BAC Information

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BAC

Clone NameB6Ng01-035L09
Chromosome7 (Build37)
Map Location 74,168,321 - 74,287,732
singlet/doubletdoublet
Overlap geneAdamts17
Upstream genePcsk6, Snrpa1, H47, Chsy1, Lrrk1, Aldh1a3, Asb7, Lins2, Lass3
Downstream geneLysmd4, Mef2a, EG665304, Lrrc28, Ttc23, Dmn, LOC665319, LOC100041771, Igf1r
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035L09.bB6Ng01-035L09.g
ACCDH864107DH864108
length1,0431,007
definitionDH864107|Mus musculus domesticus DNA, BAC clone: B6Ng01-035L09, 5' end.DH864108|Mus musculus domesticus DNA, BAC clone: B6Ng01-035L09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,286,654 - 74,287,732)(74,168,321 - 74,169,345)
sequence
gaattccattcttgtgacctcccctgaggccctagacttaattaaacagg
gaagagatgacaggcgctcctgatagcataggggttttgcctcaagtcgt
gctatgaaagccatttttttttcaggcttttacaacgtaagcaaacacat
ctataaaaacagatctggtcttgtttgaagctctctccaggctgcccccg
accccccttttaaagtggctcatttcatcagtatttaatgtggctccccg
agatgcacttaaaccgagacagaagtaaaccagccataaatccacgcagg
gaagctcgtccttaggccctgtgaaggacagctctcttcctgtctcttct
ggaacaaatagctacaaagcacactgtctgctgcctggtgaccacactgt
cagtcggggcaggaaaggcaggaatcaaagacacctgagacagaggtgcc
agggtgggaggcacaatagtgaaataaagatgttatgggctggagctgtt
gttcggaggtaaagcatttgcttagcatgcaggaggacaacctggctttc
atcctcacccacagcataataaaaaaaaaacccaaaaaaccaaaaaaacc
aaaaaacaaaaaatgaaacaagaaactaaaaacaccccaccccaacaacg
gaagtcaggatgcagacccacaaggcaaaaagggagattaaacgtggatt
ttcttcataggcttttaaaggacagtacaaagggactaggaaaaagggat
ttctctttgggtaaagagttttaggcaatcaggaggaaacaggttacact
gtgcatcacagtattgcttggcatctttcaaagacagtaattgtaatagc
attacagtaggacccgcctgtgacagtgtccgggcttaggatgtcctgtt
agtctcacactacagctaataccagtagctatgtgctgcgcacagtagcg
ctcataatgtgctgtagaatgagtgcatcttccgagcaggggtgagctga
gcagcaggatagtcagtccactgctgccagagcttgcctgtga
gaattccatgacagccagggttacacagagaaaccctgtctcgaaaaaca
aaacaaaaaacaaacaaacaaaaaaaaagtgtcttgatggcctggagaga
tggctcagaggttaagagcactgactgctcttctagaagtcttgagttca
attcccagcaaccacatggtggctcacaaccatctgtaatggaatttgat
gccctcttccattgtgtctgaagacagctactgtgtactcatatacataa
aataaataaataagtcttttaaaaagatgagtcttgacatgcttgtttta
agctggaacttttcttatcaattctgttatttacatctcttgtatcaatt
attacatgactgttgaatttttcatgggctaagaaagaccattaaattat
tatactaatttcttttttgttgcttacccttatatcccaagtcagttttg
tttaatgaaatttaatactatgtactttttggggcatagatactacatgg
ccatcgagggtcatatatccttatattatttcatgcctcaggctcagggt
tcaagttggactgacattagaattgatgttctcctttgcctttattttgg
cttccaaatcacattaaatgattgttacacagcacatagcagagcttaag
ttgtgatctaatatgaaggatttatcttaggaaacaaggttagctcattt
gtttctatgtcagatgattcttggtgtaggttctgtttttctggtttttt
tttttttgttgttgtttttttttttttttctggcttctcttgcttttctg
ttagcgtttcttttgaagaagtttgggactctttcagtgatctctctata
cacattgtaataaaaattaatcctcatgtttttattcttagacacgtacg
aaaatatttcttgtctttgatgttggaaaagtactaaaaaaatgatctgt
gtttgtcactattgtgtctacaaacttccaaaaatatgcatttaacaaac
gtactat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_74286654_74287732
seq2: B6Ng01-035L09.b_47_1089 (reverse)

seq1  TCACAGGGCAGAGCCTCTGAGCAGCAGTGGGGCCTGACTACTCCCTGCTG  50
      |||||||  ||   ||||| ||||||||  || |||||||   |||||| 
seq2  TCACAGGCAAG---CTCTG-GCAGCAGT--GGACTGACTA--TCCTGCT-  41

seq1  GCTCAAGGCTCACCCCCTGCCTCTGAAAGATGGCACCTCATTTCCTACAG  100
      |||||  ||||| |||||| ||| | ||||| ||| ||||||  ||||| 
seq2  GCTCA--GCTCA-CCCCTG-CTC-GGAAGAT-GCA-CTCATT--CTACA-  81

