BAC Information

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BAC

Clone NameB6Ng01-033H07
Chromosome7 (Build37)
Map Location 95,026,261 - 95,027,375
singlet/doubletsinglet
Overlap geneGrm5
Upstream geneVmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4, Tyr
Downstream geneCtsc, LOC100039756, Rab38, LOC100039924, LOC666598, EG621562
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033H07.bB6Ng01-033H07.g
ACCDH862499DH862500
length1,1041,105
definitionDH862499|Mus musculus domesticus DNA, BAC clone: B6Ng01-033H07, 5' end.DH862500|Mus musculus domesticus DNA, BAC clone: B6Ng01-033H07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactggggaatactgaatggctgagaagcacctaaagaaatg
ttcaacatccttagccatcagggaaatgcaaatcaaaataaccttgagat
tccacctcacaccagtcagaatggctaagatcaataattcaggcgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgctggtg
ggattgcaagctggtacaaccactctggaaatcagtctgaagattcctca
gaaaattggacatattattacttgaggatccagggatatcactcctgggc
atatacccagaagatgctccaatatgtaataaggacacatgctccactat
gttcatagcagccttatttataatatccagaaggtggaaagaactcattt
gtctttcaacaaaggattgaatacagaaagtgtggtacatttacacaatg
gagtactactcagctattaaaaacaatgaagtcatgaagttcgtaggcat
atggatggaactagaaagtatcatcttgagtgaggtaacccaatcacaaa
agaacacacatggtatgcactcactaataagtagatattagcccagaaat
tcagaatacccaagatacatttcacagaccacaagctcaagaagaaggaa
gaccacagtgtggatactttggtctttcttagaagggggatcaaaatagc
cattgtaggagctacagaaacaaagtttagaacagaaactgaaggaaagg
acatccagtgactgtctcacctggggatccagcccatatacagttaccaa
acccagacactattttggatgctaacaagtgcttgctgacaggaacctga
tatagctgtctcctgggaggctctgccagtgcctgacaaatacagaagtg
ggtgcgcacagctatccattgtcctgagcacagggtcctcagtggaggag
ctagagaaagacgcaaggaactgagtggtttgcagcccataggaggacaa
catatgaactaaccagtaccccagagttcccaggtctaaccatcaaccaa
gagtacacaagggagaacttaagctctcgacaccatatgtgggaaacggc
atgt
gaattctttaagtgatgttgaaatattatattaggatccccatagtccct
gtgttttcattctgttgtgctaacatggttattagtagtgcttttagagg
tgaaaatagtcactctggccaagctatgtcagaatgatctactcgttttt
tagaagagaatgggtcaaatacttctggatatttatttaaacactatctt
ataaaaattatttttctatatttcccagagtattcctatgattgaggtag
cacctgggaaatacaaagatagagaaagaaaaaggttgtacaattaaaga
aatgcagttggaacccaggacttcattaatgttacagaattactctacta
tttgatctgtacccttagccctcttaacaggattcatagaaatagtattt
attgataacaattttactcaataccatttaaaatgtatttttaaaataat
aataacaatcttacctcaacttaacaaaacttgcctatgaggaaagtcct
ctggaagtattttattttaattgatagttctgtaaaatgtatctggctta
catatggttaaaaaatactagccaatgtataattctttcctacacattca
ataaagtcaaaattatcctcatgttgaaatgaagtaagaatgtaacagta
tcaaaacaaagggcagtatctttgattagcacacataaatactttatgaa
aatattaagaaactaaacacaacatcatacagaaaaggttattaaatgtg
atttatgatattcattctaccaatgcaatgatatctcaatataggcaaaa
taaacaaaaatagataaaattcaatatttcttcaaaaatattaattacta
tacaaaatatagaagtcacattttaatagccaaatctacttacagtatgc
caatattaatgtatattaaatatagaaaagctgaatgcttgctttcaaag
atggagaataagaatatatcctgctttatatttatatgtaacaatcatga
gccaccagcatttgttgatgaagtataaagattgatgacaggcatgtggt
ctactatacaaaactgtgctaccaggtacataagcctctgaaataagaaa
ggaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_95026261_95027375
seq2: B6Ng01-033H07.g_68_1172 (reverse)

seq1  ATTCCTTTCTCATTTCTGAAGGCTCTATGTTACCTGGTTGCAACAGTTTT  50
      |||||||||| ||||| | ||||| |||| |||||||| || |||| |||
seq2  ATTCCTTTCTTATTTCAG-AGGCT-TATG-TACCTGGTAGC-ACAG-TTT  45

