameB6Ng01-033G03
Chromosome7 (Build37)
Map Location 38,650,167 - 38,742,577
singlet/doubletdoublet
Overlap geneEG627844
Upstream geneLOC100043874, Zfp536, LOC100043453
Downstream geneC80913, Ccne1, 1600014C10Rik, Plekhf1, Pop4, LOC668519, LOC100043464, 1700010N08Rik, EG627975, EG625594, EG627983, EG434171, LOC100043467
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033G03.bB6Ng01-033G03.g
ACCDH862446DH862447
length967973
definitionDH862446|Mus musculus domesticus DNA, BAC clone: B6Ng01-033G03, 5' end.DH862447|Mus musculus domesticus DNA, BAC clone: B6Ng01-033G03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,741,608 - 38,742,577)(38,650,167 - 38,651,145)
sequence
gaattcttcagttgcagttcacttagtgtgcttattttttttttaaagtt
attttctctgtatgggtgtgagctagagtgtatgtatgtgtaccacgagt
gtgaatgagctggcagatggcaggagagggcgttggatctccagagctgg
agttgcaggtggttgggggtcaccgtgtgagcgctgggaaccagacccag
gtcctctctgagaacaacatgcacttttaacctctgagccatctctccag
ccctcctaatggatacttttttttggaaccagggtctctttgtgtcctat
aattcagtgtagactaggctgacctctaactcacttgtctttgcctccca
agtgctgagataaaaggcatgtgctactacaccccaacacaaaatgttcc
atttttgtgttttgagacatggtttctctgagtatagccctgctgtcctg
gaacttgctgactttgaactcagagatccacctgcctctgccccctgagt
gctgggatttaaggcgtgcatcactactgcctggcaagagcgtccgtttt
aaagtgagtgttgagttacttatttacaggactatcatctagtgtaaact
gtttatagttccctcaccagtgactcacaagaatgtgagctcttgctcag
ttggtatttctgtatcagctttgtattcacggtgtgtgtgtattccatag
ggtttcttacatacaggatcgggttgtatataagtcttactgtcatggct
cccccctcccccgtgagaattctgtttttgagaatggtggtagatctggc
tgtgctgactagaatctctagtaaacacgactgaacattttgccttggtg
gtggtggtagaaaccaggtctaaatggtttgtcactaaatgtggctgttt
aaaataaacctcctttggagatgttattgttagtgcacaggtgtttcttg
agtgtcttcttgactta
gaattctaggaaaatttagccaaatctgatcctcgtcagtggagtcaaac
tgagtctgtgactccatctccatccacccccatgcaagcacccagtgcca
tgtaggaggagtggatgggccaagaaaatttacctctgcaaaatgaagac
agacaaatggccaagtcaacgtcacagacagtgttgaaggacaatgtatg
cagaaccaggcaaatcttcacatggcctgcatggtgacaattgaggtgat
gtgcacggacaggactgcgtgaaacagaatagtacctgacccatcgttcc
tgggcaggggaccttgcacaagaaccatatattcttcttctttctatttt
ttagatttatttatttatttattttatttatgtgagtacactgtcactgt
cttcagacacacctgaagaagccatcagatcccattacagatggttgtga
gccaccgtgtggttgctgggacttgaactcaggacctctggaagaacagt
cagtgctctgaattgctgagcccatctctccagccccaaagacaatatat
tctgcacccccaaaacagcacagatcattcccatcaagccacagattgcc
ctttgacccaaagacaacctgctgcgggtagctgccttagcaggaaagat
gaaactctagcaagcaggaaggctcgcccaggaacctaatgagcaggtac
ggctcctccctagcagggagagcaccacagtcaggagaggagccaagaca
ggcagggggaataagaaataaacaaaacagacaggaagaaaggatacggg
tgagaaggaggagaggaaggaaacctctccgcaacagagtaaagctggaa
cgcagcactgctgggttcgacttctggtcctttgtttaaaggtgaaacag
agatggagagagtcggacacagagacagagacaggacagggacacagaaa
gacgagacagagagactggagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_38741608_38742577
seq2: B6Ng01-033G03.b_44_1010 (reverse)

seq1  TAAGTCAGGAAGACACTCAAGAAAACACCTGTGCACTAACAATAACCTTC  50
      ||||||| ||||||||||||| ||||||||||||||||||||||| | ||
seq2  TAAGTCAAGAAGACACTCAAG-AAACACCTGTGCACTAACAATAA-CATC  48