seq1  GCACATTTATTGAGCGCCTACTGTGCGCCAAGCACATTAGGCTACTGGTT  150
      |||||||   |||||| |||||||||||  |||||||   |||||||| |
seq2  GCACATT--ATGAGCG-CTACTGTGCGC--AGCACAT--AGCTACTGG-T  123

seq1  ATTAGCTGTTAGTGTGAGAACTAACAAGAACATCCCTAAGCCCCGGACAC  200
      |||||||| ||||||||| |||||| || |||| |||||| |||||||||
seq2  ATTAGCTG-TAGTGTGAG-ACTAAC-AGGACAT-CCTAAG-CCCGGACAC  168

seq1  TGTCAACAGGCGGGTCCTACTGTAATGGCTATTACAATTACTGTCTTTTG  250
      |||| ||||||||||||||||||||| |||||||||||||||||| ||||
seq2  TGTC-ACAGGCGGGTCCTACTGTAAT-GCTATTACAATTACTGTC-TTTG  215

seq1  AAAGATGCCAAGCAATACTGTTGATGCACAGTGTAACCTGTTTCCTCCTG  300
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAAGATGCCAAGCAATACTG-TGATGCACAGTGTAACCTGTTTCCTCCTG  264

seq1  ATTGCCTAAAACTCTTTACCCAAAGAGAAATCCCTTTTTCCTAGTCCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTAAAACTCTTTACCCAAAGAGAAATCCCTTTTTCCTAGTCCCTT  314

seq1  TGTACTGTCCTTTAAAAGCCTATGAAGAAAATCCACGTTTAATCTCCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGTCCTTTAAAAGCCTATGAAGAAAATCCACGTTTAATCTCCCTT  364

seq1  TTTGCCTTGTGGGTCTGCATCCTGACTTCCGTTGTTGGGGTGGGGTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTGTGGGTCTGCATCCTGACTTCCGTTGTTGGGGTGGGGTGTTT  414

seq1  TTAGTTTCTTGTTTCATTTTTTGTTTTTTGGTTTTTTTGGTTTTTTGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTCTTGTTTCATTTTTTGTTTTTTGGTTTTTTTGGTTTTTTGGGT  464

seq1  TTTTTTTTTATTATGCTGTGGGTGAGGATGAAAGCCAGGTTGTCCTCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTATTATGCTGTGGGTGAGGATGAAAGCCAGGTTGTCCTCCTG  514

seq1  CATGCTAAGCAAATGCTTTACCTCCGAACAACAGCTCCAGCCCATAACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTAAGCAAATGCTTTACCTCCGAACAACAGCTCCAGCCCATAACAT  564

seq1  CTTTATTTCACTATTGTGCCTCCCACCCTGGCACCTCTGTCTCAGGTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTCACTATTGTGCCTCCCACCCTGGCACCTCTGTCTCAGGTGTC  614

seq1  TTTGATTCCTGCCTTTCCTGCCCCGACTGACAGTGTGGTCACCAGGCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTCCTGCCTTTCCTGCCCCGACTGACAGTGTGGTCACCAGGCAGC  664

seq1  AGACAGTGTGCTTTGTAGCTATTTGTTCCAGAAGAGACAGGAAGAGAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTGTGCTTTGTAGCTATTTGTTCCAGAAGAGACAGGAAGAGAGCT  714

seq1  GTCCTTCACAGGGCCTAAGGACGAGCTTCCCTGCGTGGATTTATGGCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCACAGGGCCTAAGGACGAGCTTCCCTGCGTGGATTTATGGCTGG  764

seq1  TTTACTTCTGTCTCGGTTTAAGTGCATCTCGGGGAGCCACATTAAATACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTCTGTCTCGGTTTAAGTGCATCTCGGGGAGCCACATTAAATACT  814

seq1  GATGAAATGAGCCACTTTAAAAGGGGGGTCGGGGGCAGCCTGGAGAGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAATGAGCCACTTTAAAAGGGGGGTCGGGGGCAGCCTGGAGAGAGC  864

seq1  TTCAAACAAGACCAGATCTGTTTTTATAGATGTGTTTGCTTACGTTGTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAAGACCAGATCTGTTTTTATAGATGTGTTTGCTTACGTTGTAA  914

seq1  AAGCCTGAAAAAAAAATGGCTTTCATAGCACGACTTGAGGCAAAACCCCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGAAAAAAAAATGGCTTTCATAGCACGACTTGAGGCAAAACCCCT  964

seq1  ATGCTATCAGGAGCGCCTGTCATCTCTTCCCTGTTTAATTAAGTCTAGGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATCAGGAGCGCCTGTCATCTCTTCCCTGTTTAATTAAGTCTAGGG  1014

