BAC Information

Click to search

BAC

Clone NameB6Ng01-034B15
Chromosome7 (Build37)
Map Location 64,256,627 - 64,257,741
singlet/doubletsinglet
Overlap geneGabrg3
Upstream geneNipa1, LOC672959, Herc2, p, LOC100040839
Downstream geneGabra5, Gabrb3, EG668807, LOC434189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034B15.bB6Ng01-034B15.g
ACCDH862960DH862961
length1,0411,103
definitionDH862960|Mus musculus domesticus DNA, BAC clone: B6Ng01-034B15, 5' end.DH862961|Mus musculus domesticus DNA, BAC clone: B6Ng01-034B15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttacttctgagccccattttttaatggggttatttgatt
ttcgggagtccacctatttgagttctttatatatattggatattagtccc
ctatatgataggtaaagataggtaaagatccttttccaatcttttggtgg
cctttttgtcttattgacaatgtcttttgccttacagaagatttgcaatt
ttatgaggtcccatttgtcgattctcgatcttacagcacaagccattgct
tttctattcaggaatttttcccctgtgcccatatctttgaggcttttccc
cactttctcctctatatgtttcactgtctcaggttttctgtggagttcct
tgatccacttagatttgaccttagtacaaggagataagaatggatcaatt
ctcatttttctacttgataaccgccacttgtgccagcaccatttgttgaa
aatgctgtcttttttccactggatggttttagctcccttgtcaaagatca
agtgaccataggtgtgtgggttcatttctgggtcttcaattctattccat
tggtctagttgtctgtcactataccagtaccatgcagtttttatcacaat
tgctctgtagaacagctttaggccaggcatggtgattccaccagaggttc
ttttatccttgggaagagtatttgctatcctaggttttttgttattccag
atgaatctaccgattgccctttctaattcattgaagaattgagttggaat
tgtgatggggatgcattgaatctgtagattgcttttggcaagatagccag
ttttactatatgattctgccatccatgagcatggggagatcttttccatt
ttctgagatctctttaatttcttttcttcagtggacttgaagttcttatc
atacaggtctttcacttccttagttagagtcccaccaagtatttatatat
ttgtgactatgggagggtgtggtttccctaattccttccagccgttatct
tgggcacgaaggccatgactttttgagtaactaattcagca
gaattctctctcctccatgccacagagcccggaaagcaggatgagatcac
ctacttccaaaatcaaagactaggaactcggtatctggtgccagctttag
cctatagcactatgtcaactgccctagtcaacctccacacagcagacagg
cccattagaaaactccgaagctaaatgctctagagaaaagggaaaggacg
tgacaaaagcaaatttcaaacctgaccaaagctttgtgacatttatgctc
aagagccgtgtctgtagttcaggtttttttattttaaaattcacctgttc
ttatgctgagccttgcaatgcctaaacactcactctagtagttcatgaat
gtcttcctgtcacgtacactgccagaggcatgcctggtctgtgaacgtta
gtgcatacacgcactataatgatcacttcagacttgggtgattaagtaaa
ggtatgttgtaaccccgcggtagctgttattaaaatactcataacatttt
ctatattttgccttggcctttattaatccctcccactggctttgctcaca
ggaattaattacaactatgagataaatcaacatgtgcagttacatgaccc
tatgttgagctgtaagaggcagcctatggagctggtgaatgcagtagctg
aagagttctacatccgggtttgtagacggcaggaagagagagagagacat
tgggcctgctgaaggatttgaaacctcaaagcccaccaccagtgacacat
ttcttccgacaaagccacatctcctaatcctttcaaataccgtcactccc
taaacattcaaaatgttagggatatgaacctaaaggagatcactcttatt
caccatcatagataccgtgaccaagtcaactcgtttaaaagaaagcttta
attggtagctagattacacttttagggtagtacattatatggtgggaagc
atggcagcaggtaaggcaagcatgtgctaagaagcagtgggagctttgca
tcccatcctcagagggaagccagacagagagaaactgacctgttgaagcc
gcttttgaaatcccaaacccacacaatgataactcctccactaagatacc
ctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_64256627_64257741
seq2: B6Ng01-034B15.g_69_1171

seq1  GAATTCTCTCTCCTCCATGCCACAGAGCCCGGAAAGCAGGATGAGATCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCCTCCATGCCACAGAGCCCGGAAAGCAGGATGAGATCAC  50

seq1  CTACTTCCAAAATCAAAGACTAGGAACTCGGTATCTGGTGCCAGCTTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTCCAAAATCAAAGACTAGGAACTCGGTATCTGGTGCCAGCTTTAG  100

seq1  CCTATAGCACTATGTCAACTGCCCTAGTCAACCTCCACACAGCAGACAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAGCACTATGTCAACTGCCCTAGTCAACCTCCACACAGCAGACAGG  150