seq1  TCCAAAGGAGGTTTTATTTTAAACAGCCACATTTAGTGACAAACCATTTA  100
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGGAGG-TTTATTTTAAACAGCCACATTTAGTGACAAACCATTTA  97

seq1  GACCTGGTTTCTACCACCACCACCAAGGCAAAATGTTCAGTCGTGTTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGTTTCTACCACCACCACCAAGGCAAAATGTTCAGTCGTGTTTAC  147

seq1  TAGAGATTCTAGTCAGCACAGCCAGATCTACCACCATTCTCAAAAACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATTCTAGTCAGCACAGCCAGATCTACCACCATTCTCAAAAACAGA  197

seq1  ATTCTCACGGGGGAGGGGGGAGCCATGACAGTAAGACTTATATACAACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCACGGGGGAGGGGGGAGCCATGACAGTAAGACTTATATACAACCC  247

seq1  GATCCTGTATGTAAGAAACCCTATGGAATACACACACACCGTGAATACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTGTATGTAAGAAACCCTATGGAATACACACACACCGTGAATACAA  297

seq1  AGCTGATACAGAAATACCAACTGAGCAAGAGCTCACATTCTTGTGAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATACAGAAATACCAACTGAGCAAGAGCTCACATTCTTGTGAGTCA  347

seq1  CTGGTGAGGGAACTATAAACAGTTTACACTAGATGATAGTCCTGTAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGAGGGAACTATAAACAGTTTACACTAGATGATAGTCCTGTAAATA  397

seq1  AGTAACTCAACACTCACTTTAAAACGGACGCTCTTGCCAGGCAGTAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTCAACACTCACTTTAAAACGGACGCTCTTGCCAGGCAGTAGTGA  447

seq1  TGCACGCCTTAAATCCCAGCACTCAGGGGGCAGAGGCAGGTGGATCTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGCCTTAAATCCCAGCACTCAGGGGGCAGAGGCAGGTGGATCTCTG  497

seq1  AGTTCAAAGTCAGCAAGTTCCAGGACAGCAGGGCTATACTCAGAGAAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAAGTCAGCAAGTTCCAGGACAGCAGGGCTATACTCAGAGAAACC  547

seq1  ATGTCTCAAAACACAAAAATGGAACATTTTGTGTTGGGGTGTAGTAGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCAAAACACAAAAATGGAACATTTTGTGTTGGGGTGTAGTAGCAC  597

seq1  ATGCCTTTTATCTCAGCACTTGGGAGGCAAAGACAAGTGAGTTAGAGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTTTATCTCAGCACTTGGGAGGCAAAGACAAGTGAGTTAGAGGTC  647

seq1  AGCCTAGTCTACACTGAATTATAGGACACAAAGAGACCCTGGTTCCAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGTCTACACTGAATTATAGGACACAAAGAGACCCTGGTTCCAAAA  697

seq1  AAAAGTATCCATTAGGAGGGCTGGAGAGATGGCTCAGAGGTTAAAAGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTATCCATTAGGAGGGCTGGAGAGATGGCTCAGAGGTTAAAAGTGC  747

seq1  ATGTTGTTCTCAGAGAGGACCTGGGTCTGGTTCCCAGCGCTCACACGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTTCTCAGAGAGGACCTGGGTCTGGTTCCCAGCGCTCACACGGTG  797

seq1  ACCCCCAACCACCTGCAACTCCAGCTCTGGAGATCCAACGCCCTCTCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCAACCACCTGCAACTCCAGCTCTGGAGATCCAACGCCCTCTCCTG  847

seq1  CCATCTGCCAGCTCATTCACACTCGTGGTACACATACATACACTCTAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGCCAGCTCATTCACACTCGTGGTACACATACATACACTCTAGCT  897

seq1  CACACCCATACAGAGAAAATAACTTTAAAAAAAAAATAAGCACACTAAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCATACAGAGAAAATAACTTTAAAAAAAAAATAAGCACACTAAGT  947

seq1  GAACTGCAACTGAAGAATTC  970
      ||||||||||||||||||||
seq2  GAACTGCAACTGAAGAATTC  967

seq1: chr7_38650167_38651145
seq2: B6Ng01-033G03.g_68_1040

seq1  GAATTCTAGGAAAATTTAGCCAAATCTGATCCTCGTCAGTGGAGTCAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGAAAATTTAGCCAAATCTGATCCTCGTCAGTGGAGTCAAAC  50