seq1  TGCTTAGTAGACACAATGGCCTGTCATCACTCTTTATAACTTCATCAACA  100
      ||  |||||||| ||   ||||||||||| ||||||| ||||||||||||
seq2  TGTATAGTAGAC-CACATGCCTGTCATCAATCTTTAT-ACTTCATCAACA  93

seq1  AATGCTGGTGGCTCATGATTGTTACATATAAATATAAAGCAGGATATATT  150
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AATGCTGGTGGCTCATGATTGTTACATATAAATATAAAGCAGGATATA-T  142

seq1  TCTTATTCTCCATCTTTGAAAGCAAGCATTCAGCTTTTCTATATTTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTCTCCATCTTTGAAAGCAAGCATTCAGCTTTTCTATATTTAATA  192

seq1  TAACATTAAATATTGGCATACTGTAAGTAGATTTGGCTATTAAAATGTGA  250
      | ||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  T-ACATT-AATATTGGCATACTGTAAGTAGATTTGGCTATTAAAATGTGA  240

seq1  CTTCTATATTTTGTATAGTAATTAATATTTTTGAAG-AATATTGAATTTT  299
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTTCTATATTTTGTATAGTAATTAATATTTTTGAAGAAATATTGAATTTT  290

seq1  ATCTATTTTTGTTTATTTTGCCTATATTGAGATATCATTGCATTGGTAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTTTGTTTATTTTGCCTATATTGAGATATCATTGCATTGGTAGA  340

seq1  ATGAATATCATTAAATCACATTTAATAACCTTTTCTGTATGATGTTGTGT  399
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATCA-TAAATCACATTTAATAACCTTTTCTGTATGATGTTGTGT  389

seq1  TTAGTTTCTTAATATTTTCATAAAGTATTTATGTGTGCTAATCAAAGATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTCTTAATATTTTCATAAAGTATTTATGTGTGCTAATCAAAGATA  439

seq1  CTGCCCTTTGTTTTGATACTGTTACATTCTTACTTCATTTCAACATGAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTTTGTTTTGATACTGTTACATTCTTACTTCATTTCAACATGAGG  489

seq1  ATAATTTTGACTTTATTGAATGTGTAGGAAAGAATTATACATTGGCTAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTGACTTTATTGAATGTGTAGGAAAGAATTATACATTGGCTAGT  539

seq1  ATTTTTTAACCATATGTAAGCCAGATACATTTTACAGAACTATCAATTAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAACCATATGTAAGCCAGATACATTTTACAGAACTATCAATTAA  589

seq1  AATAAAATACTTCCAGAGGACTTTCCTCATAGGCAAGTTTTGTTAAGTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATACTTCCAGAGGACTTTCCTCATAGGCAAGTTTTGTTAAGTTG  639

seq1  AGGTAAGATTGTTATTATTATTTTAAAAATACATTTTAAATGGTATTGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGATTGTTATTATTATTTTAAAAATACATTTTAAATGGTATTGAG  689

seq1  TAAAATTGTTATCAATAAATACTATTTCTATGAATCCTGTTAAGAGGGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTGTTATCAATAAATACTATTTCTATGAATCCTGTTAAGAGGGCT  739

seq1  AAGGGTACAGATCAAATAGTAGAGTAATTCTGTAACATTAATGAAGTCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTACAGATCAAATAGTAGAGTAATTCTGTAACATTAATGAAGTCCT  789

seq1  GGGTTCCAACTGCATTTCTTTAATTGTACAACCTTTTTCTTTCTCTATCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCCAACTGCATTTCTTTAATTGTACAACCTTTTTCTTTCTCTATCT  839

seq1  TTGTATTTCCCAGGTGCTACCTCAATCATAGGAATACTCTGGGAAATATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTCCCAGGTGCTACCTCAATCATAGGAATACTCTGGGAAATATA  889

seq1  GAAAAATAATTTTTATAAGATAGTGTTTAAATAAATATCCAGAAGTATTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATAATTTTTATAAGATAGTGTTTAAATAAATATCCAGAAGTATTT  939

seq1  GACCCATTCTCTTCTAAAAAACGAGTAGATCATTCTGACATAGCTTGGCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCATTCTCTTCTAAAAAACGAGTAGATCATTCTGACATAGCTTGGCC  989

seq1  AGAGTGACTATTTTCACCTCTAAAAGCACTACTAATAACCATGTTAGCAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGACTATTTTCACCTCTAAAAGCACTACTAATAACCATGTTAGCAC  1039

seq1  AACAGAATGAAAACACAGGGACTATGGGGATCCTAATATAATATTTCAAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAATGAAAACACAGGGACTATGGGGATCCTAATATAATATTTCAAC  1089

seq1  ATCACTTAAAGAATTC  1115
      ||||||||||||||||
seq2  ATCACTTAAAGAATTC  1105