BAC Information

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BAC

Clone NameB6Ng01-033L15
Chromosome7 (Build37)
Map Location 65,897,111 - 66,056,636
singlet/doubletdoublet
Overlap geneAtp10a
Upstream geneGabrb3, EG668807, LOC434189
Downstream geneLOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1, LOC664788
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033L15.bB6Ng01-033L15.g
ACCDH862696DH862697
length1,111905
definitionDH862696|Mus musculus domesticus DNA, BAC clone: B6Ng01-033L15, 5' end.DH862697|Mus musculus domesticus DNA, BAC clone: B6Ng01-033L15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,897,111 - 65,898,225)(66,055,734 - 66,056,636)
sequence
gaattcatttcctggatttcactcaatataatattctgtgctttatttgt
gtttgtcagtgtatcttttaaaattgctaaatagtgtatacatataaaaa
tgcatacactcacacacacacacacacaccacacagtgttggctatagtg
taagaccaatggaaaaacagacaatgacttccacaacacatttgtctacc
tattcactcattgaggaagtaccctagtttctgacttccaggcatcttgt
taagagctgcaatgaacaagcctttcatttgttttatttttttgagatag
aatcttactctgtaggccatgcttggctgaaattcattagcctcaaactc
atggccatgaccccatctcaaggtcctcagtgctgagtttataggcatga
gccacaatgcttggcagtaagccttttgcgtgtgtgtattttcatttctc
cataatcgatgtctaaggctagagttaccagtcatgggaaagagctgtaa
aattcaatgtaaaagctgaaaactatcgtaggttttatgttctccactca
ctcttcctctatactcatcagcacttaacatcatttcttcctgtagccat
tcttgtatttgtgcacgtgtacctaaacctttgattttattttgaattta
tcatctttacttgaaaagttgagattggagtgtgagttgagttcagaagt
tcaagacctgccggagcattttaggaacatactatctctgttaaaaaata
aatacaattaatacctttttattaatgaagccacttgggctttttagcgc
tcttgtgctgtagtttttctcattggaaattccaggcaagcctgggctag
aataagactctatctcaaaaggtaaacaaaacaagattgttcagtaaact
gctttgtgtgcaacttttctatttgtctagtttgctacatatatttgctt
agagtcactcctatatttccctggtactattacatacctggtgactgtaa
tttctcttacctcttacttctaggtgcctttccatatattctaagcataa
agaaagttggtgacatttgcctagccattcttttgatttcggtggcacgt
gaataaattgt
gaattcactgtcttaaagtctttctaaagtggtgactccacgaaaccaca
ggcaagggcatcttgaggagcggtgacagaggaatagaagtcggtggcat
accgggaattgagccagtgtgtacagggcttcctttgaggcaggcattga
cacacagaaagtgaatgactcacacagggtggaagagccaggaagtccag
atgtgatgtttgattgaacagaggaatgtgaagacttgggtggcatgttg
ctacgcatctcacacccacttgttgtcacttcccaccgtggccagcaaga
cgaaaggacttggctatgtgctgatataatagcctctcttgccctgtcac
attcacttctggtaaagtgccgtgagctctttgaagaaagcgtgtgtctt
tcatccagcaaagagacctgggtaccctcctactgtcctcatgtgtacac
aggtcaggtggcctgttgcttcttggttactcctagccatctgtaacaag
tctgttcttctccacacctatcttatcttctcaaactaaaagctaaacaa
ttatgtagatggtcatgtgtccaggtgggtgagttcactggaattccagt
gctttgctacagctgctcctcctgttagctacagtctcaatcttgacatg
tgcagtatactttatacatccttcctatccaaaacaactgcaatacttcc
cagaggaaggtggagatccacacaaacaggtgatttctatttgttctact
tgccaggtgggcacttggagaattataagatacaactgtcatcacctagg
ccttccaggccttccagtatgtaaggaattgagctctgtcctttatctgc
tggtatctgcaggtggaggcttcttcctgaggcctaccctagggggtgga
cagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_65897111_65898225
seq2: B6Ng01-033L15.b_44_1154

seq1  GAATTCATTTCCTGGATTTCACTCAATATAATATTCTGTGCTTTATTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCCTGGATTTCACTCAATATAATATTCTGTGCTTTATTTGT  50

seq1  GTTTGTCAGTGTATCTTTTAAAATTGCTAAATAGTGTATACATATAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCAGTGTATCTTTTAAAATTGCTAAATAGTGTATACATATAAAAA  100

seq1  TGCATACACTCACACACACACACACACACCACACAGTGTTGGCTATAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACACTCACACACACACACACACACCACACAGTGTTGGCTATAGTG  150