seq1  TGAGTCTGTGACTCCATCTCCATCCACCCCCATGCAAGCACCCAGTGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTGTGACTCCATCTCCATCCACCCCCATGCAAGCACCCAGTGCCA  100

seq1  TGTAGGAGGAGTGGATGGGCCAAGAAAATTTACCTCTGCAAAATGAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGAGGAGTGGATGGGCCAAGAAAATTTACCTCTGCAAAATGAAGAC  150

seq1  AGACAAATGGCCAAGTCAACGTCACAGACAGTGTTGAAGGACAATGTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAATGGCCAAGTCAACGTCACAGACAGTGTTGAAGGACAATGTATG  200

seq1  CAGAACCAGGCAAATCTTCACATGGCCTGCATGGTGACAATTGAGGTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCAGGCAAATCTTCACATGGCCTGCATGGTGACAATTGAGGTGAT  250

seq1  GTGCACGGACAGGACTGCGTGAAACAGAATAGTACCTGACCCATCGTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACGGACAGGACTGCGTGAAACAGAATAGTACCTGACCCATCGTTCC  300

seq1  TGGGCAGGGGACCTTGCACAAGAACCATATATTCTTCTTCTTTCTATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGGGGACCTTGCACAAGAACCATATATTCTTCTTCTTTCTATTTT  350

seq1  TTAGATTTATTTATTTATTTATTTTATTTATGTGAGTACACTGTCACTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTTATTTATTTATTTATTTTATTTATGTGAGTACACTGTCACTGT  400

seq1  CTTCAGACACACCTGAAGAAGCCATCAGATCCCATTACAGATGGTTGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGACACACCTGAAGAAGCCATCAGATCCCATTACAGATGGTTGTGA  450

seq1  GCCACCGTGTGGTTGCTGGGACTTGAACTCAGGACCTCTGGAAGAACAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCGTGTGGTTGCTGGGACTTGAACTCAGGACCTCTGGAAGAACAGT  500

seq1  CAGTGCTCTGAATTGCTGAGCCCATCTCTCCAGCCCCAAAGACAATATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTCTGAATTGCTGAGCCCATCTCTCCAGCCCCAAAGACAATATAT  550

seq1  TCTGCACCCCCAAAACAGCACAGATCATTCCCATCAAGCCACAGATTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACCCCCAAAACAGCACAGATCATTCCCATCAAGCCACAGATTGCC  600

seq1  CTTTGACCCAAAGACAACCTGCTGCGGGTAGCTGCCTTAGCAGGAAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACCCAAAGACAACCTGCTGCGGGTAGCTGCCTTAGCAGGAAAGAT  650

seq1  GAAACTCTAGCAAGCAGGAAGGCTCGCCCAGGAACCTAATGAGCAGGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCTAGCAAGCAGGAAGGCTCGCCCAGGAACCTAATGAGCAGGTAC  700

seq1  GGCTCCTCCCTAGCAGGGAGAGCACCACAGTCAGGAGAGGAGCCAAGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTCCCTAGCAGGGAGAGCACCACAGTCAGGAGAGGAGCCAAGACA  750

seq1  GGCAGGGGGAATAAGAAATAAACAAAACAGACAGGAAGAAAGGATACGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGGGAATAAGAAATAAACAAAACAGACAGGAAGAAAGGATACGGG  800

seq1  TGAGAAGGAGGAGAGGAAGGAAACCTCTCCGCAACAGAGTAAAGCTGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGGAGGAGAGGAAGGAAACCTCTCCGCAACAGAGTAAAGCTGGAA  850

seq1  CGCAGCACTGCTGGGCTCGACTTCCTGGTCCTTTGTTTTAAAGGTGAAAC  900
      ||||||||||||||| ||||||| ||||||||||| ||||||||||||||
seq2  CGCAGCACTGCTGGGTTCGACTT-CTGGTCCTTTG-TTTAAAGGTGAAAC  898

seq1  AGAAGATGGAGAGAGTCGGACACAGAGACAAGAGACAGGGACAGGGACAC  950
      || |||||||||||||||||||||||||| ||||||| ||||||||||||
seq2  AG-AGATGGAGAGAGTCGGACACAGAGAC-AGAGACA-GGACAGGGACAC  945

seq1  AGAAAGACAGAGACAGAGAGACTGGAGAC  979
      |||||||| ||||||||||||||||||||
seq2  AGAAAGAC-GAGACAGAGAGACTGGAGAC  973