BAC Information

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BAC

Clone NameB6Ng01-034F05
Chromosome7 (Build37)
Map Location 138,987,680 - 139,121,114
singlet/doubletdoublet
Overlap genenone
Upstream geneEG434249, Plekha1, Htra1, Dmbt1, 4933402N03Rik, 5430419D17Rik, LOC546006, LOC100043173, Cuzd1, 1700007K09Rik, 1700063I17Rik, 2310057M21Rik, Pstk, Ikzf5, Acadsb, Hmx3, Hmx2, Bub3, LOC677073, LOC100043679
Downstream geneGpr26, Cpxm2, 4631426J05Rik, LOC100043682, LOC100043683, Oat, Nkx1-2, 2310007H09Rik, A930008G19Rik, 2010208K18Rik, C430003P19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034F05.bB6Ng01-034F05.g
ACCDH863114DH863115
length1,097954
definitionDH863114|Mus musculus domesticus DNA, BAC clone: B6Ng01-034F05, 5' end.DH863115|Mus musculus domesticus DNA, BAC clone: B6Ng01-034F05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(138,987,680 - 138,988,833)(139,120,156 - 139,121,114)
sequence
gaattccacaggctataacacagtacattcatatttcctcttgtgccttt
tgtaatttttcttttaatttgaactagtattctctgcttactggagaatg
aggagacccggtttacctgctttgggcaattatcttggcacaagagtact
ctcttgggcaaccctgttttctactaataaaattattctttcggtgaatt
ttggctgtttaactccaagagaaaccttatggcctatttattcagctctt
tgtgtcttaacaatgaccaactattaaataccaacacaagtcatgtgctg
cagtaaataaatggtaggcaataaggcattcattttcccatctgacctcc
atcaccaaggccctgttgcagatactatttccatttggtttagagaggaa
ctgaaacacagggtagggccaaattcaaggtcacatggccatctaattca
catcaaagattgcaaggagcagagctagttctacactagcatggccgata
ggctgaatcctagcctggggacacagagatctgcatctgtgtatcctcca
agaagccagtcccattcttcttcattggccttcctagtgacactgccagc
ctggagctttgtccatcttcctctctgagctctaaactccgagtgaggag
attcaatcaacagagagtgccaggagacaaactcagagcttgataccaag
tccacttcctgagcctctgtctctcgccttgaagcccaatcctttgttgg
tgggaccagctcagttatgatcaacttccctctgtagaccatttcagaga
cagatgccaacaaaaatggggcaggacaggatagcccactgaatagacat
aaaagttttctagtttacttattagcacactgtgtatggatggagagcag
tttcaaaattgtctacatatgactataattttaagatgaaatgatctgac
tagaaatacataactacagtgctaaatttaagggtatcaatataatgctt
ttattatagccaattacaaacgtctaaattatgccgatctttaggacaat
cagccgttacttgccactatttgccattgactgatattaataagaga
gaattcttataggcagaacacctgtgatgtgagaataaacaactccagat
tttaaacacatgtgaagccagatgtggtggctaagcttataatcccagcc
ctcaggagacaggtgcaggcagactgtgaatttcaggccagcctaggcta
cacagcaagatcttgtctcacaaaagagagaaaaaaatgcatgaaatttg
aagaaataattcatgtaagatatgaacagcatatgcacccaccatacatc
acaatggtcaacagcatttatcacgagggagacagaaaacaccagcagca
cgatgtacctgctaaagtgtcaaaaaatttaaaaataaataaaaataaac
tgccactatcaagtgctgactagaacaacacgtgaatggagttgtatggc
tggtggaaatggaaaataaattggagcaaaattctatagtttctttacaa
attaaaaacacaggaattgtatgacccagccattgggttagctgtggata
tcagcatccacagagagatttttttttttttacatagagttcttggaaag
tttattcaccatgttcccaaatcagaatcacgtgactatctcacaggtag
aaggataaacaaactggggtggtcacatagtggagtattaccagggacta
aaaagtgactctgagaccttacatatttacgatttccagggagacataaa
gaaacatctgctcgaaagcaagttggggcaggagggcagggtaacagacc
aagaaaaggggggctaggattttataaagtccagctgggtagaccaatga
atttattagggtaaattacaggaacatgggaaactcgctagctgtcacat
cagaatattgtgccatcacagcaaagctgactcagagacactacccactg
gagaagaccatccccacccacccaactgcttgcccttgtataatatggag
gaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_138987680_138988833
seq2: B6Ng01-034F05.b_44_1140

seq1  GAATTCCACAGGCTATAACACAGTACATTCATATTTCCTCTTGTGCCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGGCTATAACACAGTACATTCATATTTCCTCTTGTGCCTTT  50

seq1  TGTAATTTTTCTTTTAATTTGAACTAGTATTCTCTGCTTACTGGAGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTTTTCTTTTAATTTGAACTAGTATTCTCTGCTTACTGGAGAATG  100

seq1  AGGAGACCCGGTTTACCTGCTTTGGGCAATTATCTTGGCACAAGAGTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACCCGGTTTACCTGCTTTGGGCAATTATCTTGGCACAAGAGTACT  150