seq1  CCCATTAGAAAACTCCGAAGCTAAATGCTCTAGAGAAAAGGGAAAGGACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTAGAAAACTCCGAAGCTAAATGCTCTAGAGAAAAGGGAAAGGACG  200

seq1  TGACAAAAGCAAATTTCAAACCTGACCAAAGCTTTGTGACATTTATGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAAGCAAATTTCAAACCTGACCAAAGCTTTGTGACATTTATGCTC  250

seq1  AAGAGCCGTGTCTGTAGTTCAGGTTTTTTTATTTTAAAATTCACCTGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCCGTGTCTGTAGTTCAGGTTTTTTTATTTTAAAATTCACCTGTTC  300

seq1  TTATGCTGAGCCTTGCAATGCCTAAACACTCACTCTAGTAGTTCATGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTGAGCCTTGCAATGCCTAAACACTCACTCTAGTAGTTCATGAAT  350

seq1  GTCTTCCTGTCACGTACACTGCCAGAGGCATGCCTGGTCTGTGAACGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCCTGTCACGTACACTGCCAGAGGCATGCCTGGTCTGTGAACGTTA  400

seq1  GTGCATACACGCACTATAATGATCACTTCAGACTTGGGTGATTAAGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATACACGCACTATAATGATCACTTCAGACTTGGGTGATTAAGTAAA  450

seq1  GGTATGTTGTAACCCCGCGGTAGCTGTTATTAAAATACTCATAACATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGTTGTAACCCCGCGGTAGCTGTTATTAAAATACTCATAACATTTT  500

seq1  CTATATTTTGCCTTGGCCTTTATTAATCCCTCCCACTGGCTTTGCTCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTTTGCCTTGGCCTTTATTAATCCCTCCCACTGGCTTTGCTCACA  550

seq1  GGAATTAATTACAACTATGAGATAAATCAACATGTGCAGTTACATGACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTAATTACAACTATGAGATAAATCAACATGTGCAGTTACATGACCC  600

seq1  TATGTTGAGCTGTAAGAGGCAGCCTATGGAGCTGGTGAATGCAGTAGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGAGCTGTAAGAGGCAGCCTATGGAGCTGGTGAATGCAGTAGCTG  650

seq1  AAGAGTTCTACATCCGGGTTTGTAGACGGCAGGAAGAGAGAGAGAGACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTCTACATCCGGGTTTGTAGACGGCAGGAAGAGAGAGAGAGACAT  700

seq1  TGGGCCTGCTGAAGGATTTTGAAACCTCAAAGCCCACCACCAGTGACACA  750
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGGGCCTGCTGAAGGA-TTTGAAACCTCAAAGCCCACCACCAGTGACACA  749

seq1  TTTCTTCCGACAAAGCCACATCTCCTAATCCTTTCAAATACCGTCACTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCGACAAAGCCACATCTCCTAATCCTTTCAAATACCGTCACTCC  799

seq1  CTAAACATTCAAAATGTTAGGGATATGAACCT-AAGGAGATCACTCTTAT  849
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTAAACATTCAAAATGTTAGGGATATGAACCTAAAGGAGATCACTCTTAT  849

seq1  TCACCATCATAGATACCGTGACCAAGTCAACTCGTTTAAAAGAAAGCTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCACCATCATAGATACCGTGACCAAGTCAACTCGTTTAAAAGAAAGC-TT  898

seq1  TAATTGGTAAGCTAGATTACACTTTTAGGGTTAGTACATTATTATGGTGG  949
      |||||||| ||||||||||||||||||||| |||||||||| ||||||||
seq2  TAATTGGT-AGCTAGATTACACTTTTAGGG-TAGTACATTA-TATGGTGG  945

seq1  GAAGCATGGCAGCAGGTAAGGCAGGCATGGTGCTAAGAAGCAGTTGGGAG  999
      ||||||||||||||||||||||| |||| |||||||||||||| ||||||
seq2  GAAGCATGGCAGCAGGTAAGGCAAGCAT-GTGCTAAGAAGCAG-TGGGAG  993

seq1  CTTTGCATCCCAATCCTCAGAGAGAAGGCAGACAGAGAGAAACTGGACCT  1049
      ||||||||||| |||||||||| |||| |||||||||||||||| |||||
seq2  CTTTGCATCCC-ATCCTCAGAGGGAAGCCAGACAGAGAGAAACT-GACCT  1041

seq1  GTTGAAG-CGCTTTTGAAATCTCAAACCACACCAAATGGATATACTTCCT  1098
      ||||||| ||||||||||||| |||||| |||  ||||   |||  ||||
seq2  GTTGAAGCCGCTTTTGAAATCCCAAACC-CACACAATG---ATAACTCCT  1087

seq1  CCATCAAGGATACCCTG  1115
      ||| | | |||||||||
seq2  CCA-CTAAGATACCCTG  1103