seq1  CCTCAGGGGAGGTCACAAGAATGGAATTC  1079
      |||||||||||||||||||||||||||||
seq2  CCTCAGGGGAGGTCACAAGAATGGAATTC  1043

seq1: chr7_74168321_74169345
seq2: B6Ng01-035L09.g_67_1073

seq1  GAATTCCATGACAGCCAGGGTTACACAGAGAAACCCTGTCTCGAAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGACAGCCAGGGTTACACAGAGAAACCCTGTCTCGAAAAACA  50

seq1  AAACAAAAAACAAACAAACAAAAAAAAAGTGTCTTGATGGCCTGGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAAACAAACAAACAAAAAAAAAGTGTCTTGATGGCCTGGAGAGA  100

seq1  TGGCTCAGAGGTTAAGAGCACTGACTGCTCTTCTAGAAGTCTTGAGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAGAGGTTAAGAGCACTGACTGCTCTTCTAGAAGTCTTGAGTTCA  150

seq1  ATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGAATTTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGAATTTGAT  200

seq1  GCCCTCTTCCATTGTGTCTGAAGACAGCTACTGTGTACTCATATACATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTTCCATTGTGTCTGAAGACAGCTACTGTGTACTCATATACATAA  250

seq1  AATAAATAAATAAGTCTTTTAAAAAGATGAGTCTTGACATGCTTGTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATAAGTCTTTTAAAAAGATGAGTCTTGACATGCTTGTTTTA  300

seq1  AGCTGGAACTTTTCTTATCAATTCTGTTATTTACATCTCTTGTATCAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGAACTTTTCTTATCAATTCTGTTATTTACATCTCTTGTATCAATT  350

seq1  ATTACATGACTGTTGAATTTTTCATGGGCTAAGAAAGACCATTAAATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATGACTGTTGAATTTTTCATGGGCTAAGAAAGACCATTAAATTAT  400

seq1  TATACTAATTTCTTTTTTGTTGCTTACCCTTATATCCCAAGTCAGTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTAATTTCTTTTTTGTTGCTTACCCTTATATCCCAAGTCAGTTTTG  450

seq1  TTTAATGAAATTTAATACTATGTACTTTTTGGGGCATAGATACTACATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGAAATTTAATACTATGTACTTTTTGGGGCATAGATACTACATGG  500

seq1  CCATCGAGGGTCATATATCCTTATATTATTTCATGCCTCAGGCTCAGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCGAGGGTCATATATCCTTATATTATTTCATGCCTCAGGCTCAGGGT  550

seq1  TCAAGTTGGACTGACATTAGAATTGATGTTCTCCTTTGCCTTTATTTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTGGACTGACATTAGAATTGATGTTCTCCTTTGCCTTTATTTTGG  600

seq1  CTTCCAAATCACATTAAATGATTGTTACACAGCACATAGCAGAGCTTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAATCACATTAAATGATTGTTACACAGCACATAGCAGAGCTTAAG  650

seq1  TTGTGATCTAATATGAAGGATTTATCTTAGGAAACAAGGTTAGCTCATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATCTAATATGAAGGATTTATCTTAGGAAACAAGGTTAGCTCATTT  700

seq1  GTTTCTATGTCAGATGATTCTTGGTGTAGGTTCTGTTTTTCTGGTTTTTT  750
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTTTCTATGTCAGATGATTCTTGGTGTAGGTTCTGTTTTTCTGG-TTTTT  749

seq1  TTTTTTTTGTTGTTGTTTTTTTTTTTTTTTTCTGGCTTCTCTTGCTTTTC  800
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTGTTGTTG-TTTTTTTTTTTTTTTCTGGCTTCTCTTGCTTTTC  798

seq1  TGTTAGCGTTTCTTTTGTAGAAGTTTGGGACTCTTTCCAGTGATCTCCTC  850
      ||||||||||||||||| |||||||||||||||||| ||||||||| |||
seq2  TGTTAGCGTTTCTTTTGAAGAAGTTTGGGACTCTTT-CAGTGATCT-CTC  846

seq1  TATTACACATTGTATATAAAATTAATCCTCCATGTTTTTATTCTCTAGAC  900
      || |||||||||||   |||||||||||| |||||||||||||| |||||
seq2  TA-TACACATTGTAATAAAAATTAATCCT-CATGTTTTTATTCT-TAGAC  893

seq1  ACGTACGAAAATATCTCTTGTCTTTGATGTTTGGAAAAGTACTAAAAAAT  950
      |||||||||||||| |||||||||||||| ||||||||||||||||||| 
seq2  ACGTACGAAAATATTTCTTGTCTTTGATG-TTGGAAAAGTACTAAAAAAA  942

seq1  GTATCTGTGTTTGTTCACTATTGTGTCTTAACAAACTTCCACAAAATATG  1000
        ||||||||||| ||||||||||||||  ||||||||||| ||||||||
seq2  TGATCTGTGTTTG-TCACTATTGTGTCT--ACAAACTTCCA-AAAATATG  988

seq1  GCCATTTTAAACAAAACGTATCTAT  1025
        |||||  ||| ||||||| ||||
seq2  --CATTT--AAC-AAACGTA-CTAT  1007