seq1  CTCTTGGGCAACCCTGTTTTCTACTAATAAAATTATTCTTTCGGTGAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGGCAACCCTGTTTTCTACTAATAAAATTATTCTTTCGGTGAATT  200

seq1  TTGGCTGTTTAACTCCAAGAGAAACCTTATGGCCTATTTATTCAGCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGTTTAACTCCAAGAGAAACCTTATGGCCTATTTATTCAGCTCTT  250

seq1  TGTGTCTTAACAATGACCAACTATTAAATACCAACACAAGTCATGTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTTAACAATGACCAACTATTAAATACCAACACAAGTCATGTGCTG  300

seq1  CAGTAAATAAATGGTAGGCAATAAGGCATTCATTTTCCCATCTGACCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAATAAATGGTAGGCAATAAGGCATTCATTTTCCCATCTGACCTCC  350

seq1  ATCACCAAGGCCCTGTTGCAGATACTATTTCCATTTGGTTTAGAGAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCAAGGCCCTGTTGCAGATACTATTTCCATTTGGTTTAGAGAGGAA  400

seq1  CTGAAACACAGGGTAGGGCCAAATTCAAGGTCACATGGCCATCTAATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACACAGGGTAGGGCCAAATTCAAGGTCACATGGCCATCTAATTCA  450

seq1  CATCAAAGATTGCAAGGAGCAGAGCTAGTTCTACACTAGCATGGCCGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAAGATTGCAAGGAGCAGAGCTAGTTCTACACTAGCATGGCCGATA  500

seq1  GGCTGAATCCTAGCCTGGGGACACAGAGATCTGCATCTGTGTATCCTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAATCCTAGCCTGGGGACACAGAGATCTGCATCTGTGTATCCTCCA  550

seq1  AGAAGCCAGTCCCATTCTTCTTCATTGGCCTTCCTAGTGACACTGCCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCAGTCCCATTCTTCTTCATTGGCCTTCCTAGTGACACTGCCAGC  600

seq1  CTGGAGCTTTGTCCATCTTCCTCTCTGAGCTCTAAACTCCGAGTGAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCTTTGTCCATCTTCCTCTCTGAGCTCTAAACTCCGAGTGAGGAG  650

seq1  ATTCAATCAACAGAGAGTGCCAGGAGACAAACTCAAGAGCTTGATACCAA  700
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATTCAATCAACAGAGAGTGCCAGGAGACAAACTC-AGAGCTTGATACCAA  699

seq1  GTCCACTTCCTGAGCCTCTGTCTCTCGCCTTGAAGCCCAATCCTTTGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACTTCCTGAGCCTCTGTCTCTCGCCTTGAAGCCCAATCCTTTGTTG  749

seq1  GTGGGACCAGCTCAGTTATGATCAACTTCCCTCTGTAGACCATTTCAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTGGGACCAGCTCAGTTATGATCAACTTCCCTCTGTAGACCATTTCA-GA  798

seq1  GACAGATGCCAACAAAAAAATGGGGCAGGACAGGATAGCCCACTGAAATA  850
      |||||||||||||  |||||||||||||||||||||||||||||| ||||
seq2  GACAGATGCCAAC--AAAAATGGGGCAGGACAGGATAGCCCACTG-AATA  845

seq1  AGAACATAAAAGTTTTCTAGTTTACTTATTAGCACACTGTGTAATTGGAT  900
         ||||||||||||||||||||||||||||||||||||||||  |||||
seq2  --GACATAAAAGTTTTCTAGTTTACTTATTAGCACACTGTGTA--TGGAT  891

seq1  GGAAGGAGCAGGTTTCAAAAATTTGTCTTACCATAATGACTATAATTTTT  950
      |||  ||||| |||||||||  ||||||   ||| |||||||||||||| 
seq2  GGA--GAGCA-GTTTCAAAA--TTGTCT--ACAT-ATGACTATAATTTT-  932

seq1  TAAAGATTGAAAATGAATCTGACTAGAAAATACCATTAAACTACCAAGTT  1000
        |||||   ||||| |||||||||| ||||| |||  ||||||  || |
seq2  --AAGAT--GAAATG-ATCTGACTAG-AAATA-CAT--AACTAC--AG-T  970

seq1  GCTTAAAATTTAAAGGGTAATTCACATATAATGCTTTTATTTAATAGCCC  1050
      |||  |||||| |||||||  ||| ||||||||||||||||  |||||| 
seq2  GCT--AAATTT-AAGGGTA--TCA-ATATAATGCTTTTATT--ATAGCC-  1011

seq1  AATTTACAAAACGTCTAAAATTAATGCAGATCTTTTCAGGACAAAATCAG  1100
       | |||| |||||||||||  | |||| |||||||  |||||  ||||||
seq2  -AATTAC-AAACGTCTAAA--TTATGCCGATCTTT--AGGAC--AATCAG  1053