seq1  TAAGACCAATGGAAAAACAGACAATGACTTCCACAACACATTTGTCTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACCAATGGAAAAACAGACAATGACTTCCACAACACATTTGTCTACC  200

seq1  TATTCACTCATTGAGGAAGTACCCTAGTTTCTGACTTCCAGGCATCTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACTCATTGAGGAAGTACCCTAGTTTCTGACTTCCAGGCATCTTGT  250

seq1  TAAGAGCTGCAATGAACAAGCCTTTCATTTGTTTTATTTTTTTGAGATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGCTGCAATGAACAAGCCTTTCATTTGTTTTATTTTTTTGAGATAG  300

seq1  AATCTTACTCTGTAGGCCATGCTTGGCTGAAATTCATTAGCCTCAAACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTACTCTGTAGGCCATGCTTGGCTGAAATTCATTAGCCTCAAACTC  350

seq1  ATGGCCATGACCCCATCTCAAGGTCCTCAGTGCTGAGTTTATAGGCATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCATGACCCCATCTCAAGGTCCTCAGTGCTGAGTTTATAGGCATGA  400

seq1  GCCACAATGCTTGGCAGTAAGCCTTTTGCGTGTGTGTATTTTCATTTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAATGCTTGGCAGTAAGCCTTTTGCGTGTGTGTATTTTCATTTCTC  450

seq1  CATAATCGATGTCTAAGGCTAGAGTTACCAGTCATGGGAAAGAGCTGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATCGATGTCTAAGGCTAGAGTTACCAGTCATGGGAAAGAGCTGTAA  500

seq1  AATTCAATGTAAAAGCTGAAAACTATCGTAGGTTTTATGTTCTCCACTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAATGTAAAAGCTGAAAACTATCGTAGGTTTTATGTTCTCCACTCA  550

seq1  CTCTTCCTCTATACTCATCAGCACTTAACATCATTTCTTCCTGTAGCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTCTATACTCATCAGCACTTAACATCATTTCTTCCTGTAGCCAT  600

seq1  TCTTGTATTTGTGCACGTGTACCTAAACC-TTGATTTTATTTTGAATTTA  649
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCTTGTATTTGTGCACGTGTACCTAAACCTTTGATTTTATTTTGAATTTA  650

seq1  TCATCTTTACTTGAAAAGTTGAGATTGGAGTGTGAGTTGAGTTCAGAAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTTACTTGAAAAGTTGAGATTGGAGTGTGAGTTGAGTTCAGAAGT  700

seq1  TCAAGACCTGCCGGAGCATTTTAGGAACATACTATCTCTGTTAAAAAATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACCTGCCGGAGCATTTTAGGAACATACTATCTCTGTTAAAAAATA  750

seq1  AATACAATTAATACC-TTTTATTAATGAAGCCACTTGGGCTTTTTAGCGC  798
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AATACAATTAATACCTTTTTATTAATGAAGCCACTTGGGCTTTTTAGCGC  800

seq1  TCTTGTGCTGTAGTTTTTCTCATTGTAAATTCCAGGCAAGCCTGGGCTAG  848
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCTTGTGCTGTAGTTTTTCTCATTGGAAATTCCAGGCAAGCCTGGGCTAG  850

seq1  AATAAGACTCTATCTCAAAAGGTAAAACAAAACAAGATTGTTCAGTAAAC  898
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AATAAGACTCTATCTCAAAAGGT-AAACAAAACAAGATTGTTCAGTAAAC  899

seq1  TGCTTTGTGTGCAACTTTTCTATTTGTCTAGTTTGCTACATATATTTGCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTGTGCAACTTTTCTATTTGTCTAGTTTGCTACATATATTTGCT  949

seq1  TAGAGTCACTCCTATATTTCCTTGGTACTATTTACATACCTGGTGACTGT  998
      ||||||||||||||||||||| |||||||| |||||||||||||||||||
seq2  TAGAGTCACTCCTATATTTCCCTGGTACTA-TTACATACCTGGTGACTGT  998

seq1  AATTCCTCTTACCCTCTAC-TCTTTGTGCCTTTCCCATATATTCTAAGCT  1047
      |||| ||||||||   ||| |||  |||||||| ||||||||||||||| 
seq2  AATTTCTCTTACCTCTTACTTCTAGGTGCCTTT-CCATATATTCTAAGC-  1046

seq1  ATATGGTAAGTTGGTGTACATTTGCTTAGCCCATCCTTTGATTTTGGTGG  1097
      |||  | ||||||||| |||||||| |||||  || |||||||| |||||
seq2  ATAAAGAAAGTTGGTG-ACATTTGCCTAGCCATTCTTTTGATTTCGGTGG  1095