seq1  CTGTAACTGCACCAACTAATTTTTGCTCATTTGAACTGAATTATTAATAA  1150
      | || |||    | ||||   ||||| ||||   |||||  |||||||||
seq2  CCGTTACT--TGCCACTA---TTTGC-CATT--GACTGA--TATTAATAA  1093

seq1  GAGA  1154
      ||||
seq2  GAGA  1097

seq1: chr7_139120156_139121114
seq2: B6Ng01-034F05.g_72_1025 (reverse)

seq1  CTTCCTCCATATTATACAAGGGGCAAGCAGTTGGGTGGGGTGGGGGATGG  50
      ||||||||||||||||||| |||||||||||||||||||   ||||||||
seq2  CTTCCTCCATATTATACAA-GGGCAAGCAGTTGGGTGGG--TGGGGATGG  47

seq1  GTCTCTCCAGTGGTGTAGTTGTCTCTGAGTCAGCTTTGCTGTGATTGGCA  100
         |||||||||| |||| ||||||||||||||||||||||||| |||||
seq2  TCTTCTCCAGTGG-GTAG-TGTCTCTGAGTCAGCTTTGCTGTGA-TGGCA  94

seq1  CATTTTTCTGATGTGACAGCTAGCGAGTTTCCCATGTTCCTGTAATTTAC  150
      || | |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTCTGATGTGACAGCTAGCGAGTTTCCCATGTTCCTGTAATTTAC  144

seq1  CCTAATAAATTCATTGGTCTACCCAGCTGGACTTTATAAAATCCTAGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATAAATTCATTGGTCTACCCAGCTGGACTTTATAAAATCCTAGCCC  194

seq1  CCCTTTTCTTGGTCTGTTACCCTGCCCTCCTGCCCCAACTTGCTTTCGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTCTTGGTCTGTTACCCTGCCCTCCTGCCCCAACTTGCTTTCGAG  244

seq1  CAGATGTTTCTTTATGTCTCCCTGGAAATCGT-AATATGTAAGGTCTCAG  299
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAGATGTTTCTTTATGTCTCCCTGGAAATCGTAAATATGTAAGGTCTCAG  294

seq1  AGTCACTTTTTAGTCCCTGGTAATACTCCACTATGTGACCACCCCAGTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTTTTTAGTCCCTGGTAATACTCCACTATGTGACCACCCCAGTTT  344

seq1  GTTTATCCTTCTACCTGTGAGATAGTCACGTGATTCTGATTTGGGAACAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCCTTCTACCTGTGAGATAGTCACGTGATTCTGATTTGGGAACAT  394

seq1  GGTGAATAAACTTTCCAAGAACTCTATGTAAAAAAAAAAAAATCTCTCTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAATAAACTTTCCAAGAACTCTATGTAAAAAAAAAAAAATCTCTCTG  444

seq1  TGGATGCTGATATCCACAGCTAACCCAATGGCTGGGTCATACAATTCCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGCTGATATCCACAGCTAACCCAATGGCTGGGTCATACAATTCCTG  494

seq1  TGTTTTTAATTTGTAAAGAAACTATAGAATTTTGCTCCAATTTATTTTCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTAATTTGTAAAGAAACTATAGAATTTTGCTCCAATTTATTTTCC  544

seq1  ATTTCCACCAGCCATACAACTCCATTCACGTGTTGTTCTAGTCAGCACTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCACCAGCCATACAACTCCATTCACGTGTTGTTCTAGTCAGCACTT  594

seq1  GATAGTGGCAGTTTATTTTTATTTATTTTTAAATTTTTTGACACTTTAGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTGGCAGTTTATTTTTATTTATTTTTAAATTTTTTGACACTTTAGC  644

seq1  AGGTACATCGTGCTGCTGGTGTTTTCTGTCTCCCTCGTGATAAATGCTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACATCGTGCTGCTGGTGTTTTCTGTCTCCCTCGTGATAAATGCTGT  694

seq1  TGACCATTGTGATGTATGGTGGGTGCATATGCTGTTCATATCTTACATGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATTGTGATGTATGGTGGGTGCATATGCTGTTCATATCTTACATGA  744

seq1  ATTATTTCTTCAAATTTCATGCATTTTTTTCTCTCTTTTGTGAGACAAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTCTTCAAATTTCATGCATTTTTTTCTCTCTTTTGTGAGACAAGA  794

seq1  TCTTGCTGTGTAGCCTAGGCTGGCCTGAAATTCACAGTCTGCCTGCACCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTGTGTAGCCTAGGCTGGCCTGAAATTCACAGTCTGCCTGCACCT  844

seq1  GTCTCCTGAGGGCTGGGATTATAAGCTTAGCCACCACATCTGGCTTCACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTGAGGGCTGGGATTATAAGCTTAGCCACCACATCTGGCTTCACA  894

seq1  TGTGTTTAAAATCTGGAGTTGTTTATTCTCACATCACAGGTGTTCTGCCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTAAAATCTGGAGTTGTTTATTCTCACATCACAGGTGTTCTGCCT  944

seq1  ATAAGAATTC  959
      ||||||||||
seq2  ATAAGAATTC  954