seq1  CAGCGTGAAATAAATTGT  1115
      || |||| ||||||||||
seq2  CA-CGTG-AATAAATTGT  1111

seq1: chr7_66055734_66056636
seq2: B6Ng01-033L15.g_71_975 (reverse)

seq1  TCCTGTCCACCCCCTAGGGTAGGCCTCAGGAAGAAGCCTGCCACCTGCAG  50
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCCTGTCCACCCCCTAGGGTAGGCCTCAGGAAGAAGCCT-CCACCTGCAG  49

seq1  ATACCAGCAGAT-AAGGACAGAGCTCAAATTCCTTACATACTGGAAGGCC  99
      |||||||||||| ||||||||||||| |||||||||||||||||||||||
seq2  ATACCAGCAGATAAAGGACAGAGCTC-AATTCCTTACATACTGGAAGGCC  98

seq1  TGGAAGGCCTAGGTGATGACAGTTGTATCTTAT-ATTCTCCAAGTG-CCA  147
      ||||||||||||||||||||||||||||||||| |||||||||||| |||
seq2  TGGAAGGCCTAGGTGATGACAGTTGTATCTTATAATTCTCCAAGTGCCCA  148

seq1  CCTGGCAAGTAGAACAAATAGAAATCACCTGTTTGTGTGGATCTCCACCT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCAAGTAGAACAAATAGAAATCACCTGTTTGTGTGGATCTCCACCT  198

seq1  TCCTCTGGGAAGTATTGCAGTTGTTTTGGATAGGAAGGATGTAT-AAGTA  246
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCCTCTGGGAAGTATTGCAGTTGTTTTGGATAGGAAGGATGTATAAAGTA  248

seq1  TACTGCACATGTCAAGATTGAGACTGTAGCTAACAGGAGGAGCAGCTGTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCACATGTCAAGATTGAGACTGTAGCTAACAGGAGGAGCAGCTGTA  298

seq1  GCAAAGCACTGGAATTCCAGTGAACTCACCCACCTGGACACATGACCATC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCACTGGAATTCCAGTGAACTCACCCACCTGGACACATGACCATC  348

seq1  TACATAATTGTTTAGCTTTTAGTTTGAGAAGATAAGATAGGTGTGGAGAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAATTGTTTAGCTTTTAGTTTGAGAAGATAAGATAGGTGTGGAGAA  398

seq1  GAACAGACTTGTTACAGATGGCTAGGAGTAACCAAGAAGCAACAGGCCAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGACTTGTTACAGATGGCTAGGAGTAACCAAGAAGCAACAGGCCAC  448

seq1  CTGACCTGTGTACACATGAGGACAGTAGGAGGGTACCCAGGTCTCTTTGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTGTGTACACATGAGGACAGTAGGAGGGTACCCAGGTCTCTTTGC  498

seq1  TGGATGAAAGACACACGCTTTCTTCAAAGAGCTCACGGCACTTTACCAGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGAAAGACACACGCTTTCTTCAAAGAGCTCACGGCACTTTACCAGA  548

seq1  AGTGAATGTGACAGGGCAAGAGAGGCTATTATATCAGCACATAGCCAAGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATGTGACAGGGCAAGAGAGGCTATTATATCAGCACATAGCCAAGT  598

seq1  CCTTTCGTCTTGCTGGCCACGGTGGGAAGTGACAACAAGTGGGTGTGAGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCGTCTTGCTGGCCACGGTGGGAAGTGACAACAAGTGGGTGTGAGA  648

seq1  TGCGTAGCAACATGCCACCCAAGTCTTCACATTCCTCTGTTCAATCAAAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTAGCAACATGCCACCCAAGTCTTCACATTCCTCTGTTCAATCAAAC  698

seq1  ATCACATCTGGACTTCCTGGCTCTTCCACCCTGTGTGAGTCATTCACTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATCTGGACTTCCTGGCTCTTCCACCCTGTGTGAGTCATTCACTTT  748

seq1  CTGTGTGTCAATGCCTGCCTCAAAGGAAGCCCTGTACACACTGGCTCAAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTCAATGCCTGCCTCAAAGGAAGCCCTGTACACACTGGCTCAAT  798

seq1  TCCCGGTATGCCACCGACTTCTATTCCTCTGTCACCGCTCCTCAAGATGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGTATGCCACCGACTTCTATTCCTCTGTCACCGCTCCTCAAGATGC  848

seq1  CCTTGCCTGTGGTTTCGTGGAGTCACCACTTTAGAAAGACTTTAAGACAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCCTGTGGTTTCGTGGAGTCACCACTTTAGAAAGACTTTAAGACAG  898

seq1  TGAATTC  903
      |||||||
seq2  TGAATTC  905